RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 EN1Q05925 392 aaPredicted RBP7.49□□□□□ -1.21
CASC3-202ENST00000394114 ARHGEF25Q86VW2 580 aa7.49□□□□□ -1.21
CASC3-202ENST00000394114 AXIN2Q9Y2T1 843 aa7.49□□□□□ -1.21
CASC3-202ENST00000394114 ALS2Q96Q42 1657 aa7.49□□□□□ -1.21
CASC3-202ENST00000394114 CHRNA2Q15822 529 aa7.49□□□□□ -1.21
CASC3-202ENST00000394114 SPIRE2Q8WWL2 714 aa7.49□□□□□ -1.21
CASC3-202ENST00000394114 MBIPQ9NS73 344 aa7.49□□□□□ -1.21
CASC3-202ENST00000394114 SMC4Q9NTJ3 1288 aa7.49□□□□□ -1.21
CASC3-202ENST00000394114 MIS18AQ9NYP9 233 aa7.49□□□□□ -1.21
CASC3-202ENST00000394114 MED1Q15648 1581 aaPredicted RBP7.49□□□□□ -1.21
CASC3-202ENST00000394114 KDRP35968 1356 aa7.49□□□□□ -1.21
CASC3-202ENST00000394114 LMOD3Q0VAK6 560 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 SSH1Q8WYL5 1049 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 RTL1A6NKG5 1358 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 KIF24Q5T7B8 1368 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 USP19O94966 1318 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 EVI5O60447 810 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 GNAI1P63096 354 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 FGD1P98174 961 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 QPCTQ16769 361 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 FAM161AQ3B820 660 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 TAF7LQ5H9L4 462 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 TSPYL6Q8N831 410 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 PXYLP1Q8TE99 480 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 SLIT3O75094 1523 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 LILRB3O75022 631 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 CALD1Q05682 793 aaKnown RBP7.48□□□□□ -1.21
CASC3-202ENST00000394114 KRT24Q2M2I5 525 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 ANKRD24Q8TF21 1146 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 IFT57Q9NWB7 429 aa7.48□□□□□ -1.21
CASC3-202ENST00000394114 PXDNQ92626 1479 aa7.47□□□□□ -1.21
CASC3-202ENST00000394114 TNS3Q68CZ2 1445 aa7.47□□□□□ -1.21
CASC3-202ENST00000394114 RLBP1P12271 317 aa7.47□□□□□ -1.21
CASC3-202ENST00000394114 RSBN1LQ6PCB5 846 aaPredicted RBP7.47□□□□□ -1.21
CASC3-202ENST00000394114 RTF1Q92541 710 aaKnown RBP7.47□□□□□ -1.21
CASC3-202ENST00000394114 SPATA31A3Q5VYP0 1347 aa7.47□□□□□ -1.21
CASC3-202ENST00000394114 VAC14Q08AM6 782 aa7.47□□□□□ -1.21
CASC3-202ENST00000394114 PHLDB3Q6NSJ2 640 aa7.47□□□□□ -1.21
CASC3-202ENST00000394114 C8orf58Q8NAV2 365 aa7.47□□□□□ -1.21
CASC3-202ENST00000394114 MAFBQ9Y5Q3 323 aaPredicted RBP7.47□□□□□ -1.21
CASC3-202ENST00000394114 ZNF853P0CG23 659 aa7.46□□□□□ -1.21
CASC3-202ENST00000394114 TSR1Q2NL82 804 aaKnown RBP7.46□□□□□ -1.21
CASC3-202ENST00000394114 SKAP1Q86WV1 359 aa7.46□□□□□ -1.21
CASC3-202ENST00000394114 VAMP1P23763 118 aa7.46□□□□□ -1.22
CASC3-202ENST00000394114 DPY19L2Q6NUT2 758 aa7.46□□□□□ -1.22
CASC3-202ENST00000394114 GAS2L2Q8NHY3 880 aa7.46□□□□□ -1.22
CASC3-202ENST00000394114 NLRP2Q9NX02 1062 aa7.46□□□□□ -1.22
CASC3-202ENST00000394114 PHRF1Q9P1Y6 1649 aaKnown RBP7.46□□□□□ -1.22
CASC3-202ENST00000394114 ELOAQ14241 798 aaKnown RBP7.45□□□□□ -1.22
CASC3-202ENST00000394114 TWISTNBQ3B726 338 aaPredicted RBP7.45□□□□□ -1.22
CASC3-202ENST00000394114 KIAA0232Q92628 1395 aa7.45□□□□□ -1.22
CASC3-202ENST00000394114 GNAT3A8MTJ3 354 aa7.45□□□□□ -1.22
CASC3-202ENST00000394114 GJA5P36382 358 aa7.45□□□□□ -1.22
CASC3-202ENST00000394114 FTSJ3Q8IY81 847 aaKnown RBP7.45□□□□□ -1.22
CASC3-202ENST00000394114 GIPC2Q8TF65 315 aa7.45□□□□□ -1.22
CASC3-202ENST00000394114 UBXN4Q92575 508 aa7.45□□□□□ -1.22
CASC3-202ENST00000394114 L3MBTL3Q96JM7 780 aaPredicted RBP7.45□□□□□ -1.22
CASC3-202ENST00000394114 CWC22Q9HCG8 908 aaKnown RBP7.45□□□□□ -1.22
CASC3-202ENST00000394114 NOB1Q9ULX3 412 aaKnown RBP7.45□□□□□ -1.22
CASC3-202ENST00000394114 ERBB3P21860 1342 aa7.45□□□□□ -1.22
CASC3-202ENST00000394114 VAMP4O75379 141 aa7.44□□□□□ -1.22
CASC3-202ENST00000394114 CT47B1P0C2W7 299 aaPredicted RBP7.44□□□□□ -1.22
CASC3-202ENST00000394114 TRIM27P14373 513 aa7.44□□□□□ -1.22
CASC3-202ENST00000394114 PDE3AQ14432 1141 aa7.44□□□□□ -1.22
CASC3-202ENST00000394114 RTL5Q5HYW3 569 aaPredicted RBP7.44□□□□□ -1.22
CASC3-202ENST00000394114 ZKSCAN2Q63HK3 967 aa7.44□□□□□ -1.22
CASC3-202ENST00000394114 MAP3K7O43318 606 aa7.44□□□□□ -1.22
CASC3-202ENST00000394114 CSPP1Q1MSJ5 1256 aa7.44□□□□□ -1.22
CASC3-202ENST00000394114 IL17REQ8NFR9 667 aa7.44□□□□□ -1.22
CASC3-202ENST00000394114 TSPYL4Q9UJ04 414 aa7.44□□□□□ -1.22
CASC3-202ENST00000394114 ADGRG1Q9Y653 693 aa7.44□□□□□ -1.22
CASC3-202ENST00000394114 CRB1P82279 1406 aa7.44□□□□□ -1.22
CASC3-202ENST00000394114 SOS2Q07890 1332 aaPredicted RBP7.44□□□□□ -1.22
CASC3-202ENST00000394114 MAP3K5Q99683 1374 aa7.43□□□□□ -1.22
CASC3-202ENST00000394114 CHL1O00533 1208 aa7.43□□□□□ -1.22
CASC3-202ENST00000394114 ZNF530Q6P9A1 599 aaPredicted RBP7.43□□□□□ -1.22
CASC3-202ENST00000394114 PRDM11Q9NQV5 511 aa7.43□□□□□ -1.22
CASC3-202ENST00000394114 MPRIPQ6WCQ1 1025 aa7.43□□□□□ -1.22
CASC3-202ENST00000394114 DZIP1LQ8IYY4 767 aaKnown RBP7.43□□□□□ -1.22
CASC3-202ENST00000394114 PRR7Q8TB68 274 aa7.43□□□□□ -1.22
CASC3-202ENST00000394114 TMEM121BQ9BXQ6 578 aaPredicted RBP7.43□□□□□ -1.22
CASC3-202ENST00000394114 LGR6Q9HBX8 967 aa7.43□□□□□ -1.22
CASC3-202ENST00000394114 CRYBG1Q9Y4K1 1723 aa7.43□□□□□ -1.22
CASC3-202ENST00000394114 NCLP19338 710 aaKnown RBP7.42□□□□□ -1.22
CASC3-202ENST00000394114 ATF7IPQ6VMQ6 1270 aa7.42□□□□□ -1.22
CASC3-202ENST00000394114 ITPRIPQ8IWB1 547 aa7.42□□□□□ -1.22
CASC3-202ENST00000394114 TRPC6Q9Y210 931 aa7.42□□□□□ -1.22
CASC3-202ENST00000394114 TMEM164Q5U3C3 297 aa7.42□□□□□ -1.22
CASC3-202ENST00000394114 ANKRD13AQ8IZ07 590 aa7.42□□□□□ -1.22
CASC3-202ENST00000394114 EPAS1Q99814 870 aa7.42□□□□□ -1.22
CASC3-202ENST00000394114 TRIM34Q9BYJ4 488 aa7.42□□□□□ -1.22
CASC3-202ENST00000394114 ZMIZ1Q9ULJ6 1067 aa7.42□□□□□ -1.22
CASC3-202ENST00000394114 KIF16BQ96L93 1317 aa7.42□□□□□ -1.22
CASC3-202ENST00000394114 COL18A1P39060 1754 aa7.42□□□□□ -1.22
CASC3-202ENST00000394114 PHF14O94880 888 aa7.42□□□□□ -1.22
CASC3-202ENST00000394114 BRD2P25440 801 aaKnown RBP7.42□□□□□ -1.22
CASC3-202ENST00000394114 ARID4AP29374 1257 aaPredicted RBP7.42□□□□□ -1.22
CASC3-202ENST00000394114 SOX11P35716 441 aa7.42□□□□□ -1.22
CASC3-202ENST00000394114 ALDH1L2Q3SY69 923 aa7.42□□□□□ -1.22
CASC3-202ENST00000394114 PLEKHO1Q53GL0 409 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 329 ms