RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 TNPO1Q92973 898 aaKnown RBP8.78□□□□□ -1
SMAD1-202ENST00000394092 RILPL2Q969X0 211 aa8.78□□□□□ -1
SMAD1-202ENST00000394092 GPATCH3Q96I76 525 aa8.78□□□□□ -1
SMAD1-202ENST00000394092 MAP3K2Q9Y2U5 619 aa8.78□□□□□ -1
SMAD1-202ENST00000394092 TTC41PQ6P2S7 1318 aa8.77□□□□□ -1
SMAD1-202ENST00000394092 TRAK2O60296 914 aa8.77□□□□□ -1.01
SMAD1-202ENST00000394092 PLEKHG5O94827 1062 aa8.77□□□□□ -1.01
SMAD1-202ENST00000394092 PHKG2P15735 406 aa8.77□□□□□ -1.01
SMAD1-202ENST00000394092 CHMLP26374 656 aa8.77□□□□□ -1.01
SMAD1-202ENST00000394092 NEXNQ0ZGT2 675 aa8.77□□□□□ -1.01
SMAD1-202ENST00000394092 OS9Q13438 667 aaPredicted RBP8.77□□□□□ -1.01
SMAD1-202ENST00000394092 LINS1Q8NG48 757 aa8.77□□□□□ -1.01
SMAD1-202ENST00000394092 SPATA31A3Q5VYP0 1347 aa8.77□□□□□ -1.01
SMAD1-202ENST00000394092 USP42Q9H9J4 1324 aaKnown RBP8.77□□□□□ -1.01
SMAD1-202ENST00000394092 ABCA3Q99758 1704 aa8.77□□□□□ -1.01
SMAD1-202ENST00000394092 ARFGEF2Q9Y6D5 1785 aa8.76□□□□□ -1.01
SMAD1-202ENST00000394092 NBPF7P0C2Y1 421 aaPredicted RBP8.76□□□□□ -1.01
SMAD1-202ENST00000394092 ZNF790Q6PG37 636 aa8.76□□□□□ -1.01
SMAD1-202ENST00000394092 CLEC17AQ6ZS10 378 aa8.76□□□□□ -1.01
SMAD1-202ENST00000394092 TTC5Q8N0Z6 440 aa8.76□□□□□ -1.01
SMAD1-202ENST00000394092 DCAF5Q96JK2 942 aa8.76□□□□□ -1.01
SMAD1-202ENST00000394092 UTYO14607 1347 aa8.76□□□□□ -1.01
SMAD1-202ENST00000394092 UBR2Q8IWV8 1755 aa8.75□□□□□ -1.01
SMAD1-202ENST00000394092 GRM8O00222 908 aa8.75□□□□□ -1.01
SMAD1-202ENST00000394092 GLRX3O76003 335 aaKnown RBP8.75□□□□□ -1.01
SMAD1-202ENST00000394092 ANXA1P04083 346 aa8.75□□□□□ -1.01
SMAD1-202ENST00000394092 LARP1Q6PKG0 1096 aaKnown RBP8.75□□□□□ -1.01
SMAD1-202ENST00000394092 CLASRPQ8N2M8 674 aaKnown RBP8.75□□□□□ -1.01
SMAD1-202ENST00000394092 IL17RAQ96F46 866 aa8.75□□□□□ -1.01
SMAD1-202ENST00000394092 IL1RAPL2Q9NP60 686 aa8.75□□□□□ -1.01
SMAD1-202ENST00000394092 ANO2Q9NQ90 1003 aa8.75□□□□□ -1.01
SMAD1-202ENST00000394092 GOLGA6L3A6NEY3 463 aa8.75□□□□□ -1.01
SMAD1-202ENST00000394092 TSHZ3Q63HK5 1081 aa8.75□□□□□ -1.01
SMAD1-202ENST00000394092 PAPPAQ13219 1627 aa8.74□□□□□ -1.01
SMAD1-202ENST00000394092 SNRPA1P09661 255 aaKnown RBP8.74□□□□□ -1.01
SMAD1-202ENST00000394092 RIC3Q7Z5B4 369 aa8.74□□□□□ -1.01
SMAD1-202ENST00000394092 NUTM1Q86Y26 1132 aa8.74□□□□□ -1.01
SMAD1-202ENST00000394092 PI4K2BQ8TCG2 481 aa8.74□□□□□ -1.01
SMAD1-202ENST00000394092 RUFY2Q8WXA3 655 aa8.74□□□□□ -1.01
SMAD1-202ENST00000394092 FMNL2Q96PY5 1086 aa8.74□□□□□ -1.01
SMAD1-202ENST00000394092 SSUH2Q9Y2M2 353 aa8.74□□□□□ -1.01
SMAD1-202ENST00000394092 ERBB4Q15303 1308 aa8.74□□□□□ -1.01
SMAD1-202ENST00000394092 RAD50Q92878 1312 aa8.73□□□□□ -1.01
SMAD1-202ENST00000394092 PCDH11XQ9BZA7 1347 aa8.73□□□□□ -1.01
SMAD1-202ENST00000394092 PCDH11YQ9BZA8 1340 aa8.73□□□□□ -1.01
SMAD1-202ENST00000394092 CD44P16070 742 aaKnown RBP8.73□□□□□ -1.01
SMAD1-202ENST00000394092 CLCN6P51797 869 aa8.73□□□□□ -1.01
SMAD1-202ENST00000394092 PROSER3Q2NL68 480 aa8.73□□□□□ -1.01
SMAD1-202ENST00000394092 ECHDC1Q9NTX5 307 aa8.73□□□□□ -1.01
SMAD1-202ENST00000394092 STRCQ7RTU9 1775 aa8.73□□□□□ -1.01
SMAD1-202ENST00000394092 GLI3P10071 1580 aa8.73□□□□□ -1.01
SMAD1-202ENST00000394092 COL15A1P39059 1388 aa8.72□□□□□ -1.01
SMAD1-202ENST00000394092 HIP1O00291 1037 aa8.72□□□□□ -1.01
SMAD1-202ENST00000394092 IFIT2P09913 472 aaKnown RBP8.72□□□□□ -1.01
SMAD1-202ENST00000394092 PRR29P0C7W0 189 aa8.72□□□□□ -1.01
SMAD1-202ENST00000394092 NEK4P51957 841 aa8.72□□□□□ -1.01
SMAD1-202ENST00000394092 G3BP1Q13283 466 aaKnown RBP eCLIP8.72□□□□□ -1.01
SMAD1-202ENST00000394092 PDIA6Q15084 440 aa8.72□□□□□ -1.01
SMAD1-202ENST00000394092 KIAA1211Q6ZU35 1233 aa8.72□□□□□ -1.01
SMAD1-202ENST00000394092 NUP188Q5SRE5 1749 aa8.72□□□□□ -1.01
SMAD1-202ENST00000394092 NHSL1Q5SYE7 1610 aa8.72□□□□□ -1.01
SMAD1-202ENST00000394092 WDR17Q8IZU2 1322 aa8.72□□□□□ -1.01
SMAD1-202ENST00000394092 FSD2A1L4K1 749 aa8.72□□□□□ -1.01
SMAD1-202ENST00000394092 SGSM2O43147 1006 aa8.72□□□□□ -1.01
SMAD1-202ENST00000394092 CYP2E1P05181 493 aaPredicted RBP8.72□□□□□ -1.01
SMAD1-202ENST00000394092 SSFA2P28290 1259 aa8.72□□□□□ -1.01
SMAD1-202ENST00000394092 HSPA4P34932 840 aa8.72□□□□□ -1.01
SMAD1-202ENST00000394092 CABP4P57796 275 aa8.72□□□□□ -1.01
SMAD1-202ENST00000394092 AIMP1Q12904 312 aaKnown RBP8.72□□□□□ -1.01
SMAD1-202ENST00000394092 CWF19L2Q2TBE0 894 aaKnown RBP8.72□□□□□ -1.01
SMAD1-202ENST00000394092 NFATC2IPQ8NCF5 419 aa8.72□□□□□ -1.01
SMAD1-202ENST00000394092 INTS4Q96HW7 963 aaKnown RBP8.72□□□□□ -1.01
SMAD1-202ENST00000394092 DCBLD2Q96PD2 775 aa8.72□□□□□ -1.01
SMAD1-202ENST00000394092 METTL22Q9BUU2 404 aaPredicted RBP8.72□□□□□ -1.01
SMAD1-202ENST00000394092 DIAPH3Q9NSV4 1193 aa8.72□□□□□ -1.01
SMAD1-202ENST00000394092 SHANK3Q9BYB0 1731 aa8.71□□□□□ -1.02
SMAD1-202ENST00000394092 PRAMEF22A3QJZ6 481 aa8.71□□□□□ -1.02
SMAD1-202ENST00000394092 NEURL1BA8MQ27 555 aa8.71□□□□□ -1.02
SMAD1-202ENST00000394092 BAG4O95429 457 aaKnown RBP8.71□□□□□ -1.02
SMAD1-202ENST00000394092 MRE11P49959 708 aa8.71□□□□□ -1.02
SMAD1-202ENST00000394092 SLC39A6Q13433 755 aa8.71□□□□□ -1.02
SMAD1-202ENST00000394092 CHRNA2Q15822 529 aa8.71□□□□□ -1.02
SMAD1-202ENST00000394092 BRINP3Q76B58 766 aa8.71□□□□□ -1.02
SMAD1-202ENST00000394092 UNC5CLQ8IV45 518 aa8.71□□□□□ -1.02
SMAD1-202ENST00000394092 DDX17Q92841 729 aaKnown RBP8.71□□□□□ -1.02
SMAD1-202ENST00000394092 EVI5LQ96CN4 794 aa8.71□□□□□ -1.02
SMAD1-202ENST00000394092 SUCLG2Q96I99 432 aa8.71□□□□□ -1.02
SMAD1-202ENST00000394092 ZNF496Q96IT1 587 aaPredicted RBP8.71□□□□□ -1.02
SMAD1-202ENST00000394092 BICC1Q9H694 974 aaKnown RBP8.71□□□□□ -1.02
SMAD1-202ENST00000394092 COL5A2P05997 1499 aaPredicted RBP8.71□□□□□ -1.02
SMAD1-202ENST00000394092 CYP27B1O15528 508 aa8.7□□□□□ -1.02
SMAD1-202ENST00000394092 MYL6BP14649 208 aa8.7□□□□□ -1.02
SMAD1-202ENST00000394092 CUL4AQ13619 759 aa8.7□□□□□ -1.02
SMAD1-202ENST00000394092 GCKRQ14397 625 aa8.7□□□□□ -1.02
SMAD1-202ENST00000394092 KLHL40Q2TBA0 621 aa8.7□□□□□ -1.02
SMAD1-202ENST00000394092 ANKRD13DQ6ZTN6 518 aa8.7□□□□□ -1.02
SMAD1-202ENST00000394092 AACSQ86V21 672 aa8.7□□□□□ -1.02
SMAD1-202ENST00000394092 CABLES1Q8TDN4 633 aa8.7□□□□□ -1.02
SMAD1-202ENST00000394092 XAGE3Q8WTP9 111 aa8.7□□□□□ -1.02
SMAD1-202ENST00000394092 TMX3Q96JJ7 454 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms