RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 NBPF10Q6P3W6 841 aaKnown RBP28.55■■■□□ 2.16
RARA-204ENST00000394089 NBPF15Q8N660 670 aa28.55■■■□□ 2.16
RARA-204ENST00000394089 NEXNQ0ZGT2 675 aa28.54■■■□□ 2.16
RARA-204ENST00000394089 CWF19L2Q2TBE0 894 aaKnown RBP28.54■■■□□ 2.16
RARA-204ENST00000394089 TEX13AQ9BXU3 409 aaPredicted RBP28.54■■■□□ 2.16
RARA-204ENST00000394089 C9orf78Q9NZ63 289 aaPredicted RBP28.54■■■□□ 2.16
RARA-204ENST00000394089 ASAP1Q9ULH1 1129 aa28.54■■■□□ 2.16
RARA-204ENST00000394089 XRCC6P12956 609 aaKnown RBP eCLIP28.53■■■□□ 2.16
RARA-204ENST00000394089 PIP4K2AP48426 406 aaPredicted RBP28.53■■■□□ 2.16
RARA-204ENST00000394089 POLA2Q14181 598 aa28.53■■■□□ 2.16
RARA-204ENST00000394089 BMP2KLQ5H9B9 411 aa28.53■■■□□ 2.16
RARA-204ENST00000394089 IGKV5-2P06315 115 aa28.52■■■□□ 2.16
RARA-204ENST00000394089 CCDC9Q9Y3X0 531 aaKnown RBP28.52■■■□□ 2.16
RARA-204ENST00000394089 BCL9LQ86UU0 1499 aa28.52■■■□□ 2.16
RARA-204ENST00000394089 GOLGA6L3A6NEY3 463 aa28.52■■■□□ 2.16
RARA-204ENST00000394089 PLBD2Q8NHP8 589 aa28.52■■■□□ 2.16
RARA-204ENST00000394089 NGLY1Q96IV0 654 aa28.52■■■□□ 2.16
RARA-204ENST00000394089 GRM8O00222 908 aa28.51■■■□□ 2.15
RARA-204ENST00000394089 VPS72Q15906 364 aa28.51■■■□□ 2.15
RARA-204ENST00000394089 PPP1R42Q7Z4L9 355 aa28.51■■■□□ 2.15
RARA-204ENST00000394089 MTX1Q13505 466 aa28.5■■■□□ 2.15
RARA-204ENST00000394089 PLEKHM2Q8IWE5 1019 aa28.5■■■□□ 2.15
RARA-204ENST00000394089 FNBP4Q8N3X1 1017 aaPredicted RBP28.5■■■□□ 2.15
RARA-204ENST00000394089 C8orf37Q96NL8 207 aa28.5■■■□□ 2.15
RARA-204ENST00000394089 NEURL1BA8MQ27 555 aa28.5■■■□□ 2.15
RARA-204ENST00000394089 A1BGP04217 495 aa28.5■■■□□ 2.15
RARA-204ENST00000394089 MYD88Q99836 296 aa28.49■■■□□ 2.15
RARA-204ENST00000394089 DOT1LQ8TEK3 1739 aa28.49■■■□□ 2.15
RARA-204ENST00000394089 ISY1Q9ULR0 285 aaKnown RBP28.48■■■□□ 2.15
RARA-204ENST00000394089 EXOC6BQ9Y2D4 811 aa28.48■■■□□ 2.15
RARA-204ENST00000394089 ARFGEF2Q9Y6D5 1785 aa28.48■■■□□ 2.15
RARA-204ENST00000394089 SMARCA5O60264 1052 aaPredicted RBP28.47■■■□□ 2.15
RARA-204ENST00000394089 MARCH10Q8NA82 808 aaPredicted RBP28.47■■■□□ 2.15
RARA-204ENST00000394089 TBC1D32Q96NH3 1257 aa28.47■■■□□ 2.15
RARA-204ENST00000394089 PRIM1P49642 420 aaKnown RBP28.47■■■□□ 2.15
RARA-204ENST00000394089 GCKRQ14397 625 aa28.47■■■□□ 2.15
RARA-204ENST00000394089 APBB1O00213 710 aa28.46■■■□□ 2.15
RARA-204ENST00000394089 SRGAP3O43295 1099 aa28.46■■■□□ 2.15
RARA-204ENST00000394089 SEC24BO95487 1268 aa28.46■■■□□ 2.15
RARA-204ENST00000394089 C16orf71Q8IYS4 520 aaPredicted RBP28.46■■■□□ 2.15
RARA-204ENST00000394089 LRRCC1Q9C099 1032 aa28.46■■■□□ 2.15
RARA-204ENST00000394089 HSP90AA1P07900 732 aaKnown RBP28.45■■■□□ 2.15
RARA-204ENST00000394089 HSP90AA2PQ14568 343 aaPredicted RBP28.45■■■□□ 2.15
RARA-204ENST00000394089 DNAJC10Q8IXB1 793 aa28.45■■■□□ 2.15
RARA-204ENST00000394089 RAB11FIP3O75154 756 aa28.45■■■□□ 2.14
RARA-204ENST00000394089 RBM42Q9BTD8 480 aaKnown RBP28.45■■■□□ 2.14
RARA-204ENST00000394089 STARD3NLO95772 234 aa28.44■■■□□ 2.14
RARA-204ENST00000394089 SYTL4Q96C24 671 aaPredicted RBP28.43■■■□□ 2.14
RARA-204ENST00000394089 MCM4P33991 863 aa28.43■■■□□ 2.14
RARA-204ENST00000394089 NUP188Q5SRE5 1749 aa28.43■■■□□ 2.14
RARA-204ENST00000394089 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.43■■■□□ 2.14
RARA-204ENST00000394089 TTLL7Q6ZT98 887 aa28.42■■■□□ 2.14
RARA-204ENST00000394089 SUCLG2Q96I99 432 aa28.42■■■□□ 2.14
RARA-204ENST00000394089 NAP1L5Q96NT1 182 aaPredicted RBP28.42■■■□□ 2.14
RARA-204ENST00000394089 ZMYND15Q9H091 742 aa28.42■■■□□ 2.14
RARA-204ENST00000394089 SLKQ9H2G2 1235 aaPredicted RBP28.42■■■□□ 2.14
RARA-204ENST00000394089 MRE11P49959 708 aa28.41■■■□□ 2.14
RARA-204ENST00000394089 TTC22Q5TAA0 569 aa28.41■■■□□ 2.14
RARA-204ENST00000394089 OTUD7AQ8TE49 926 aaPredicted RBP28.41■■■□□ 2.14
RARA-204ENST00000394089 KAZALD1Q96I82 304 aa28.41■■■□□ 2.14
RARA-204ENST00000394089 TBC1D2Q9BYX2 928 aa28.4■■■□□ 2.14
RARA-204ENST00000394089 OSBPL3Q9H4L5 887 aa28.4■■■□□ 2.14
RARA-204ENST00000394089 COL15A1P39059 1388 aa28.4■■■□□ 2.14
RARA-204ENST00000394089 SURF6O75683 361 aaKnown RBP28.4■■■□□ 2.14
RARA-204ENST00000394089 FAM98CQ17RN3 349 aaKnown RBP28.4■■■□□ 2.14
RARA-204ENST00000394089 HSP90AB4PQ58FF6 505 aa28.4■■■□□ 2.14
RARA-204ENST00000394089 SLC4A9Q96Q91 983 aa28.4■■■□□ 2.14
RARA-204ENST00000394089 UPF2Q9HAU5 1272 aaKnown RBP28.39■■■□□ 2.14
RARA-204ENST00000394089 AFDNP55196 1824 aaKnown RBP28.39■■■□□ 2.13
RARA-204ENST00000394089 GSPT1P15170 499 aaKnown RBP28.38■■■□□ 2.13
RARA-204ENST00000394089 HSPA1LP34931 641 aa28.38■■■□□ 2.13
RARA-204ENST00000394089 USP21Q9UK80 565 aa28.38■■■□□ 2.13
RARA-204ENST00000394089 SALL3Q9BXA9 1300 aa28.38■■■□□ 2.13
RARA-204ENST00000394089 CYP19A1P11511 503 aaPredicted RBP28.37■■■□□ 2.13
RARA-204ENST00000394089 BICC1Q9H694 974 aaKnown RBP28.37■■■□□ 2.13
RARA-204ENST00000394089 ATP5J2-PTCD1G3V325 749 aa28.36■■■□□ 2.13
RARA-204ENST00000394089 TJP1Q07157 1748 aa28.36■■■□□ 2.13
RARA-204ENST00000394089 KIF1BPQ96EK5 621 aa28.35■■■□□ 2.13
RARA-204ENST00000394089 PDE1AP54750 535 aa28.35■■■□□ 2.13
RARA-204ENST00000394089 ACSBG1Q96GR2 724 aa28.35■■■□□ 2.13
RARA-204ENST00000394089 RHPN1Q8TCX5 695 aa28.34■■■□□ 2.13
RARA-204ENST00000394089 ZBTB3Q9H5J0 574 aa28.33■■■□□ 2.13
RARA-204ENST00000394089 A0A087WZG4 1122 aa28.33■■■□□ 2.13
RARA-204ENST00000394089 CASP7P55210 303 aa28.33■■■□□ 2.13
RARA-204ENST00000394089 CWC25Q9NXE8 425 aaPredicted RBP28.33■■■□□ 2.13
RARA-204ENST00000394089 CCDC191Q8NCU4 936 aa28.32■■■□□ 2.12
RARA-204ENST00000394089 STAP2Q9UGK3 403 aa28.32■■■□□ 2.12
RARA-204ENST00000394089 H7C1W4 665 aa28.31■■■□□ 2.12
RARA-204ENST00000394089 CDC45O75419 566 aa28.31■■■□□ 2.12
RARA-204ENST00000394089 KIF6Q6ZMV9 814 aa28.31■■■□□ 2.12
RARA-204ENST00000394089 PANK2Q9BZ23 570 aa28.31■■■□□ 2.12
RARA-204ENST00000394089 CHMP5Q9NZZ3 219 aa28.31■■■□□ 2.12
RARA-204ENST00000394089 KAT6BQ8WYB5 2073 aa28.31■■■□□ 2.12
RARA-204ENST00000394089 MEX3CQ5U5Q3 659 aaKnown RBP28.31■■■□□ 2.12
RARA-204ENST00000394089 CICQ96RK0 1608 aaPredicted RBP28.3■■■□□ 2.12
RARA-204ENST00000394089 MX1P20591 662 aa28.3■■■□□ 2.12
RARA-204ENST00000394089 UBE3BQ7Z3V4 1068 aa28.3■■■□□ 2.12
RARA-204ENST00000394089 ERC1Q8IUD2 1116 aa28.3■■■□□ 2.12
RARA-204ENST00000394089 ISCA1Q9BUE6 129 aa28.3■■■□□ 2.12
RARA-204ENST00000394089 THSD7AQ9UPZ6 1657 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms