RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 CYP27B1O15528 508 aa16.68■□□□□ 0.26
CCDC142-202ENST00000393965 IGKV5-2P06315 115 aa16.68■□□□□ 0.26
CCDC142-202ENST00000393965 HOXB7P09629 217 aa16.68■□□□□ 0.26
CCDC142-202ENST00000393965 ZNF790Q6PG37 636 aa16.68■□□□□ 0.26
CCDC142-202ENST00000393965 KSR2Q6VAB6 950 aa16.68■□□□□ 0.26
CCDC142-202ENST00000393965 UBE2Q2Q8WVN8 375 aa16.68■□□□□ 0.26
CCDC142-202ENST00000393965 SIL1Q9H173 461 aa16.68■□□□□ 0.26
CCDC142-202ENST00000393965 CIZ1Q9ULV3 898 aaPredicted RBP16.68■□□□□ 0.26
CCDC142-202ENST00000393965 COL18A1P39060 1754 aa16.68■□□□□ 0.26
CCDC142-202ENST00000393965 BAG4O95429 457 aaKnown RBP16.68■□□□□ 0.26
CCDC142-202ENST00000393965 RAPGEF4Q8WZA2 1011 aa16.68■□□□□ 0.26
CCDC142-202ENST00000393965 CHMP3Q9Y3E7 222 aa16.68■□□□□ 0.26
CCDC142-202ENST00000393965 SCN11AQ9UI33 1791 aa16.68■□□□□ 0.26
CCDC142-202ENST00000393965 NPHP3Q7Z494 1330 aa16.67■□□□□ 0.26
CCDC142-202ENST00000393965 PHKG2P15735 406 aa16.67■□□□□ 0.26
CCDC142-202ENST00000393965 OS9Q13438 667 aaPredicted RBP16.67■□□□□ 0.26
CCDC142-202ENST00000393965 BICC1Q9H694 974 aaKnown RBP16.67■□□□□ 0.26
CCDC142-202ENST00000393965 CPA1P15085 419 aa16.67■□□□□ 0.26
CCDC142-202ENST00000393965 DNTTIP2Q5QJE6 756 aaKnown RBP16.67■□□□□ 0.26
CCDC142-202ENST00000393965 TLR7Q9NYK1 1049 aaKnown RBP16.67■□□□□ 0.26
CCDC142-202ENST00000393965 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
CCDC142-202ENST00000393965 EPHA10Q5JZY3 1008 aa16.67■□□□□ 0.26
CCDC142-202ENST00000393965 COL9A3Q14050 684 aaPredicted RBP16.66■□□□□ 0.26
CCDC142-202ENST00000393965 CWC27Q6UX04 472 aaKnown RBP16.66■□□□□ 0.26
CCDC142-202ENST00000393965 SLC52A2Q9HAB3 445 aa16.66■□□□□ 0.26
CCDC142-202ENST00000393965 KIF1AQ12756 1690 aa16.66■□□□□ 0.26
CCDC142-202ENST00000393965 SYCE3A1L190 88 aa16.66■□□□□ 0.26
CCDC142-202ENST00000393965 TMX3Q96JJ7 454 aa16.66■□□□□ 0.26
CCDC142-202ENST00000393965 KIAA1211Q6ZU35 1233 aa16.66■□□□□ 0.26
CCDC142-202ENST00000393965 KIF1BPQ96EK5 621 aa16.66■□□□□ 0.26
CCDC142-202ENST00000393965 XAGE3Q8WTP9 111 aa16.65■□□□□ 0.26
CCDC142-202ENST00000393965 ADAMTS7Q9UKP4 1686 aa16.65■□□□□ 0.26
CCDC142-202ENST00000393965 ST18O60284 1047 aa16.65■□□□□ 0.26
CCDC142-202ENST00000393965 CYP2E1P05181 493 aaPredicted RBP16.65■□□□□ 0.26
CCDC142-202ENST00000393965 COPS6Q7L5N1 327 aa16.65■□□□□ 0.26
CCDC142-202ENST00000393965 RASEFQ8IZ41 740 aa16.64■□□□□ 0.25
CCDC142-202ENST00000393965 CCDC8Q9H0W5 538 aaPredicted RBP16.64■□□□□ 0.25
CCDC142-202ENST00000393965 SASH1O94885 1247 aa16.64■□□□□ 0.25
CCDC142-202ENST00000393965 TATP17735 454 aaPredicted RBP16.63■□□□□ 0.25
CCDC142-202ENST00000393965 MYD88Q99836 296 aa16.63■□□□□ 0.25
CCDC142-202ENST00000393965 DDX21Q9NR30 783 aaKnown RBP eCLIP16.63■□□□□ 0.25
CCDC142-202ENST00000393965 KDM4FA0A1W2PPD8 638 aa16.63■□□□□ 0.25
CCDC142-202ENST00000393965 RAB11FIP3O75154 756 aa16.63■□□□□ 0.25
CCDC142-202ENST00000393965 RIC3Q7Z5B4 369 aa16.63■□□□□ 0.25
CCDC142-202ENST00000393965 NDUFB9Q9Y6M9 179 aa16.63■□□□□ 0.25
CCDC142-202ENST00000393965 ZNF335Q9H4Z2 1342 aaPredicted RBP16.63■□□□□ 0.25
CCDC142-202ENST00000393965 GRM8O00222 908 aa16.63■□□□□ 0.25
CCDC142-202ENST00000393965 CHGBP05060 677 aa16.63■□□□□ 0.25
CCDC142-202ENST00000393965 XIRP1Q702N8 1843 aaKnown RBP16.62■□□□□ 0.25
CCDC142-202ENST00000393965 ATP5J2-PTCD1G3V325 749 aa16.62■□□□□ 0.25
CCDC142-202ENST00000393965 PTCD1O75127 700 aaKnown RBP16.62■□□□□ 0.25
CCDC142-202ENST00000393965 CLCN1P35523 988 aa16.62■□□□□ 0.25
CCDC142-202ENST00000393965 PRIM1P49642 420 aaKnown RBP16.62■□□□□ 0.25
CCDC142-202ENST00000393965 NSFL1CQ9UNZ2 370 aaKnown RBP16.62■□□□□ 0.25
CCDC142-202ENST00000393965 PTH1RQ03431 593 aa16.61■□□□□ 0.25
CCDC142-202ENST00000393965 EAF2Q96CJ1 260 aaPredicted RBP16.61■□□□□ 0.25
CCDC142-202ENST00000393965 LRP10Q7Z4F1 713 aa16.61■□□□□ 0.25
CCDC142-202ENST00000393965 AACSQ86V21 672 aa16.61■□□□□ 0.25
CCDC142-202ENST00000393965 EDC3Q96F86 508 aaKnown RBP16.61■□□□□ 0.25
CCDC142-202ENST00000393965 HYPKQ9NX55 129 aa16.61■□□□□ 0.25
CCDC142-202ENST00000393965 ZNF830Q96NB3 372 aaPredicted RBP16.61■□□□□ 0.25
CCDC142-202ENST00000393965 SGSM2O43147 1006 aa16.6■□□□□ 0.25
CCDC142-202ENST00000393965 LSG1Q9H089 658 aaKnown RBP16.6■□□□□ 0.25
CCDC142-202ENST00000393965 FAM177BA6PVY3 158 aa16.6■□□□□ 0.25
CCDC142-202ENST00000393965 GLIPR1L2Q4G1C9 344 aa16.6■□□□□ 0.25
CCDC142-202ENST00000393965 LINS1Q8NG48 757 aa16.6■□□□□ 0.25
CCDC142-202ENST00000393965 NEURL1BA8MQ27 555 aa16.6■□□□□ 0.25
CCDC142-202ENST00000393965 MTX1Q13505 466 aa16.6■□□□□ 0.25
CCDC142-202ENST00000393965 CADPS2Q86UW7 1296 aa16.6■□□□□ 0.25
CCDC142-202ENST00000393965 ALDH1L1O75891 902 aa16.59■□□□□ 0.25
CCDC142-202ENST00000393965 IFNL2Q8IZJ0 200 aa16.59■□□□□ 0.25
CCDC142-202ENST00000393965 RBSNQ9H1K0 784 aa16.59■□□□□ 0.25
CCDC142-202ENST00000393965 LMBRD1Q9NUN5 540 aa16.59■□□□□ 0.25
CCDC142-202ENST00000393965 CCDC9Q9Y3X0 531 aaKnown RBP16.59■□□□□ 0.25
CCDC142-202ENST00000393965 SNX14Q9Y5W7 946 aa16.59■□□□□ 0.25
CCDC142-202ENST00000393965 OVOS2A0A0G2JMS6 1433 aa16.59■□□□□ 0.25
CCDC142-202ENST00000393965 TNS3Q68CZ2 1445 aa16.59■□□□□ 0.25
CCDC142-202ENST00000393965 HSPA4P34932 840 aa16.58■□□□□ 0.25
CCDC142-202ENST00000393965 SPATA31A3Q5VYP0 1347 aa16.58■□□□□ 0.25
CCDC142-202ENST00000393965 BRINP3Q76B58 766 aa16.58■□□□□ 0.24
CCDC142-202ENST00000393965 FAM227BQ96M60 508 aa16.58■□□□□ 0.24
CCDC142-202ENST00000393965 TCHHQ07283 1943 aa16.58■□□□□ 0.24
CCDC142-202ENST00000393965 AOX1Q06278 1338 aa16.58■□□□□ 0.24
CCDC142-202ENST00000393965 ADCK5Q3MIX3 580 aa16.58■□□□□ 0.24
CCDC142-202ENST00000393965 ZSCAN23Q3MJ62 389 aa16.57■□□□□ 0.24
CCDC142-202ENST00000393965 CLASRPQ8N2M8 674 aaKnown RBP16.57■□□□□ 0.24
CCDC142-202ENST00000393965 AFDNP55196 1824 aaKnown RBP16.57■□□□□ 0.24
CCDC142-202ENST00000393965 LARGE1O95461 756 aa16.57■□□□□ 0.24
CCDC142-202ENST00000393965 GCKRQ14397 625 aa16.57■□□□□ 0.24
CCDC142-202ENST00000393965 CNTROBQ8N137 903 aa16.57■□□□□ 0.24
CCDC142-202ENST00000393965 GPT2Q8TD30 523 aa16.57■□□□□ 0.24
CCDC142-202ENST00000393965 BOLA2Q9H3K6 86 aa16.57■□□□□ 0.24
CCDC142-202ENST00000393965 TAF6LQ9Y6J9 622 aa16.57■□□□□ 0.24
CCDC142-202ENST00000393965 TSC1Q92574 1164 aa16.57■□□□□ 0.24
CCDC142-202ENST00000393965 IFIT2P09913 472 aaKnown RBP16.56■□□□□ 0.24
CCDC142-202ENST00000393965 SKOR2Q2VWA4 1001 aaPredicted RBP16.56■□□□□ 0.24
CCDC142-202ENST00000393965 RAD50Q92878 1312 aa16.56■□□□□ 0.24
CCDC142-202ENST00000393965 GLI3P10071 1580 aa16.56■□□□□ 0.24
CCDC142-202ENST00000393965 CLEC17AQ6ZS10 378 aa16.56■□□□□ 0.24
CCDC142-202ENST00000393965 UBE3BQ7Z3V4 1068 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms