RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 SNRKQ9NRH2 765 aa15.41■□□□□ 0.06
ERCC2-204ENST00000391945 OVOS2A0A0J9YW53 1432 aa15.41■□□□□ 0.06
ERCC2-204ENST00000391945 OVOS2Q6IE36 1432 aa15.41■□□□□ 0.06
ERCC2-204ENST00000391945 SPATA31A3Q5VYP0 1347 aa15.4■□□□□ 0.06
ERCC2-204ENST00000391945 NUCB2P80303 420 aa15.4■□□□□ 0.06
ERCC2-204ENST00000391945 PRIM1P49642 420 aaKnown RBP15.4■□□□□ 0.06
ERCC2-204ENST00000391945 KIF24Q5T7B8 1368 aa15.4■□□□□ 0.06
ERCC2-204ENST00000391945 DNAJC10Q8IXB1 793 aa15.4■□□□□ 0.06
ERCC2-204ENST00000391945 JAKMIP1Q96N16 626 aaKnown RBP15.4■□□□□ 0.06
ERCC2-204ENST00000391945 TRDNQ13061 729 aa15.39■□□□□ 0.05
ERCC2-204ENST00000391945 CEP170BQ9Y4F5 1589 aaPredicted RBP15.39■□□□□ 0.05
ERCC2-204ENST00000391945 PRPF40BQ6NWY9 871 aaKnown RBP15.39■□□□□ 0.05
ERCC2-204ENST00000391945 LDHAL6AQ6ZMR3 332 aa15.39■□□□□ 0.05
ERCC2-204ENST00000391945 MCM4P33991 863 aa15.39■□□□□ 0.05
ERCC2-204ENST00000391945 STK11IPQ8N1F8 1099 aa15.39■□□□□ 0.05
ERCC2-204ENST00000391945 STK3Q13188 491 aa15.38■□□□□ 0.05
ERCC2-204ENST00000391945 IDH1O75874 414 aaKnown RBP15.38■□□□□ 0.05
ERCC2-204ENST00000391945 IFIT1P09914 478 aaKnown RBP15.38■□□□□ 0.05
ERCC2-204ENST00000391945 RALYLQ86SE5 291 aaKnown RBP15.38■□□□□ 0.05
ERCC2-204ENST00000391945 DIP2AQ14689 1571 aa15.38■□□□□ 0.05
ERCC2-204ENST00000391945 PTMSP20962 102 aa15.38■□□□□ 0.05
ERCC2-204ENST00000391945 SIRT2Q8IXJ6 389 aa15.38■□□□□ 0.05
ERCC2-204ENST00000391945 PSMA5P28066 241 aa15.37■□□□□ 0.05
ERCC2-204ENST00000391945 BRPF1P55201 1214 aaPredicted RBP15.37■□□□□ 0.05
ERCC2-204ENST00000391945 CYP46A1Q9Y6A2 500 aa15.37■□□□□ 0.05
ERCC2-204ENST00000391945 DNTTIP2Q5QJE6 756 aaKnown RBP15.37■□□□□ 0.05
ERCC2-204ENST00000391945 FBXW7Q969H0 707 aa15.37■□□□□ 0.05
ERCC2-204ENST00000391945 SUCLG2Q96I99 432 aa15.37■□□□□ 0.05
ERCC2-204ENST00000391945 C1orf167Q5SNV9 1468 aa15.37■□□□□ 0.05
ERCC2-204ENST00000391945 HSP90AB3PQ58FF7 597 aa15.37■□□□□ 0.05
ERCC2-204ENST00000391945 FAM89AQ96GI7 184 aa15.37■□□□□ 0.05
ERCC2-204ENST00000391945 METTL22Q9BUU2 404 aaPredicted RBP15.37■□□□□ 0.05
ERCC2-204ENST00000391945 REREQ9P2R6 1566 aa15.36■□□□□ 0.05
ERCC2-204ENST00000391945 CYP27B1O15528 508 aa15.36■□□□□ 0.05
ERCC2-204ENST00000391945 KDM4AO75164 1064 aa15.36■□□□□ 0.05
ERCC2-204ENST00000391945 CASTP20810 708 aaKnown RBP15.36■□□□□ 0.05
ERCC2-204ENST00000391945 DDX46Q7L014 1031 aaKnown RBP15.36■□□□□ 0.05
ERCC2-204ENST00000391945 GOLIM4O00461 696 aa15.36■□□□□ 0.05
ERCC2-204ENST00000391945 CPLX1O14810 134 aa15.36■□□□□ 0.05
ERCC2-204ENST00000391945 FAM98CQ17RN3 349 aaKnown RBP15.36■□□□□ 0.05
ERCC2-204ENST00000391945 WDR17Q8IZU2 1322 aa15.35■□□□□ 0.05
ERCC2-204ENST00000391945 MCM2P49736 904 aa15.35■□□□□ 0.05
ERCC2-204ENST00000391945 BEND3Q5T5X7 828 aa15.35■□□□□ 0.05
ERCC2-204ENST00000391945 ANKRD18BA2A2Z9 1011 aa15.35■□□□□ 0.05
ERCC2-204ENST00000391945 IGHMBP2P38935 993 aaKnown RBP15.35■□□□□ 0.05
ERCC2-204ENST00000391945 TTLL7Q6ZT98 887 aa15.35■□□□□ 0.05
ERCC2-204ENST00000391945 DZIP3Q86Y13 1208 aaKnown RBP15.35■□□□□ 0.05
ERCC2-204ENST00000391945 ZPR1O75312 459 aa15.34■□□□□ 0.05
ERCC2-204ENST00000391945 GLIPR1L2Q4G1C9 344 aa15.34■□□□□ 0.05
ERCC2-204ENST00000391945 BLOC1S2Q6QNY1 142 aa15.34■□□□□ 0.05
ERCC2-204ENST00000391945 ZNF652Q9Y2D9 606 aa15.34■□□□□ 0.05
ERCC2-204ENST00000391945 KIF3AQ9Y496 699 aa15.34■□□□□ 0.05
ERCC2-204ENST00000391945 FER1L4A9Z1Z3 1794 aa15.34■□□□□ 0.05
ERCC2-204ENST00000391945 PHF14O94880 888 aa15.34■□□□□ 0.05
ERCC2-204ENST00000391945 GCKRQ14397 625 aa15.34■□□□□ 0.05
ERCC2-204ENST00000391945 MSNP26038 577 aaKnown RBP15.34■□□□□ 0.05
ERCC2-204ENST00000391945 NFXL1Q6ZNB6 911 aa15.34■□□□□ 0.05
ERCC2-204ENST00000391945 PLBD2Q8NHP8 589 aa15.34■□□□□ 0.05
ERCC2-204ENST00000391945 EVI5LQ96CN4 794 aa15.34■□□□□ 0.05
ERCC2-204ENST00000391945 ABCF2Q9UG63 623 aa15.34■□□□□ 0.05
ERCC2-204ENST00000391945 ASAP1Q9ULH1 1129 aa15.34■□□□□ 0.05
ERCC2-204ENST00000391945 RRP12Q5JTH9 1297 aaKnown RBP15.33■□□□□ 0.05
ERCC2-204ENST00000391945 ESYT1Q9BSJ8 1104 aa15.33■□□□□ 0.05
ERCC2-204ENST00000391945 CARD10Q9BWT7 1032 aa15.33■□□□□ 0.05
ERCC2-204ENST00000391945 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.33■□□□□ 0.05
ERCC2-204ENST00000391945 ATP6V1DQ9Y5K8 247 aa15.33■□□□□ 0.05
ERCC2-204ENST00000391945 SKOR2Q2VWA4 1001 aaPredicted RBP15.33■□□□□ 0.04
ERCC2-204ENST00000391945 SYAP1Q96A49 352 aaPredicted RBP15.33■□□□□ 0.04
ERCC2-204ENST00000391945 AKAP2Q9Y2D5 859 aa15.33■□□□□ 0.04
ERCC2-204ENST00000391945 TFCP2Q12800 502 aa15.32■□□□□ 0.04
ERCC2-204ENST00000391945 PDRG1Q9NUG6 133 aa15.32■□□□□ 0.04
ERCC2-204ENST00000391945 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.32■□□□□ 0.04
ERCC2-204ENST00000391945 MYOM1P52179 1685 aa15.32■□□□□ 0.04
ERCC2-204ENST00000391945 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.32■□□□□ 0.04
ERCC2-204ENST00000391945 PRPF40AO75400 957 aaKnown RBP15.32■□□□□ 0.04
ERCC2-204ENST00000391945 SF3A1Q15459 793 aaKnown RBP15.32■□□□□ 0.04
ERCC2-204ENST00000391945 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.32■□□□□ 0.042e-6■■■■□ 20.6
ERCC2-204ENST00000391945 ERVV-2B6SEH9 535 aa15.32■□□□□ 0.04
ERCC2-204ENST00000391945 ZNF594Q96JF6 807 aaPredicted RBP15.32■□□□□ 0.04
ERCC2-204ENST00000391945 NEURL1BA8MQ27 555 aa15.31■□□□□ 0.04
ERCC2-204ENST00000391945 GSPT1P15170 499 aaKnown RBP15.31■□□□□ 0.04
ERCC2-204ENST00000391945 TIMM10P62072 90 aa15.31■□□□□ 0.04
ERCC2-204ENST00000391945 SYNE3Q6ZMZ3 975 aa15.31■□□□□ 0.04
ERCC2-204ENST00000391945 HELBQ8NG08 1087 aaPredicted RBP15.31■□□□□ 0.04
ERCC2-204ENST00000391945 NIP7Q9Y221 180 aaKnown RBP eCLIP15.31■□□□□ 0.04
ERCC2-204ENST00000391945 IQSEC2Q5JU85 1478 aa15.31■□□□□ 0.04
ERCC2-204ENST00000391945 CPLX2Q6PUV4 134 aaKnown RBP15.3■□□□□ 0.04
ERCC2-204ENST00000391945 TCEANC2Q96MN5 208 aa15.3■□□□□ 0.04
ERCC2-204ENST00000391945 NDUFB9Q9Y6M9 179 aa15.3■□□□□ 0.04
ERCC2-204ENST00000391945 CAVIN1Q6NZI2 390 aaKnown RBP15.3■□□□□ 0.04
ERCC2-204ENST00000391945 LRP2BPQ9P2M1 347 aa15.3■□□□□ 0.04
ERCC2-204ENST00000391945 CHMLP26374 656 aa15.29■□□□□ 0.04
ERCC2-204ENST00000391945 SSH3Q8TE77 659 aa15.29■□□□□ 0.04
ERCC2-204ENST00000391945 MAP2P11137 1827 aaKnown RBP15.29■□□□□ 0.04
ERCC2-204ENST00000391945 CSPP1Q1MSJ5 1256 aa15.29■□□□□ 0.04
ERCC2-204ENST00000391945 NOL10Q9BSC4 688 aaKnown RBP15.29■□□□□ 0.04
ERCC2-204ENST00000391945 IRS4O14654 1257 aaPredicted RBP15.28■□□□□ 0.04
ERCC2-204ENST00000391945 ARHGAP23Q9P227 1491 aa15.28■□□□□ 0.04
ERCC2-204ENST00000391945 FIBPO43427 364 aa15.28■□□□□ 0.04
ERCC2-204ENST00000391945 CCDC83Q8IWF9 413 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms