RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 ERBB4Q15303 1308 aa23.39■■□□□ 1.34
ERCC2-203ENST00000391944 UBR2Q8IWV8 1755 aa23.39■■□□□ 1.33
ERCC2-203ENST00000391944 OS9Q13438 667 aaPredicted RBP23.39■■□□□ 1.33
ERCC2-203ENST00000391944 PI4K2BQ8TCG2 481 aa23.39■■□□□ 1.33
ERCC2-203ENST00000391944 DDX54Q8TDD1 881 aaKnown RBP23.39■■□□□ 1.33
ERCC2-203ENST00000391944 K7ELQ4 463 aaPredicted RBP23.38■■□□□ 1.33
ERCC2-203ENST00000391944 DDIT3P35638 169 aa23.38■■□□□ 1.33
ERCC2-203ENST00000391944 ERC1Q8IUD2 1116 aa23.38■■□□□ 1.33
ERCC2-203ENST00000391944 PIP4K2AP48426 406 aaPredicted RBP23.38■■□□□ 1.33
ERCC2-203ENST00000391944 UNC5CLQ8IV45 518 aa23.38■■□□□ 1.33
ERCC2-203ENST00000391944 USP42Q9H9J4 1324 aaKnown RBP23.38■■□□□ 1.33
ERCC2-203ENST00000391944 CLASRPQ8N2M8 674 aaKnown RBP23.36■■□□□ 1.33
ERCC2-203ENST00000391944 PA2G4Q9UQ80 394 aaKnown RBP23.36■■□□□ 1.33
ERCC2-203ENST00000391944 PAPPAQ13219 1627 aa23.36■■□□□ 1.33
ERCC2-203ENST00000391944 TTC41PQ6P2S7 1318 aa23.35■■□□□ 1.33
ERCC2-203ENST00000391944 PLBD2Q8NHP8 589 aa23.35■■□□□ 1.33
ERCC2-203ENST00000391944 KCPQ6ZWJ8 1503 aa23.35■■□□□ 1.33
ERCC2-203ENST00000391944 NBPF26B4DH59 902 aa23.34■■□□□ 1.33
ERCC2-203ENST00000391944 NBPF14Q5TI25 921 aa23.34■■□□□ 1.33
ERCC2-203ENST00000391944 NBPF10Q6P3W6 841 aaKnown RBP23.34■■□□□ 1.33
ERCC2-203ENST00000391944 NBPF15Q8N660 670 aa23.34■■□□□ 1.33
ERCC2-203ENST00000391944 BTG4Q9NY30 223 aa23.34■■□□□ 1.33
ERCC2-203ENST00000391944 ARFGEF2Q9Y6D5 1785 aa23.34■■□□□ 1.33
ERCC2-203ENST00000391944 AK9Q5TCS8 1911 aa23.33■■□□□ 1.32
ERCC2-203ENST00000391944 CIZ1Q9ULV3 898 aaPredicted RBP23.32■■□□□ 1.32
ERCC2-203ENST00000391944 TNS2Q63HR2 1409 aa23.32■■□□□ 1.32
ERCC2-203ENST00000391944 G3BP1Q13283 466 aaKnown RBP eCLIP23.32■■□□□ 1.32
ERCC2-203ENST00000391944 COL15A1P39059 1388 aa23.31■■□□□ 1.32
ERCC2-203ENST00000391944 AFDNP55196 1824 aaKnown RBP23.31■■□□□ 1.32
ERCC2-203ENST00000391944 GLRX3O76003 335 aaKnown RBP23.31■■□□□ 1.32
ERCC2-203ENST00000391944 EPHA10Q5JZY3 1008 aa23.31■■□□□ 1.32
ERCC2-203ENST00000391944 EPB41L2O43491 1005 aaKnown RBP23.3■■□□□ 1.32
ERCC2-203ENST00000391944 PTCD1O75127 700 aaKnown RBP23.3■■□□□ 1.32
ERCC2-203ENST00000391944 SASH1O94885 1247 aa23.3■■□□□ 1.32
ERCC2-203ENST00000391944 CNTROBQ8N137 903 aa23.3■■□□□ 1.32
ERCC2-203ENST00000391944 ROBO1Q9Y6N7 1651 aa23.3■■□□□ 1.32
ERCC2-203ENST00000391944 COL14A1Q05707 1796 aaKnown RBP23.3■■□□□ 1.32
ERCC2-203ENST00000391944 HSP90AA1P07900 732 aaKnown RBP23.3■■□□□ 1.32
ERCC2-203ENST00000391944 ECHDC1Q9NTX5 307 aa23.3■■□□□ 1.32
ERCC2-203ENST00000391944 TOGARAM1Q9Y4F4 1720 aa23.29■■□□□ 1.32
ERCC2-203ENST00000391944 MAP4K4O95819 1239 aaPredicted RBP23.29■■□□□ 1.32
ERCC2-203ENST00000391944 IFIT2P09913 472 aaKnown RBP23.29■■□□□ 1.32
ERCC2-203ENST00000391944 GSE1Q14687 1217 aa23.28■■□□□ 1.32
ERCC2-203ENST00000391944 GPATCH3Q96I76 525 aa23.28■■□□□ 1.32
ERCC2-203ENST00000391944 ATP5J2-PTCD1G3V325 749 aa23.28■■□□□ 1.32
ERCC2-203ENST00000391944 ST18O60284 1047 aa23.28■■□□□ 1.32
ERCC2-203ENST00000391944 A1BGP04217 495 aa23.28■■□□□ 1.32
ERCC2-203ENST00000391944 ANO2Q9NQ90 1003 aa23.28■■□□□ 1.32
ERCC2-203ENST00000391944 TMOD3Q9NYL9 352 aa23.28■■□□□ 1.32
ERCC2-203ENST00000391944 AHDC1Q5TGY3 1603 aaPredicted RBP23.28■■□□□ 1.32
ERCC2-203ENST00000391944 MCCP23508 829 aa23.27■■□□□ 1.32
ERCC2-203ENST00000391944 RABL6Q3YEC7 729 aaPredicted RBP23.27■■□□□ 1.32
ERCC2-203ENST00000391944 A0A087WZG4 1122 aa23.27■■□□□ 1.32
ERCC2-203ENST00000391944 UBE3BQ7Z3V4 1068 aa23.27■■□□□ 1.32
ERCC2-203ENST00000391944 CASP7P55210 303 aa23.26■■□□□ 1.31
ERCC2-203ENST00000391944 ANAPC15P60006 121 aa23.26■■□□□ 1.31
ERCC2-203ENST00000391944 TTLL7Q6ZT98 887 aa23.26■■□□□ 1.31
ERCC2-203ENST00000391944 AACSQ86V21 672 aa23.26■■□□□ 1.31
ERCC2-203ENST00000391944 COL22A1Q8NFW1 1626 aaPredicted RBP23.26■■□□□ 1.31
ERCC2-203ENST00000391944 MCM4P33991 863 aa23.26■■□□□ 1.31
ERCC2-203ENST00000391944 COPRSQ9NQ92 184 aa23.26■■□□□ 1.31
ERCC2-203ENST00000391944 DISP2A7MBM2 1401 aa23.25■■□□□ 1.31
ERCC2-203ENST00000391944 EAF2Q96CJ1 260 aaPredicted RBP23.25■■□□□ 1.31
ERCC2-203ENST00000391944 IL17RAQ96F46 866 aa23.25■■□□□ 1.31
ERCC2-203ENST00000391944 JARID2Q92833 1246 aaPredicted RBP23.25■■□□□ 1.31
ERCC2-203ENST00000391944 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.25■■□□□ 1.31
ERCC2-203ENST00000391944 NUP188Q5SRE5 1749 aa23.24■■□□□ 1.31
ERCC2-203ENST00000391944 SGSM2O43147 1006 aa23.24■■□□□ 1.31
ERCC2-203ENST00000391944 RFX5P48382 616 aaPredicted RBP23.24■■□□□ 1.31
ERCC2-203ENST00000391944 SIL1Q9H173 461 aa23.24■■□□□ 1.31
ERCC2-203ENST00000391944 IL25Q9H293 177 aa23.24■■□□□ 1.31
ERCC2-203ENST00000391944 H7C1W4 665 aa23.24■■□□□ 1.31
ERCC2-203ENST00000391944 KLHDC4Q8TBB5 520 aa23.24■■□□□ 1.31
ERCC2-203ENST00000391944 PIGBQ92521 554 aa23.23■■□□□ 1.31
ERCC2-203ENST00000391944 FOXD4L1Q9NU39 408 aa23.23■■□□□ 1.31
ERCC2-203ENST00000391944 PTPN12Q05209 780 aaKnown RBP23.22■■□□□ 1.31
ERCC2-203ENST00000391944 RAB3GAP1Q15042 981 aa23.22■■□□□ 1.31
ERCC2-203ENST00000391944 VSIG10Q8N0Z9 540 aa23.22■■□□□ 1.31
ERCC2-203ENST00000391944 TEX13AQ9BXU3 409 aaPredicted RBP23.22■■□□□ 1.31
ERCC2-203ENST00000391944 COL16A1Q07092 1604 aaPredicted RBP23.22■■□□□ 1.31
ERCC2-203ENST00000391944 CWC25Q9NXE8 425 aaPredicted RBP23.21■■□□□ 1.31
ERCC2-203ENST00000391944 PALD1Q9ULE6 856 aa23.21■■□□□ 1.31
ERCC2-203ENST00000391944 CCDC8Q9H0W5 538 aaPredicted RBP23.21■■□□□ 1.31
ERCC2-203ENST00000391944 ASAP1Q9ULH1 1129 aa23.21■■□□□ 1.31
ERCC2-203ENST00000391944 ITGB4P16144 1822 aa23.2■■□□□ 1.3
ERCC2-203ENST00000391944 NEK4P51957 841 aa23.2■■□□□ 1.3
ERCC2-203ENST00000391944 CCDC191Q8NCU4 936 aa23.2■■□□□ 1.3
ERCC2-203ENST00000391944 EVI5LQ96CN4 794 aa23.2■■□□□ 1.3
ERCC2-203ENST00000391944 HSPA4P34932 840 aa23.19■■□□□ 1.3
ERCC2-203ENST00000391944 TNPO1Q92973 898 aaKnown RBP23.19■■□□□ 1.3
ERCC2-203ENST00000391944 ATG3Q9NT62 314 aa23.19■■□□□ 1.3
ERCC2-203ENST00000391944 ZBTB3Q9H5J0 574 aa23.19■■□□□ 1.3
ERCC2-203ENST00000391944 PLCH1Q4KWH8 1693 aa23.18■■□□□ 1.3
ERCC2-203ENST00000391944 LTBP4Q8N2S1 1624 aa23.18■■□□□ 1.3
ERCC2-203ENST00000391944 MCM2P49736 904 aa23.18■■□□□ 1.3
ERCC2-203ENST00000391944 FOXO4P98177 505 aa23.18■■□□□ 1.3
ERCC2-203ENST00000391944 RAD50Q92878 1312 aa23.18■■□□□ 1.3
ERCC2-203ENST00000391944 LMBR1LQ6UX01 489 aa23.17■■□□□ 1.3
ERCC2-203ENST00000391944 CWC27Q6UX04 472 aaKnown RBP23.17■■□□□ 1.3
ERCC2-203ENST00000391944 RUFY2Q8WXA3 655 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms