RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 ANTXR1Q9H6X2 564 aa22.34■■□□□ 1.17
ACTN4-202ENST00000390009 AK9Q5TCS8 1911 aa22.34■■□□□ 1.17
ACTN4-202ENST00000390009 TNS2Q63HR2 1409 aa22.34■■□□□ 1.17
ACTN4-202ENST00000390009 USP26Q9BXU7 913 aa22.34■■□□□ 1.17
ACTN4-202ENST00000390009 BICC1Q9H694 974 aaKnown RBP22.34■■□□□ 1.17
ACTN4-202ENST00000390009 OS9Q13438 667 aaPredicted RBP22.33■■□□□ 1.16
ACTN4-202ENST00000390009 PLCH1Q4KWH8 1693 aa22.32■■□□□ 1.16
ACTN4-202ENST00000390009 NBPF26B4DH59 902 aa22.31■■□□□ 1.16
ACTN4-202ENST00000390009 PTCD1O75127 700 aaKnown RBP22.31■■□□□ 1.16
ACTN4-202ENST00000390009 NBPF14Q5TI25 921 aa22.31■■□□□ 1.16
ACTN4-202ENST00000390009 NBPF10Q6P3W6 841 aaKnown RBP22.31■■□□□ 1.16
ACTN4-202ENST00000390009 NBPF15Q8N660 670 aa22.31■■□□□ 1.16
ACTN4-202ENST00000390009 DISP2A7MBM2 1401 aa22.31■■□□□ 1.16
ACTN4-202ENST00000390009 ITGB4P16144 1822 aa22.31■■□□□ 1.16
ACTN4-202ENST00000390009 TRIM6-TRIM34B2RNG4 842 aa22.31■■□□□ 1.16
ACTN4-202ENST00000390009 ERC2O15083 957 aa22.31■■□□□ 1.16
ACTN4-202ENST00000390009 REC8O95072 547 aa22.31■■□□□ 1.16
ACTN4-202ENST00000390009 PLBD2Q8NHP8 589 aa22.31■■□□□ 1.16
ACTN4-202ENST00000390009 TMOD3Q9NYL9 352 aa22.31■■□□□ 1.16
ACTN4-202ENST00000390009 PA2G4Q9UQ80 394 aaKnown RBP22.31■■□□□ 1.16
ACTN4-202ENST00000390009 SPRYD3Q8NCJ5 442 aa22.3■■□□□ 1.16
ACTN4-202ENST00000390009 RILPL2Q969X0 211 aa22.3■■□□□ 1.16
ACTN4-202ENST00000390009 NUP188Q5SRE5 1749 aa22.3■■□□□ 1.16
ACTN4-202ENST00000390009 ERC1Q8IUD2 1116 aa22.29■■□□□ 1.16
ACTN4-202ENST00000390009 PHLPP1O60346 1717 aa22.29■■□□□ 1.16
ACTN4-202ENST00000390009 WNK3Q9BYP7 1800 aa22.29■■□□□ 1.16
ACTN4-202ENST00000390009 PI4K2BQ8TCG2 481 aa22.28■■□□□ 1.16
ACTN4-202ENST00000390009 A1BGP04217 495 aa22.28■■□□□ 1.16
ACTN4-202ENST00000390009 UNC5CLQ8IV45 518 aa22.28■■□□□ 1.16
ACTN4-202ENST00000390009 RBM42Q9BTD8 480 aaKnown RBP22.28■■□□□ 1.16
ACTN4-202ENST00000390009 CLASRPQ8N2M8 674 aaKnown RBP22.27■■□□□ 1.16
ACTN4-202ENST00000390009 DEKP35659 375 aaKnown RBP22.27■■□□□ 1.15
ACTN4-202ENST00000390009 ATP5J2-PTCD1G3V325 749 aa22.26■■□□□ 1.15
ACTN4-202ENST00000390009 CHMLP26374 656 aa22.26■■□□□ 1.15
ACTN4-202ENST00000390009 ESYT1Q9BSJ8 1104 aa22.26■■□□□ 1.15
ACTN4-202ENST00000390009 USP42Q9H9J4 1324 aaKnown RBP22.26■■□□□ 1.15
ACTN4-202ENST00000390009 EPHA10Q5JZY3 1008 aa22.25■■□□□ 1.15
ACTN4-202ENST00000390009 KAT6BQ8WYB5 2073 aa22.25■■□□□ 1.15
ACTN4-202ENST00000390009 CD2BP2O95400 341 aaKnown RBP22.25■■□□□ 1.15
ACTN4-202ENST00000390009 TTLL7Q6ZT98 887 aa22.25■■□□□ 1.15
ACTN4-202ENST00000390009 PIGBQ92521 554 aa22.25■■□□□ 1.15
ACTN4-202ENST00000390009 TTC41PQ6P2S7 1318 aa22.25■■□□□ 1.15
ACTN4-202ENST00000390009 FRAT2O75474 233 aaPredicted RBP22.24■■□□□ 1.15
ACTN4-202ENST00000390009 RABEP1Q15276 862 aa22.24■■□□□ 1.15
ACTN4-202ENST00000390009 COL15A1P39059 1388 aa22.24■■□□□ 1.15
ACTN4-202ENST00000390009 G3BP1Q13283 466 aaKnown RBP eCLIP22.24■■□□□ 1.153e-10■■□□□ 13.1
ACTN4-202ENST00000390009 UBE3BQ7Z3V4 1068 aa22.24■■□□□ 1.15
ACTN4-202ENST00000390009 JARID2Q92833 1246 aaPredicted RBP22.24■■□□□ 1.15
ACTN4-202ENST00000390009 A0A087WZG4 1122 aa22.23■■□□□ 1.15
ACTN4-202ENST00000390009 ASAP1Q9ULH1 1129 aa22.23■■□□□ 1.15
ACTN4-202ENST00000390009 LRP6O75581 1613 aa22.23■■□□□ 1.15
ACTN4-202ENST00000390009 SASH1O94885 1247 aa22.22■■□□□ 1.15
ACTN4-202ENST00000390009 MAP4K4O95819 1239 aaPredicted RBP22.22■■□□□ 1.15
ACTN4-202ENST00000390009 NRAPQ86VF7 1730 aa22.21■■□□□ 1.15
ACTN4-202ENST00000390009 K7ELQ4 463 aaPredicted RBP22.21■■□□□ 1.15
ACTN4-202ENST00000390009 IFIT2P09913 472 aaKnown RBP22.21■■□□□ 1.15
ACTN4-202ENST00000390009 TJP1Q07157 1748 aa22.21■■□□□ 1.15
ACTN4-202ENST00000390009 EXOC5O00471 708 aa22.21■■□□□ 1.15
ACTN4-202ENST00000390009 GLRX3O76003 335 aaKnown RBP22.21■■□□□ 1.15
ACTN4-202ENST00000390009 CASP7P55210 303 aa22.21■■□□□ 1.15
ACTN4-202ENST00000390009 RABL6Q3YEC7 729 aaPredicted RBP22.21■■□□□ 1.15
ACTN4-202ENST00000390009 VSIG10Q8N0Z9 540 aa22.21■■□□□ 1.15
ACTN4-202ENST00000390009 KLHDC4Q8TBB5 520 aa22.21■■□□□ 1.15
ACTN4-202ENST00000390009 SIL1Q9H173 461 aa22.21■■□□□ 1.15
ACTN4-202ENST00000390009 ATG3Q9NT62 314 aa22.21■■□□□ 1.15
ACTN4-202ENST00000390009 ADAMTS2O95450 1211 aa22.2■■□□□ 1.14
ACTN4-202ENST00000390009 AACSQ86V21 672 aa22.2■■□□□ 1.14
ACTN4-202ENST00000390009 CNTROBQ8N137 903 aa22.2■■□□□ 1.14
ACTN4-202ENST00000390009 GPATCH3Q96I76 525 aa22.19■■□□□ 1.14
ACTN4-202ENST00000390009 ZBTB3Q9H5J0 574 aa22.19■■□□□ 1.14
ACTN4-202ENST00000390009 ECHDC1Q9NTX5 307 aa22.19■■□□□ 1.14
ACTN4-202ENST00000390009 CHMP5Q9NZZ3 219 aa22.19■■□□□ 1.14
ACTN4-202ENST00000390009 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.19■■□□□ 1.14
ACTN4-202ENST00000390009 TEX13AQ9BXU3 409 aaPredicted RBP22.19■■□□□ 1.14
ACTN4-202ENST00000390009 BCL9O00512 1426 aa22.19■■□□□ 1.14
ACTN4-202ENST00000390009 COPRSQ9NQ92 184 aa22.18■■□□□ 1.14
ACTN4-202ENST00000390009 CWC25Q9NXE8 425 aaPredicted RBP22.18■■□□□ 1.14
ACTN4-202ENST00000390009 RFX5P48382 616 aaPredicted RBP22.18■■□□□ 1.14
ACTN4-202ENST00000390009 DNAJC10Q8IXB1 793 aa22.18■■□□□ 1.14
ACTN4-202ENST00000390009 EAF2Q96CJ1 260 aaPredicted RBP22.18■■□□□ 1.14
ACTN4-202ENST00000390009 ANO2Q9NQ90 1003 aa22.18■■□□□ 1.14
ACTN4-202ENST00000390009 H7C1W4 665 aa22.17■■□□□ 1.14
ACTN4-202ENST00000390009 DDIT3P35638 169 aa22.16■■□□□ 1.14
ACTN4-202ENST00000390009 DOT1LQ8TEK3 1739 aa22.16■■□□□ 1.14
ACTN4-202ENST00000390009 PTPN12Q05209 780 aaKnown RBP22.16■■□□□ 1.14
ACTN4-202ENST00000390009 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.16■■□□□ 1.14
ACTN4-202ENST00000390009 CCDC191Q8NCU4 936 aa22.15■■□□□ 1.14
ACTN4-202ENST00000390009 IL25Q9H293 177 aa22.15■■□□□ 1.14
ACTN4-202ENST00000390009 SPATA31A1Q5TZJ5 1347 aa22.15■■□□□ 1.14
ACTN4-202ENST00000390009 STARD3NLO95772 234 aa22.15■■□□□ 1.14
ACTN4-202ENST00000390009 HSP90AA1P07900 732 aaKnown RBP22.15■■□□□ 1.14
ACTN4-202ENST00000390009 MCCP23508 829 aa22.14■■□□□ 1.13
ACTN4-202ENST00000390009 CDCA7Q9BWT1 371 aaPredicted RBP22.14■■□□□ 1.13
ACTN4-202ENST00000390009 CCDC8Q9H0W5 538 aaPredicted RBP22.14■■□□□ 1.13
ACTN4-202ENST00000390009 ZNF330Q9Y3S2 320 aaPredicted RBP22.14■■□□□ 1.13
ACTN4-202ENST00000390009 FOXO4P98177 505 aa22.13■■□□□ 1.13
ACTN4-202ENST00000390009 ST18O60284 1047 aa22.13■■□□□ 1.13
ACTN4-202ENST00000390009 PIP4K2BP78356 416 aa22.13■■□□□ 1.13
ACTN4-202ENST00000390009 LMBR1LQ6UX01 489 aa22.13■■□□□ 1.13
ACTN4-202ENST00000390009 SYTL4Q96C24 671 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms