RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 NCBP3Q53F19 620 aaKnown RBP22.46■■□□□ 1.19
PPFIA1-202ENST00000389547 ZNF496Q96IT1 587 aaPredicted RBP22.46■■□□□ 1.19
PPFIA1-202ENST00000389547 HS1BP3Q53T59 392 aa22.46■■□□□ 1.19
PPFIA1-202ENST00000389547 ANKRD44Q8N8A2 993 aa22.46■■□□□ 1.19
PPFIA1-202ENST00000389547 FSD1Q9BTV5 496 aa22.46■■□□□ 1.19
PPFIA1-202ENST00000389547 CWC22Q9HCG8 908 aaKnown RBP22.46■■□□□ 1.19
PPFIA1-202ENST00000389547 RIMS1Q86UR5 1692 aaKnown RBP22.45■■□□□ 1.18
PPFIA1-202ENST00000389547 PHF23Q9BUL5 403 aaPredicted RBP22.45■■□□□ 1.18
PPFIA1-202ENST00000389547 EIF4A1P60842 406 aaKnown RBP22.45■■□□□ 1.18
PPFIA1-202ENST00000389547 SMC5Q8IY18 1101 aa22.45■■□□□ 1.18
PPFIA1-202ENST00000389547 PRIMPOLQ96LW4 560 aa22.44■■□□□ 1.18
PPFIA1-202ENST00000389547 DLC1Q96QB1 1528 aa22.44■■□□□ 1.18
PPFIA1-202ENST00000389547 ERBB3P21860 1342 aa22.44■■□□□ 1.18
PPFIA1-202ENST00000389547 TPD52L1Q16890 204 aaPredicted RBP22.44■■□□□ 1.18
PPFIA1-202ENST00000389547 CCDC8Q9H0W5 538 aaPredicted RBP22.44■■□□□ 1.18
PPFIA1-202ENST00000389547 NUCB1Q02818 461 aa22.44■■□□□ 1.18
PPFIA1-202ENST00000389547 ANKARQ7Z5J8 1434 aa22.44■■□□□ 1.18
PPFIA1-202ENST00000389547 RUFY2Q8WXA3 655 aa22.44■■□□□ 1.18
PPFIA1-202ENST00000389547 TTC12Q9H892 705 aaPredicted RBP22.44■■□□□ 1.18
PPFIA1-202ENST00000389547 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.43■■□□□ 1.18
PPFIA1-202ENST00000389547 MX1P20591 662 aa22.43■■□□□ 1.18
PPFIA1-202ENST00000389547 CEP85Q6P2H3 762 aa22.43■■□□□ 1.18
PPFIA1-202ENST00000389547 CNTROBQ8N137 903 aa22.43■■□□□ 1.18
PPFIA1-202ENST00000389547 KSR2Q6VAB6 950 aa22.43■■□□□ 1.18
PPFIA1-202ENST00000389547 ZNF853P0CG23 659 aa22.42■■□□□ 1.18
PPFIA1-202ENST00000389547 NOLC1Q14978 699 aaKnown RBP eCLIP22.42■■□□□ 1.18
PPFIA1-202ENST00000389547 DDB1Q16531 1140 aa22.42■■□□□ 1.18
PPFIA1-202ENST00000389547 NEURL4Q96JN8 1562 aa22.42■■□□□ 1.18
PPFIA1-202ENST00000389547 KIF1BPQ96EK5 621 aa22.42■■□□□ 1.18
PPFIA1-202ENST00000389547 CCDC57Q2TAC2 916 aa22.42■■□□□ 1.18
PPFIA1-202ENST00000389547 CCDC112Q8NEF3 446 aa22.42■■□□□ 1.18
PPFIA1-202ENST00000389547 PRAMEF22A3QJZ6 481 aa22.41■■□□□ 1.18
PPFIA1-202ENST00000389547 KIF20AO95235 890 aa22.41■■□□□ 1.18
PPFIA1-202ENST00000389547 PA2G4Q9UQ80 394 aaKnown RBP22.41■■□□□ 1.18
PPFIA1-202ENST00000389547 FIBPO43427 364 aa22.41■■□□□ 1.18
PPFIA1-202ENST00000389547 PPP1R9BQ96SB3 815 aa22.41■■□□□ 1.18
PPFIA1-202ENST00000389547 SLC52A2Q9HAB3 445 aa22.41■■□□□ 1.18
PPFIA1-202ENST00000389547 TOMM22Q9NS69 142 aa22.41■■□□□ 1.18
PPFIA1-202ENST00000389547 TECPR2O15040 1411 aa22.41■■□□□ 1.18
PPFIA1-202ENST00000389547 PTCH1Q13635 1447 aa22.41■■□□□ 1.18
PPFIA1-202ENST00000389547 CNNM1Q9NRU3 951 aa22.41■■□□□ 1.18
PPFIA1-202ENST00000389547 ERC1Q8IUD2 1116 aa22.4■■□□□ 1.18
PPFIA1-202ENST00000389547 GDPD2Q9HCC8 539 aa22.4■■□□□ 1.18
PPFIA1-202ENST00000389547 LRSAM1Q6UWE0 723 aa22.4■■□□□ 1.18
PPFIA1-202ENST00000389547 SNX21Q969T3 373 aa22.4■■□□□ 1.18
PPFIA1-202ENST00000389547 USP16Q9Y5T5 823 aa22.4■■□□□ 1.18
PPFIA1-202ENST00000389547 MYO3AQ8NEV4 1616 aa22.4■■□□□ 1.18
PPFIA1-202ENST00000389547 TEX35Q5T0J7 233 aa22.39■■□□□ 1.18
PPFIA1-202ENST00000389547 A1BGP04217 495 aa22.39■■□□□ 1.17
PPFIA1-202ENST00000389547 HSP90B1P14625 803 aaKnown RBP22.39■■□□□ 1.17
PPFIA1-202ENST00000389547 CWC27Q6UX04 472 aaKnown RBP22.39■■□□□ 1.17
PPFIA1-202ENST00000389547 ATP6V1DQ9Y5K8 247 aa22.39■■□□□ 1.17
PPFIA1-202ENST00000389547 PHKG2P15735 406 aa22.39■■□□□ 1.17
PPFIA1-202ENST00000389547 CEP170BQ9Y4F5 1589 aaPredicted RBP22.39■■□□□ 1.17
PPFIA1-202ENST00000389547 OTUD7AQ8TE49 926 aaPredicted RBP22.38■■□□□ 1.17
PPFIA1-202ENST00000389547 BOLA2Q9H3K6 86 aa22.38■■□□□ 1.17
PPFIA1-202ENST00000389547 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.38■■□□□ 1.17
PPFIA1-202ENST00000389547 GOLGA6L19H0YKK7 550 aa22.38■■□□□ 1.17
PPFIA1-202ENST00000389547 PDIA4P13667 645 aaKnown RBP22.38■■□□□ 1.17
PPFIA1-202ENST00000389547 TRIM5Q9C035 493 aa22.38■■□□□ 1.17
PPFIA1-202ENST00000389547 DDX21Q9NR30 783 aaKnown RBP eCLIP22.38■■□□□ 1.17
PPFIA1-202ENST00000389547 CD163L1Q9NR16 1453 aa22.38■■□□□ 1.17
PPFIA1-202ENST00000389547 ARHGEF28Q8N1W1 1705 aaKnown RBP22.37■■□□□ 1.17
PPFIA1-202ENST00000389547 APPP05067 770 aa22.37■■□□□ 1.17
PPFIA1-202ENST00000389547 NBPF7P0C2Y1 421 aaPredicted RBP22.37■■□□□ 1.17
PPFIA1-202ENST00000389547 WASHC4Q2M389 1173 aa22.37■■□□□ 1.17
PPFIA1-202ENST00000389547 GRM8O00222 908 aa22.37■■□□□ 1.17
PPFIA1-202ENST00000389547 ZKSCAN1P17029 563 aaPredicted RBP22.37■■□□□ 1.17
PPFIA1-202ENST00000389547 TBC1D9Q6ZT07 1266 aa22.37■■□□□ 1.17
PPFIA1-202ENST00000389547 PCDH11XQ9BZA7 1347 aa22.36■■□□□ 1.17
PPFIA1-202ENST00000389547 PCDH11YQ9BZA8 1340 aa22.36■■□□□ 1.17
PPFIA1-202ENST00000389547 GIGYF1O75420 1035 aaPredicted RBP22.36■■□□□ 1.17
PPFIA1-202ENST00000389547 SPATA31A3Q5VYP0 1347 aa22.36■■□□□ 1.17
PPFIA1-202ENST00000389547 ADCY5O95622 1261 aa22.36■■□□□ 1.17
PPFIA1-202ENST00000389547 DMTNQ08495 405 aa22.36■■□□□ 1.17
PPFIA1-202ENST00000389547 C17orf53Q8N3J3 647 aaPredicted RBP22.36■■□□□ 1.17
PPFIA1-202ENST00000389547 DCTPP1Q9H773 170 aa22.36■■□□□ 1.17
PPFIA1-202ENST00000389547 TPM3P06753 285 aa22.36■■□□□ 1.17
PPFIA1-202ENST00000389547 VPS37CA5D8V6 355 aaPredicted RBP22.35■■□□□ 1.17
PPFIA1-202ENST00000389547 VPS37DQ86XT2 251 aa22.35■■□□□ 1.17
PPFIA1-202ENST00000389547 LINS1Q8NG48 757 aa22.35■■□□□ 1.17
PPFIA1-202ENST00000389547 TBC1D2BQ9UPU7 963 aa22.35■■□□□ 1.17
PPFIA1-202ENST00000389547 ATP8B2P98198 1209 aa22.35■■□□□ 1.17
PPFIA1-202ENST00000389547 CEP126Q9P2H0 1117 aa22.35■■□□□ 1.17
PPFIA1-202ENST00000389547 TRMT112Q9UI30 125 aaKnown RBP22.35■■□□□ 1.17
PPFIA1-202ENST00000389547 PROSER3Q2NL68 480 aa22.34■■□□□ 1.17
PPFIA1-202ENST00000389547 FAM184AQ8NB25 1140 aa22.34■■□□□ 1.17
PPFIA1-202ENST00000389547 MED14O60244 1454 aa22.34■■□□□ 1.17
PPFIA1-202ENST00000389547 U2AF2P26368 475 aaKnown RBP eCLIP22.34■■□□□ 1.173e-12■■■■□ 21.2
PPFIA1-202ENST00000389547 REREQ9P2R6 1566 aa22.34■■□□□ 1.17
PPFIA1-202ENST00000389547 BECN2A8MW95 431 aa22.34■■□□□ 1.17
PPFIA1-202ENST00000389547 RHPN1Q8TCX5 695 aa22.34■■□□□ 1.17
PPFIA1-202ENST00000389547 FER1L4A9Z1Z3 1794 aa22.34■■□□□ 1.17
PPFIA1-202ENST00000389547 PNMA6EA0A0J9YXQ4 647 aa22.33■■□□□ 1.17
PPFIA1-202ENST00000389547 FKBP4Q02790 459 aaKnown RBP eCLIP22.33■■□□□ 1.17
PPFIA1-202ENST00000389547 C16orf45Q96MC5 204 aaPredicted RBP22.33■■□□□ 1.17
PPFIA1-202ENST00000389547 ZNF500O60304 480 aaPredicted RBP22.33■■□□□ 1.17
PPFIA1-202ENST00000389547 BMP2KLQ5H9B9 411 aa22.33■■□□□ 1.17
PPFIA1-202ENST00000389547 LRRC7Q96NW7 1537 aa22.33■■□□□ 1.17
PPFIA1-202ENST00000389547 GNL2Q13823 731 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms