RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 ZBTB40Q9NUA8 1239 aa15.56■□□□□ 0.08
PTPRN2-202ENST00000389416 PRPF40AO75400 957 aaKnown RBP15.56■□□□□ 0.08
PTPRN2-202ENST00000389416 USP5P45974 858 aa15.56■□□□□ 0.08
PTPRN2-202ENST00000389416 IL17REQ8NFR9 667 aa15.56■□□□□ 0.08
PTPRN2-202ENST00000389416 EVI5LQ96CN4 794 aa15.56■□□□□ 0.08
PTPRN2-202ENST00000389416 CDCA7Q9BWT1 371 aaPredicted RBP15.56■□□□□ 0.08
PTPRN2-202ENST00000389416 TFCP2L1Q9NZI6 479 aa15.56■□□□□ 0.08
PTPRN2-202ENST00000389416 DCAF8L1A6NGE4 600 aa15.55■□□□□ 0.08
PTPRN2-202ENST00000389416 TET3O43151 1660 aa15.55■□□□□ 0.08
PTPRN2-202ENST00000389416 KIF1BO60333 1816 aa15.55■□□□□ 0.08
PTPRN2-202ENST00000389416 USP21Q9UK80 565 aa15.55■□□□□ 0.08
PTPRN2-202ENST00000389416 A2ML1A8K2U0 1454 aa15.55■□□□□ 0.08
PTPRN2-202ENST00000389416 CEP85Q6P2H3 762 aa15.55■□□□□ 0.08
PTPRN2-202ENST00000389416 DNAJC10Q8IXB1 793 aa15.55■□□□□ 0.08
PTPRN2-202ENST00000389416 PIBF1Q8WXW3 757 aa15.55■□□□□ 0.08
PTPRN2-202ENST00000389416 CDC42BPBQ9Y5S2 1711 aa15.55■□□□□ 0.08
PTPRN2-202ENST00000389416 TTC22Q5TAA0 569 aa15.55■□□□□ 0.08
PTPRN2-202ENST00000389416 DDX11Q96FC9 970 aa15.55■□□□□ 0.08
PTPRN2-202ENST00000389416 GNPATO15228 680 aa15.54■□□□□ 0.08
PTPRN2-202ENST00000389416 KCNQ3O43525 872 aa15.54■□□□□ 0.08
PTPRN2-202ENST00000389416 ARHGEF25Q86VW2 580 aa15.54■□□□□ 0.08
PTPRN2-202ENST00000389416 ANKRD18AQ8IVF6 992 aa15.54■□□□□ 0.08
PTPRN2-202ENST00000389416 HELBQ8NG08 1087 aaPredicted RBP15.54■□□□□ 0.08
PTPRN2-202ENST00000389416 KIAA0232Q92628 1395 aa15.54■□□□□ 0.08
PTPRN2-202ENST00000389416 PDE1AP54750 535 aa15.54■□□□□ 0.08
PTPRN2-202ENST00000389416 ATP2B3Q16720 1220 aa15.54■□□□□ 0.08
PTPRN2-202ENST00000389416 FAM89AQ96GI7 184 aa15.54■□□□□ 0.08
PTPRN2-202ENST00000389416 UTP14AQ9BVJ6 771 aaKnown RBP15.54■□□□□ 0.08
PTPRN2-202ENST00000389416 LARP6Q9BRS8 491 aaKnown RBP15.53■□□□□ 0.08
PTPRN2-202ENST00000389416 WWC3Q9ULE0 1092 aa15.53■□□□□ 0.08
PTPRN2-202ENST00000389416 KDM5AP29375 1690 aaKnown RBP15.53■□□□□ 0.08
PTPRN2-202ENST00000389416 IRS4O14654 1257 aaPredicted RBP15.53■□□□□ 0.08
PTPRN2-202ENST00000389416 POLR3DP05423 398 aaPredicted RBP15.53■□□□□ 0.08
PTPRN2-202ENST00000389416 SDSP20132 328 aa15.53■□□□□ 0.08
PTPRN2-202ENST00000389416 SASS6Q6UVJ0 657 aa15.53■□□□□ 0.08
PTPRN2-202ENST00000389416 TMOD2Q9NZR1 351 aa15.53■□□□□ 0.08
PTPRN2-202ENST00000389416 ABCA9Q8IUA7 1624 aa15.53■□□□□ 0.08
PTPRN2-202ENST00000389416 INSRP06213 1382 aa15.53■□□□□ 0.08
PTPRN2-202ENST00000389416 CCDC47Q96A33 483 aaKnown RBP15.53■□□□□ 0.08
PTPRN2-202ENST00000389416 STK38Q15208 465 aa15.52■□□□□ 0.08
PTPRN2-202ENST00000389416 HOOK1Q9UJC3 728 aaKnown RBP15.52■□□□□ 0.08
PTPRN2-202ENST00000389416 ST5P78524 1137 aa15.52■□□□□ 0.08
PTPRN2-202ENST00000389416 TPTE2Q6XPS3 522 aa15.52■□□□□ 0.08
PTPRN2-202ENST00000389416 CCDC43Q96MW1 224 aaKnown RBP15.52■□□□□ 0.08
PTPRN2-202ENST00000389416 BABAM1Q9NWV8 329 aa15.52■□□□□ 0.08
PTPRN2-202ENST00000389416 USP6P35125 1406 aa15.52■□□□□ 0.07
PTPRN2-202ENST00000389416 CAVIN1Q6NZI2 390 aaKnown RBP15.52■□□□□ 0.07
PTPRN2-202ENST00000389416 CCNL1Q9UK58 526 aaPredicted RBP15.52■□□□□ 0.07
PTPRN2-202ENST00000389416 KDM5CP41229 1560 aa15.52■□□□□ 0.07
PTPRN2-202ENST00000389416 ZBTB7BO15156 539 aaPredicted RBP15.52■□□□□ 0.07
PTPRN2-202ENST00000389416 TRAK2O60296 914 aa15.52■□□□□ 0.07
PTPRN2-202ENST00000389416 IL15P40933 162 aaPredicted RBP15.52■□□□□ 0.07
PTPRN2-202ENST00000389416 EIF4A1P60842 406 aaKnown RBP15.52■□□□□ 0.07
PTPRN2-202ENST00000389416 IQGAP3Q86VI3 1631 aa15.51■□□□□ 0.07
PTPRN2-202ENST00000389416 CCDC83Q8IWF9 413 aa15.51■□□□□ 0.07
PTPRN2-202ENST00000389416 ZSCAN31Q96LW9 406 aaPredicted RBP15.51■□□□□ 0.07
PTPRN2-202ENST00000389416 MKNK2Q9HBH9 465 aa15.51■□□□□ 0.07
PTPRN2-202ENST00000389416 USP19O94966 1318 aa15.51■□□□□ 0.07
PTPRN2-202ENST00000389416 RNF214Q8ND24 703 aa15.51■□□□□ 0.07
PTPRN2-202ENST00000389416 DCTPP1Q9H773 170 aa15.51■□□□□ 0.07
PTPRN2-202ENST00000389416 ZNF213O14771 459 aa15.51■□□□□ 0.07
PTPRN2-202ENST00000389416 HAND2P61296 217 aa15.51■□□□□ 0.07
PTPRN2-202ENST00000389416 BICC1Q9H694 974 aaKnown RBP15.51■□□□□ 0.07
PTPRN2-202ENST00000389416 SHROOM2Q13796 1616 aa15.51■□□□□ 0.07
PTPRN2-202ENST00000389416 FAM135BQ49AJ0 1406 aa15.51■□□□□ 0.07
PTPRN2-202ENST00000389416 WDR33Q9C0J8 1336 aaKnown RBP15.5■□□□□ 0.07
PTPRN2-202ENST00000389416 CCDC82Q8N4S0 544 aa15.5■□□□□ 0.07
PTPRN2-202ENST00000389416 RANBP6O60518 1105 aaKnown RBP15.5■□□□□ 0.07
PTPRN2-202ENST00000389416 HOXB7P09629 217 aa15.5■□□□□ 0.07
PTPRN2-202ENST00000389416 PHKG2P15735 406 aa15.5■□□□□ 0.07
PTPRN2-202ENST00000389416 FERMT3Q86UX7 667 aa15.5■□□□□ 0.07
PTPRN2-202ENST00000389416 SOS1Q07889 1333 aaPredicted RBP15.49■□□□□ 0.07
PTPRN2-202ENST00000389416 USP16Q9Y5T5 823 aa15.49■□□□□ 0.07
PTPRN2-202ENST00000389416 CLTCL1P53675 1640 aa15.49■□□□□ 0.07
PTPRN2-202ENST00000389416 CRACR2BQ8N4Y2 399 aaPredicted RBP15.49■□□□□ 0.07
PTPRN2-202ENST00000389416 PLBD2Q8NHP8 589 aa15.49■□□□□ 0.07
PTPRN2-202ENST00000389416 MPHOSPH10O00566 681 aaKnown RBP15.49■□□□□ 0.07
PTPRN2-202ENST00000389416 HCLS1P14317 486 aaPredicted RBP15.48■□□□□ 0.07
PTPRN2-202ENST00000389416 RIMBP3CA6NJZ7 1639 aa15.48■□□□□ 0.07
PTPRN2-202ENST00000389416 RIMBP3BA6NNM3 1639 aa15.48■□□□□ 0.07
PTPRN2-202ENST00000389416 RIMBP3Q9UFD9 1639 aa15.48■□□□□ 0.07
PTPRN2-202ENST00000389416 MAP3K4Q9Y6R4 1608 aa15.48■□□□□ 0.07
PTPRN2-202ENST00000389416 KINO60870 393 aaKnown RBP15.48■□□□□ 0.07
PTPRN2-202ENST00000389416 TTF1Q15361 905 aaPredicted RBP15.48■□□□□ 0.07
PTPRN2-202ENST00000389416 SLC4A8Q2Y0W8 1093 aa15.48■□□□□ 0.07
PTPRN2-202ENST00000389416 KLHDC4Q8TBB5 520 aa15.48■□□□□ 0.07
PTPRN2-202ENST00000389416 ZNF396Q96N95 335 aaPredicted RBP15.48■□□□□ 0.07
PTPRN2-202ENST00000389416 METTL22Q9BUU2 404 aaPredicted RBP15.48■□□□□ 0.07
PTPRN2-202ENST00000389416 TRAPPC3LQ5T215 181 aa15.47■□□□□ 0.07
PTPRN2-202ENST00000389416 NSFL1CQ9UNZ2 370 aaKnown RBP15.47■□□□□ 0.07
PTPRN2-202ENST00000389416 AATKQ6ZMQ8 1374 aa15.47■□□□□ 0.07
PTPRN2-202ENST00000389416 ATP7BP35670 1465 aa15.47■□□□□ 0.07
PTPRN2-202ENST00000389416 NBPF7P0C2Y1 421 aaPredicted RBP15.47■□□□□ 0.07
PTPRN2-202ENST00000389416 ME1P48163 572 aa15.47■□□□□ 0.07
PTPRN2-202ENST00000389416 UQCRFS1P1P0C7P4 283 aa15.47■□□□□ 0.07
PTPRN2-202ENST00000389416 SMC5Q8IY18 1101 aa15.47■□□□□ 0.07
PTPRN2-202ENST00000389416 RNF17Q9BXT8 1623 aaKnown RBP15.47■□□□□ 0.07
PTPRN2-202ENST00000389416 CDKL5O76039 1030 aa15.47■□□□□ 0.07
PTPRN2-202ENST00000389416 MBD3O95983 291 aa15.47■□□□□ 0.07
PTPRN2-202ENST00000389416 KRT85P78386 507 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms