RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 CALCOCO1Q9P1Z2 691 aa15.38■□□□□ 0.05
TRAPPC9-201ENST00000389328 ABCC10Q5T3U5 1492 aa15.38■□□□□ 0.05
TRAPPC9-201ENST00000389328 NOL10Q9BSC4 688 aaKnown RBP15.37■□□□□ 0.05
TRAPPC9-201ENST00000389328 CBFA2T2O43439 604 aa15.37■□□□□ 0.05
TRAPPC9-201ENST00000389328 SIRT2Q8IXJ6 389 aa15.37■□□□□ 0.05
TRAPPC9-201ENST00000389328 BRF1Q92994 677 aa15.37■□□□□ 0.05
TRAPPC9-201ENST00000389328 ADGBQ8N7X0 1667 aa15.37■□□□□ 0.05
TRAPPC9-201ENST00000389328 ABCC4O15439 1325 aa15.37■□□□□ 0.05
TRAPPC9-201ENST00000389328 PNMA6EA0A0J9YXQ4 647 aa15.37■□□□□ 0.05
TRAPPC9-201ENST00000389328 DHX8Q14562 1220 aaKnown RBP15.36■□□□□ 0.05
TRAPPC9-201ENST00000389328 BBXQ8WY36 941 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-201ENST00000389328 SETQ01105 290 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-201ENST00000389328 NCBP3Q53F19 620 aaKnown RBP15.36■□□□□ 0.05
TRAPPC9-201ENST00000389328 RRP12Q5JTH9 1297 aaKnown RBP15.36■□□□□ 0.05
TRAPPC9-201ENST00000389328 PA2G4Q9UQ80 394 aaKnown RBP15.36■□□□□ 0.05
TRAPPC9-201ENST00000389328 ERICH2A1L162 156 aa15.36■□□□□ 0.05
TRAPPC9-201ENST00000389328 MTHFSDQ2M296 383 aaKnown RBP15.36■□□□□ 0.05
TRAPPC9-201ENST00000389328 PPFIBP1Q86W92 1011 aa15.36■□□□□ 0.05
TRAPPC9-201ENST00000389328 POLR3DP05423 398 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC9-201ENST00000389328 GSDMDP57764 484 aa15.35■□□□□ 0.05
TRAPPC9-201ENST00000389328 BMS1Q14692 1282 aaKnown RBP15.35■□□□□ 0.05
TRAPPC9-201ENST00000389328 MPRIPQ6WCQ1 1025 aa15.35■□□□□ 0.05
TRAPPC9-201ENST00000389328 ERVK-7P63135 1459 aa15.35■□□□□ 0.05
TRAPPC9-201ENST00000389328 CCDC171Q6TFL3 1326 aa15.35■□□□□ 0.05
TRAPPC9-201ENST00000389328 IL13P35225 146 aa15.35■□□□□ 0.05
TRAPPC9-201ENST00000389328 CAGE1Q8TC20 777 aa15.35■□□□□ 0.05
TRAPPC9-201ENST00000389328 NEK1Q96PY6 1258 aa15.35■□□□□ 0.05
TRAPPC9-201ENST00000389328 KDM5DQ9BY66 1539 aa15.35■□□□□ 0.05
TRAPPC9-201ENST00000389328 SNX14Q9Y5W7 946 aa15.35■□□□□ 0.05
TRAPPC9-201ENST00000389328 NPHP3Q7Z494 1330 aa15.35■□□□□ 0.05
TRAPPC9-201ENST00000389328 FILIP1LQ4L180 1135 aa15.35■□□□□ 0.05
TRAPPC9-201ENST00000389328 CCDC102AQ96A19 550 aa15.35■□□□□ 0.05
TRAPPC9-201ENST00000389328 OGFRQ9NZT2 677 aa15.35■□□□□ 0.05
TRAPPC9-201ENST00000389328 SLC3A2P08195 630 aaKnown RBP15.34■□□□□ 0.05
TRAPPC9-201ENST00000389328 TOP1P11387 765 aaKnown RBP15.34■□□□□ 0.05
TRAPPC9-201ENST00000389328 AOPEPQ8N6M6 819 aa15.34■□□□□ 0.05
TRAPPC9-201ENST00000389328 ZBTB9Q96C00 473 aa15.34■□□□□ 0.05
TRAPPC9-201ENST00000389328 C8orf76Q96K31 380 aa15.34■□□□□ 0.05
TRAPPC9-201ENST00000389328 MAP3K2Q9Y2U5 619 aa15.34■□□□□ 0.05
TRAPPC9-201ENST00000389328 CCDC69A6NI79 296 aa15.34■□□□□ 0.05
TRAPPC9-201ENST00000389328 RAB11FIP4Q86YS3 637 aa15.34■□□□□ 0.05
TRAPPC9-201ENST00000389328 ZSWIM4Q9H7M6 989 aa15.34■□□□□ 0.05
TRAPPC9-201ENST00000389328 MAST1Q9Y2H9 1570 aa15.34■□□□□ 0.05
TRAPPC9-201ENST00000389328 CAVIN2O95810 425 aa15.34■□□□□ 0.05
TRAPPC9-201ENST00000389328 FEZ1Q99689 392 aa15.34■□□□□ 0.05
TRAPPC9-201ENST00000389328 AXDND1Q5T1B0 1012 aaPredicted RBP15.33■□□□□ 0.05
TRAPPC9-201ENST00000389328 JARID2Q92833 1246 aaPredicted RBP15.33■□□□□ 0.05
TRAPPC9-201ENST00000389328 TIGD1Q96MW7 591 aa15.33■□□□□ 0.05
TRAPPC9-201ENST00000389328 RUFY1Q96T51 708 aa15.33■□□□□ 0.05
TRAPPC9-201ENST00000389328 DNAI1Q9UI46 699 aa15.33■□□□□ 0.05
TRAPPC9-201ENST00000389328 CHPF2Q9P2E5 772 aa15.33■□□□□ 0.04
TRAPPC9-201ENST00000389328 ACEP12821 1306 aa15.33■□□□□ 0.04
TRAPPC9-201ENST00000389328 SOS1Q07889 1333 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC9-201ENST00000389328 PIK3R4Q99570 1358 aa15.33■□□□□ 0.04
TRAPPC9-201ENST00000389328 CEP170Q5SW79 1584 aa15.33■□□□□ 0.04
TRAPPC9-201ENST00000389328 PRDM15P57071 1507 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC9-201ENST00000389328 ZFP91Q96JP5 570 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC9-201ENST00000389328 SLU7O95391 586 aaKnown RBP15.33■□□□□ 0.04
TRAPPC9-201ENST00000389328 ESCO1Q5FWF5 840 aa15.33■□□□□ 0.04
TRAPPC9-201ENST00000389328 ERCC4Q92889 916 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC9-201ENST00000389328 CCDC85AQ96PX6 553 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC9-201ENST00000389328 EIF4G3O43432 1585 aaKnown RBP15.32■□□□□ 0.04
TRAPPC9-201ENST00000389328 IBTKQ9P2D0 1353 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC9-201ENST00000389328 TTC39AQ5SRH9 613 aa15.32■□□□□ 0.04
TRAPPC9-201ENST00000389328 ZSCAN12O43309 604 aa15.32■□□□□ 0.04
TRAPPC9-201ENST00000389328 ERLIN1O75477 346 aa15.32■□□□□ 0.04
TRAPPC9-201ENST00000389328 PDE4CQ08493 712 aa15.32■□□□□ 0.04
TRAPPC9-201ENST00000389328 NMIQ13287 307 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC9-201ENST00000389328 CCDC158Q5M9N0 1113 aa15.32■□□□□ 0.04
TRAPPC9-201ENST00000389328 VPS53Q5VIR6 699 aa15.32■□□□□ 0.04
TRAPPC9-201ENST00000389328 CREB3L3Q68CJ9 461 aa15.32■□□□□ 0.04
TRAPPC9-201ENST00000389328 DBF4Q9UBU7 674 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC9-201ENST00000389328 U3KPZ7 1027 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC9-201ENST00000389328 HSP90AA4PQ58FG1 418 aa15.32■□□□□ 0.04
TRAPPC9-201ENST00000389328 SMARCE1Q969G3 411 aa15.32■□□□□ 0.04
TRAPPC9-201ENST00000389328 PHAXQ9H814 394 aaKnown RBP15.32■□□□□ 0.04
TRAPPC9-201ENST00000389328 CD109Q6YHK3 1445 aa15.32■□□□□ 0.04
TRAPPC9-201ENST00000389328 RIMS2Q9UQ26 1411 aa15.32■□□□□ 0.04
TRAPPC9-201ENST00000389328 NAP1L1P55209 391 aaKnown RBP15.31■□□□□ 0.04
TRAPPC9-201ENST00000389328 ZNF518AQ6AHZ1 1483 aa15.31■□□□□ 0.04
TRAPPC9-201ENST00000389328 CHL1O00533 1208 aa15.31■□□□□ 0.04
TRAPPC9-201ENST00000389328 LRMPQ12912 555 aa15.31■□□□□ 0.04
TRAPPC9-201ENST00000389328 ZNF397Q8NF99 534 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC9-201ENST00000389328 CBX8Q9HC52 389 aa15.31■□□□□ 0.04
TRAPPC9-201ENST00000389328 SGSM2O43147 1006 aa15.31■□□□□ 0.04
TRAPPC9-201ENST00000389328 KIF20AO95235 890 aa15.31■□□□□ 0.04
TRAPPC9-201ENST00000389328 MYD88Q99836 296 aa15.31■□□□□ 0.04
TRAPPC9-201ENST00000389328 ZSCAN16Q9H4T2 348 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC9-201ENST00000389328 TTC21BQ7Z4L5 1316 aa15.31■□□□□ 0.04
TRAPPC9-201ENST00000389328 EIF3JO75822 258 aaKnown RBP15.31■□□□□ 0.04
TRAPPC9-201ENST00000389328 CASQ1P31415 396 aa15.31■□□□□ 0.04
TRAPPC9-201ENST00000389328 LARP1Q6PKG0 1096 aaKnown RBP15.31■□□□□ 0.04
TRAPPC9-201ENST00000389328 RUFY3Q7L099 469 aa15.31■□□□□ 0.04
TRAPPC9-201ENST00000389328 PYCARDQ9ULZ3 195 aa15.3■□□□□ 0.04
TRAPPC9-201ENST00000389328 H0YHG0 523 aa15.3■□□□□ 0.04
TRAPPC9-201ENST00000389328 ARHGAP29Q52LW3 1261 aa15.3■□□□□ 0.04
TRAPPC9-201ENST00000389328 KLHL10Q6JEL2 608 aa15.3■□□□□ 0.04
TRAPPC9-201ENST00000389328 DDX46Q7L014 1031 aaKnown RBP15.3■□□□□ 0.04
TRAPPC9-201ENST00000389328 CPLX3Q8WVH0 158 aa15.3■□□□□ 0.04
TRAPPC9-201ENST00000389328 GNG11P61952 73 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms