RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 BCL9LQ86UU0 1499 aa26.59■■□□□ 1.85
GMDS-202ENST00000380815 OTUD7AQ8TE49 926 aaPredicted RBP26.59■■□□□ 1.85
GMDS-202ENST00000380815 C8orf37Q96NL8 207 aa26.59■■□□□ 1.85
GMDS-202ENST00000380815 VPS72Q15906 364 aa26.58■■□□□ 1.85
GMDS-202ENST00000380815 TTC22Q5TAA0 569 aa26.58■■□□□ 1.85
GMDS-202ENST00000380815 DDRGK1Q96HY6 314 aa26.58■■□□□ 1.85
GMDS-202ENST00000380815 PRIM1P49642 420 aaKnown RBP26.58■■□□□ 1.85
GMDS-202ENST00000380815 FNBP4Q8N3X1 1017 aaPredicted RBP26.58■■□□□ 1.85
GMDS-202ENST00000380815 OSBPL3Q9H4L5 887 aa26.58■■□□□ 1.85
GMDS-202ENST00000380815 DOT1LQ8TEK3 1739 aa26.57■■□□□ 1.84
GMDS-202ENST00000380815 STARD3NLO95772 234 aa26.57■■□□□ 1.84
GMDS-202ENST00000380815 MARCH10Q8NA82 808 aaPredicted RBP26.57■■□□□ 1.84
GMDS-202ENST00000380815 SYTL4Q96C24 671 aaPredicted RBP26.57■■□□□ 1.84
GMDS-202ENST00000380815 SURF6O75683 361 aaKnown RBP26.56■■□□□ 1.84
GMDS-202ENST00000380815 GSPT1P15170 499 aaKnown RBP26.56■■□□□ 1.84
GMDS-202ENST00000380815 HSP90AB4PQ58FF6 505 aa26.56■■□□□ 1.84
GMDS-202ENST00000380815 DNAJC10Q8IXB1 793 aa26.56■■□□□ 1.84
GMDS-202ENST00000380815 KAZALD1Q96I82 304 aa26.56■■□□□ 1.84
GMDS-202ENST00000380815 SUCLG2Q96I99 432 aa26.56■■□□□ 1.84
GMDS-202ENST00000380815 RBM42Q9BTD8 480 aaKnown RBP26.56■■□□□ 1.84
GMDS-202ENST00000380815 NOP58Q9Y2X3 529 aaKnown RBP26.56■■□□□ 1.84
GMDS-202ENST00000380815 TTLL7Q6ZT98 887 aa26.55■■□□□ 1.84
GMDS-202ENST00000380815 SALL3Q9BXA9 1300 aa26.54■■□□□ 1.84
GMDS-202ENST00000380815 BCL11AQ9H165 835 aa26.54■■□□□ 1.84
GMDS-202ENST00000380815 NUP188Q5SRE5 1749 aa26.54■■□□□ 1.84
GMDS-202ENST00000380815 COL15A1P39059 1388 aa26.53■■□□□ 1.84
GMDS-202ENST00000380815 PDE1AP54750 535 aa26.53■■□□□ 1.84
GMDS-202ENST00000380815 TBC1D32Q96NH3 1257 aa26.53■■□□□ 1.84
GMDS-202ENST00000380815 BICC1Q9H694 974 aaKnown RBP26.53■■□□□ 1.84
GMDS-202ENST00000380815 KAT6BQ8WYB5 2073 aa26.52■■□□□ 1.84
GMDS-202ENST00000380815 KIF1BPQ96EK5 621 aa26.52■■□□□ 1.84
GMDS-202ENST00000380815 AFDNP55196 1824 aaKnown RBP26.52■■□□□ 1.84
GMDS-202ENST00000380815 RHPN1Q8TCX5 695 aa26.51■■□□□ 1.83
GMDS-202ENST00000380815 SLC4A9Q96Q91 983 aa26.51■■□□□ 1.83
GMDS-202ENST00000380815 ATP5J2-PTCD1G3V325 749 aa26.51■■□□□ 1.83
GMDS-202ENST00000380815 CDC45O75419 566 aa26.5■■□□□ 1.83
GMDS-202ENST00000380815 FAM98CQ17RN3 349 aaKnown RBP26.5■■□□□ 1.83
GMDS-202ENST00000380815 CYP19A1P11511 503 aaPredicted RBP26.49■■□□□ 1.83
GMDS-202ENST00000380815 MX1P20591 662 aa26.49■■□□□ 1.83
GMDS-202ENST00000380815 TBC1D9Q6ZT07 1266 aa26.49■■□□□ 1.83
GMDS-202ENST00000380815 STAP2Q9UGK3 403 aa26.49■■□□□ 1.83
GMDS-202ENST00000380815 MFAP1P55081 439 aaKnown RBP26.48■■□□□ 1.83
GMDS-202ENST00000380815 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.48■■□□□ 1.83
GMDS-202ENST00000380815 A0A087WZG4 1122 aa26.48■■□□□ 1.83
GMDS-202ENST00000380815 ZBTB3Q9H5J0 574 aa26.48■■□□□ 1.83
GMDS-202ENST00000380815 USP21Q9UK80 565 aa26.48■■□□□ 1.83
GMDS-202ENST00000380815 UBE3BQ7Z3V4 1068 aa26.47■■□□□ 1.83
GMDS-202ENST00000380815 CCDC191Q8NCU4 936 aa26.47■■□□□ 1.83
GMDS-202ENST00000380815 CWC25Q9NXE8 425 aaPredicted RBP26.47■■□□□ 1.83
GMDS-202ENST00000380815 EIF5BO60841 1220 aaKnown RBP26.46■■□□□ 1.83
GMDS-202ENST00000380815 CASP7P55210 303 aa26.46■■□□□ 1.83
GMDS-202ENST00000380815 ERC1Q8IUD2 1116 aa26.46■■□□□ 1.83
GMDS-202ENST00000380815 AOX1Q06278 1338 aa26.46■■□□□ 1.83
GMDS-202ENST00000380815 H7C1W4 665 aa26.46■■□□□ 1.83
GMDS-202ENST00000380815 SDSP20132 328 aa26.46■■□□□ 1.83
GMDS-202ENST00000380815 ACSBG1Q96GR2 724 aa26.46■■□□□ 1.83
GMDS-202ENST00000380815 IL1RAPL2Q9NP60 686 aa26.46■■□□□ 1.83
GMDS-202ENST00000380815 TJP1Q07157 1748 aa26.45■■□□□ 1.82
GMDS-202ENST00000380815 OS9Q13438 667 aaPredicted RBP26.45■■□□□ 1.82
GMDS-202ENST00000380815 RABL6Q3YEC7 729 aaPredicted RBP26.45■■□□□ 1.82
GMDS-202ENST00000380815 EPHA10Q5JZY3 1008 aa26.45■■□□□ 1.82
GMDS-202ENST00000380815 KIF6Q6ZMV9 814 aa26.45■■□□□ 1.82
GMDS-202ENST00000380815 C22orf23Q9BZE7 217 aa26.45■■□□□ 1.82
GMDS-202ENST00000380815 HSPA1LP34931 641 aa26.44■■□□□ 1.82
GMDS-202ENST00000380815 TCIRG1Q13488 830 aa26.43■■□□□ 1.82
GMDS-202ENST00000380815 ISCA1Q9BUE6 129 aa26.43■■□□□ 1.82
GMDS-202ENST00000380815 PA2G4Q9UQ80 394 aaKnown RBP26.43■■□□□ 1.82
GMDS-202ENST00000380815 ZNF330Q9Y3S2 320 aaPredicted RBP26.43■■□□□ 1.82
GMDS-202ENST00000380815 TRIM28Q13263 835 aaKnown RBP26.42■■□□□ 1.82
GMDS-202ENST00000380815 ERICH6Q7L0X2 663 aa26.41■■□□□ 1.82
GMDS-202ENST00000380815 JARID2Q92833 1246 aaPredicted RBP26.41■■□□□ 1.82
GMDS-202ENST00000380815 ZBTB1Q9Y2K1 713 aa26.41■■□□□ 1.82
GMDS-202ENST00000380815 MAP3K15Q6ZN16 1313 aa26.4■■□□□ 1.82
GMDS-202ENST00000380815 A0A0G2JS52 829 aa26.4■■□□□ 1.82
GMDS-202ENST00000380815 IL6STP40189 918 aaPredicted RBP26.4■■□□□ 1.82
GMDS-202ENST00000380815 G3BP1Q13283 466 aaKnown RBP eCLIP26.4■■□□□ 1.823e-7■■■■□ 19.5
GMDS-202ENST00000380815 SMARCC1Q92922 1105 aaPredicted RBP26.4■■□□□ 1.82
GMDS-202ENST00000380815 CICQ96RK0 1608 aaPredicted RBP26.39■■□□□ 1.82
GMDS-202ENST00000380815 MEX3CQ5U5Q3 659 aaKnown RBP26.39■■□□□ 1.82
GMDS-202ENST00000380815 CASC1Q6TDU7 716 aa26.39■■□□□ 1.82
GMDS-202ENST00000380815 NUTM1Q86Y26 1132 aa26.39■■□□□ 1.82
GMDS-202ENST00000380815 CLASRPQ8N2M8 674 aaKnown RBP26.39■■□□□ 1.82
GMDS-202ENST00000380815 COPRSQ9NQ92 184 aa26.39■■□□□ 1.82
GMDS-202ENST00000380815 LOC102724428A0A0B4J2F2 783 aa26.38■■□□□ 1.81
GMDS-202ENST00000380815 RBM25P49756 843 aaKnown RBP26.38■■□□□ 1.81
GMDS-202ENST00000380815 SIK1P57059 783 aa26.38■■□□□ 1.81
GMDS-202ENST00000380815 TSHZ3Q63HK5 1081 aa26.38■■□□□ 1.81
GMDS-202ENST00000380815 GIGYF2Q6Y7W6 1299 aaKnown RBP26.38■■□□□ 1.81
GMDS-202ENST00000380815 TUBGCP6Q96RT7 1819 aa26.38■■□□□ 1.81
GMDS-202ENST00000380815 USP42Q9H9J4 1324 aaKnown RBP26.38■■□□□ 1.81
GMDS-202ENST00000380815 THSD7AQ9UPZ6 1657 aa26.38■■□□□ 1.81
GMDS-202ENST00000380815 PALLDQ8WX93 1383 aa26.37■■□□□ 1.81
GMDS-202ENST00000380815 ATP6V1AP38606 617 aa26.37■■□□□ 1.81
GMDS-202ENST00000380815 RFX5P48382 616 aaPredicted RBP26.37■■□□□ 1.81
GMDS-202ENST00000380815 FOXO4P98177 505 aa26.36■■□□□ 1.81
GMDS-202ENST00000380815 KCNQ2O43526 872 aa26.35■■□□□ 1.81
GMDS-202ENST00000380815 SASH1O94885 1247 aa26.35■■□□□ 1.81
GMDS-202ENST00000380815 HSP90AB3PQ58FF7 597 aa26.35■■□□□ 1.81
GMDS-202ENST00000380815 DAXXQ9UER7 740 aaPredicted RBP26.35■■□□□ 1.81
GMDS-202ENST00000380815 TTC41PQ6P2S7 1318 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms