RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 CCDC141Q6ZP82 1450 aa12.91□□□□□ -0.34
RAD50-201ENST00000378823 CCDC194A0A1B0GVG4 234 aa12.91□□□□□ -0.34
RAD50-201ENST00000378823 FERMT2Q96AC1 680 aa12.91□□□□□ -0.34
RAD50-201ENST00000378823 TNPO1Q92973 898 aaKnown RBP12.91□□□□□ -0.34
RAD50-201ENST00000378823 CEP135Q66GS9 1140 aa12.91□□□□□ -0.34
RAD50-201ENST00000378823 CEP112Q8N8E3 955 aa12.9□□□□□ -0.34
RAD50-201ENST00000378823 DDX12PQ92771 950 aa12.9□□□□□ -0.34
RAD50-201ENST00000378823 IBSPP21815 317 aaPredicted RBP12.9□□□□□ -0.34
RAD50-201ENST00000378823 CCDC82Q8N4S0 544 aa12.9□□□□□ -0.34
RAD50-201ENST00000378823 ZPR1O75312 459 aa12.9□□□□□ -0.34
RAD50-201ENST00000378823 NLRP5P59047 1200 aa12.9□□□□□ -0.34
RAD50-201ENST00000378823 CCDC12Q8WUD4 166 aaPredicted RBP12.9□□□□□ -0.34
RAD50-201ENST00000378823 TTC21AQ8NDW8 1320 aa12.9□□□□□ -0.34
RAD50-201ENST00000378823 DAPK1P53355 1430 aa12.9□□□□□ -0.34
RAD50-201ENST00000378823 LMAN1P49257 510 aa12.9□□□□□ -0.34
RAD50-201ENST00000378823 GPATCH11Q8N954 259 aa12.9□□□□□ -0.34
RAD50-201ENST00000378823 PLVAPQ9BX97 442 aa12.9□□□□□ -0.34
RAD50-201ENST00000378823 GTF2F1P35269 517 aaKnown RBP eCLIP12.9□□□□□ -0.34
RAD50-201ENST00000378823 CPLX3Q8WVH0 158 aa12.9□□□□□ -0.34
RAD50-201ENST00000378823 IFIT3O14879 490 aaKnown RBP12.9□□□□□ -0.35
RAD50-201ENST00000378823 STX6O43752 255 aa12.9□□□□□ -0.35
RAD50-201ENST00000378823 HSF2BPO75031 334 aa12.9□□□□□ -0.35
RAD50-201ENST00000378823 KIF5BP33176 963 aa12.9□□□□□ -0.35
RAD50-201ENST00000378823 MAATS1Q7Z4T9 603 aa12.9□□□□□ -0.35
RAD50-201ENST00000378823 SLF2Q8IX21 1173 aa12.9□□□□□ -0.35
RAD50-201ENST00000378823 SMARCA5O60264 1052 aaPredicted RBP12.89□□□□□ -0.35
RAD50-201ENST00000378823 BAG4O95429 457 aaKnown RBP12.89□□□□□ -0.35
RAD50-201ENST00000378823 FERP16591 822 aa12.89□□□□□ -0.35
RAD50-201ENST00000378823 ZNF165P49910 485 aa12.89□□□□□ -0.35
RAD50-201ENST00000378823 STXBP4Q6ZWJ1 553 aa12.89□□□□□ -0.35
RAD50-201ENST00000378823 TMX1Q9H3N1 280 aa12.89□□□□□ -0.35
RAD50-201ENST00000378823 COMMD10Q9Y6G5 202 aa12.89□□□□□ -0.35
RAD50-201ENST00000378823 ABCC11Q96J66 1382 aa12.89□□□□□ -0.35
RAD50-201ENST00000378823 SREK1Q8WXA9 508 aaKnown RBP12.89□□□□□ -0.35
RAD50-201ENST00000378823 CCT2P78371 535 aaKnown RBP12.89□□□□□ -0.35
RAD50-201ENST00000378823 MIS18AQ9NYP9 233 aa12.89□□□□□ -0.35
RAD50-201ENST00000378823 BMS1Q14692 1282 aaKnown RBP12.89□□□□□ -0.35
RAD50-201ENST00000378823 CCDC96Q2M329 555 aa12.89□□□□□ -0.35
RAD50-201ENST00000378823 PTPRCP08575 1304 aa12.89□□□□□ -0.35
RAD50-201ENST00000378823 GRIN2BQ13224 1484 aa12.89□□□□□ -0.35
RAD50-201ENST00000378823 IPO4Q8TEX9 1081 aaKnown RBP12.89□□□□□ -0.35
RAD50-201ENST00000378823 PRIMPOLQ96LW4 560 aa12.89□□□□□ -0.35
RAD50-201ENST00000378823 SYNJ1O43426 1573 aa12.89□□□□□ -0.35
RAD50-201ENST00000378823 ARFGAP3Q9NP61 516 aa12.89□□□□□ -0.35
RAD50-201ENST00000378823 EVI5LQ96CN4 794 aa12.88□□□□□ -0.35
RAD50-201ENST00000378823 SLC5A1P13866 664 aa12.88□□□□□ -0.35
RAD50-201ENST00000378823 CCDC172P0C7W6 258 aa12.88□□□□□ -0.35
RAD50-201ENST00000378823 TAF7Q15545 349 aaPredicted RBP12.88□□□□□ -0.35
RAD50-201ENST00000378823 TCERG1LQ5VWI1 586 aa12.88□□□□□ -0.35
RAD50-201ENST00000378823 SYCP3Q8IZU3 236 aa12.88□□□□□ -0.35
RAD50-201ENST00000378823 ANKS4BQ8N8V4 417 aa12.88□□□□□ -0.35
RAD50-201ENST00000378823 KCNH5Q8NCM2 988 aa12.88□□□□□ -0.35
RAD50-201ENST00000378823 SSH1Q8WYL5 1049 aa12.88□□□□□ -0.35
RAD50-201ENST00000378823 A0A1W2PRG0 241 aa12.88□□□□□ -0.35
RAD50-201ENST00000378823 HYPKQ9NX55 129 aa12.88□□□□□ -0.35
RAD50-201ENST00000378823 TOP2BQ02880 1626 aa12.88□□□□□ -0.35
RAD50-201ENST00000378823 MNAT1P51948 309 aa12.88□□□□□ -0.35
RAD50-201ENST00000378823 PPP1R14CQ8TAE6 165 aa12.88□□□□□ -0.35
RAD50-201ENST00000378823 TIGD1Q96MW7 591 aa12.88□□□□□ -0.35
RAD50-201ENST00000378823 TSNARE1Q96NA8 513 aa12.88□□□□□ -0.35
RAD50-201ENST00000378823 ARAP1Q96P48 1450 aa12.87□□□□□ -0.35
RAD50-201ENST00000378823 BIN1O00499 593 aa12.87□□□□□ -0.35
RAD50-201ENST00000378823 CUL7Q14999 1698 aa12.87□□□□□ -0.35
RAD50-201ENST00000378823 RARSP54136 660 aaKnown RBP12.87□□□□□ -0.35
RAD50-201ENST00000378823 CCDC155Q8N6L0 562 aa12.87□□□□□ -0.35
RAD50-201ENST00000378823 ZSCAN16Q9H4T2 348 aaPredicted RBP12.87□□□□□ -0.35
RAD50-201ENST00000378823 CCDC171Q6TFL3 1326 aa12.87□□□□□ -0.35
RAD50-201ENST00000378823 ACTN2P35609 894 aa12.87□□□□□ -0.35
RAD50-201ENST00000378823 BICDL1Q6ZP65 573 aa12.87□□□□□ -0.35
RAD50-201ENST00000378823 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
RAD50-201ENST00000378823 GJB2P29033 226 aa12.87□□□□□ -0.35
RAD50-201ENST00000378823 UBA7P41226 1012 aa12.87□□□□□ -0.35
RAD50-201ENST00000378823 CKAP4Q07065 602 aaKnown RBP12.87□□□□□ -0.35
RAD50-201ENST00000378823 MCM10Q7L590 875 aa12.87□□□□□ -0.35
RAD50-201ENST00000378823 DHX29Q7Z478 1369 aaKnown RBP12.87□□□□□ -0.35
RAD50-201ENST00000378823 KIAA0753Q2KHM9 967 aa12.87□□□□□ -0.35
RAD50-201ENST00000378823 CCDC61Q9Y6R9 512 aa12.87□□□□□ -0.35
RAD50-201ENST00000378823 HSPA4P34932 840 aa12.87□□□□□ -0.35
RAD50-201ENST00000378823 DDX23Q9BUQ8 820 aaKnown RBP12.87□□□□□ -0.35
RAD50-201ENST00000378823 SSFA2P28290 1259 aa12.86□□□□□ -0.35
RAD50-201ENST00000378823 DRC1Q96MC2 740 aa12.86□□□□□ -0.35
RAD50-201ENST00000378823 TTF1Q15361 905 aaPredicted RBP12.86□□□□□ -0.35
RAD50-201ENST00000378823 CCDC40Q4G0X9 1142 aa12.86□□□□□ -0.35
RAD50-201ENST00000378823 TBC1D5Q92609 795 aa12.86□□□□□ -0.35
RAD50-201ENST00000378823 PPM1FP49593 454 aaPredicted RBP12.86□□□□□ -0.35
RAD50-201ENST00000378823 RPGRIP1LQ68CZ1 1315 aa12.86□□□□□ -0.35
RAD50-201ENST00000378823 IVLP07476 585 aa12.86□□□□□ -0.35
RAD50-201ENST00000378823 CFAP57Q96MR6 1250 aa12.86□□□□□ -0.35
RAD50-201ENST00000378823 GNG11P61952 73 aa12.86□□□□□ -0.35
RAD50-201ENST00000378823 TMOD3Q9NYL9 352 aa12.86□□□□□ -0.35
RAD50-201ENST00000378823 SPDYE4A6NLX3 237 aa12.86□□□□□ -0.35
RAD50-201ENST00000378823 GOLIM4O00461 696 aa12.86□□□□□ -0.35
RAD50-201ENST00000378823 CHMP4BP1P59074 171 aa12.86□□□□□ -0.35
RAD50-201ENST00000378823 AMOTQ4VCS5 1084 aa12.86□□□□□ -0.35
RAD50-201ENST00000378823 CTAGE1Q96RT6 745 aa12.86□□□□□ -0.35
RAD50-201ENST00000378823 SELENOOQ9BVL4 669 aa12.86□□□□□ -0.35
RAD50-201ENST00000378823 PTCD1O75127 700 aaKnown RBP12.85□□□□□ -0.35
RAD50-201ENST00000378823 ITSN2Q9NZM3 1697 aa12.85□□□□□ -0.35
RAD50-201ENST00000378823 NUTM2BA6NNL0 878 aaPredicted RBP12.85□□□□□ -0.35
RAD50-201ENST00000378823 NUTM2EB1AL46 878 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms