RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 DNAJC10Q8IXB1 793 aa21.56■■□□□ 1.04
THUMPD2-201ENST00000378727 ZBTB47Q9UFB7 747 aaPredicted RBP21.56■■□□□ 1.04
THUMPD2-201ENST00000378727 AFDNP55196 1824 aaKnown RBP21.56■■□□□ 1.04
THUMPD2-201ENST00000378727 MSH5O43196 834 aa21.56■■□□□ 1.04
THUMPD2-201ENST00000378727 TTLL7Q6ZT98 887 aa21.56■■□□□ 1.04
THUMPD2-201ENST00000378727 SLC4A9Q96Q91 983 aa21.56■■□□□ 1.04
THUMPD2-201ENST00000378727 RBM42Q9BTD8 480 aaKnown RBP21.56■■□□□ 1.04
THUMPD2-201ENST00000378727 MTX1Q13505 466 aa21.55■■□□□ 1.04
THUMPD2-201ENST00000378727 GCKRQ14397 625 aa21.55■■□□□ 1.04
THUMPD2-201ENST00000378727 KAZALD1Q96I82 304 aa21.55■■□□□ 1.04
THUMPD2-201ENST00000378727 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.55■■□□□ 1.04
THUMPD2-201ENST00000378727 SRGAP3O43295 1099 aa21.54■■□□□ 1.04
THUMPD2-201ENST00000378727 HSPA1LP34931 641 aa21.54■■□□□ 1.04
THUMPD2-201ENST00000378727 TEX13AQ9BXU3 409 aaPredicted RBP21.54■■□□□ 1.04
THUMPD2-201ENST00000378727 BCL11AQ9H165 835 aa21.54■■□□□ 1.04
THUMPD2-201ENST00000378727 FAM98CQ17RN3 349 aaKnown RBP21.54■■□□□ 1.04
THUMPD2-201ENST00000378727 SUCLG2Q96I99 432 aa21.54■■□□□ 1.04
THUMPD2-201ENST00000378727 TJP1Q07157 1748 aa21.52■■□□□ 1.04
THUMPD2-201ENST00000378727 LRRCC1Q9C099 1032 aa21.52■■□□□ 1.04
THUMPD2-201ENST00000378727 HDAC5Q9UQL6 1122 aa21.52■■□□□ 1.04
THUMPD2-201ENST00000378727 GSPT1P15170 499 aaKnown RBP21.51■■□□□ 1.03
THUMPD2-201ENST00000378727 ACSBG1Q96GR2 724 aa21.51■■□□□ 1.03
THUMPD2-201ENST00000378727 IPO9Q96P70 1041 aaKnown RBP21.51■■□□□ 1.03
THUMPD2-201ENST00000378727 ATP5J2-PTCD1G3V325 749 aa21.51■■□□□ 1.03
THUMPD2-201ENST00000378727 USP21Q9UK80 565 aa21.51■■□□□ 1.03
THUMPD2-201ENST00000378727 STARD3NLO95772 234 aa21.5■■□□□ 1.03
THUMPD2-201ENST00000378727 SURF6O75683 361 aaKnown RBP21.49■■□□□ 1.03
THUMPD2-201ENST00000378727 TTC22Q5TAA0 569 aa21.49■■□□□ 1.03
THUMPD2-201ENST00000378727 BICC1Q9H694 974 aaKnown RBP21.49■■□□□ 1.03
THUMPD2-201ENST00000378727 CYP19A1P11511 503 aaPredicted RBP21.49■■□□□ 1.03
THUMPD2-201ENST00000378727 SALL3Q9BXA9 1300 aa21.49■■□□□ 1.03
THUMPD2-201ENST00000378727 ZBTB3Q9H5J0 574 aa21.48■■□□□ 1.03
THUMPD2-201ENST00000378727 RAB11FIP3O75154 756 aa21.47■■□□□ 1.03
THUMPD2-201ENST00000378727 JARID2Q92833 1246 aaPredicted RBP21.47■■□□□ 1.03
THUMPD2-201ENST00000378727 NOP58Q9Y2X3 529 aaKnown RBP21.47■■□□□ 1.03
THUMPD2-201ENST00000378727 EPHA10Q5JZY3 1008 aa21.46■■□□□ 1.03
THUMPD2-201ENST00000378727 OSBPL3Q9H4L5 887 aa21.46■■□□□ 1.03
THUMPD2-201ENST00000378727 THSD7AQ9UPZ6 1657 aa21.46■■□□□ 1.03
THUMPD2-201ENST00000378727 A0A0G2JS52 829 aa21.46■■□□□ 1.03
THUMPD2-201ENST00000378727 PDE1AP54750 535 aa21.46■■□□□ 1.03
THUMPD2-201ENST00000378727 CASP7P55210 303 aa21.46■■□□□ 1.03
THUMPD2-201ENST00000378727 UBE3BQ7Z3V4 1068 aa21.45■■□□□ 1.02
THUMPD2-201ENST00000378727 RHPN1Q8TCX5 695 aa21.45■■□□□ 1.02
THUMPD2-201ENST00000378727 ZNF330Q9Y3S2 320 aaPredicted RBP21.45■■□□□ 1.02
THUMPD2-201ENST00000378727 COL15A1P39059 1388 aa21.45■■□□□ 1.02
THUMPD2-201ENST00000378727 A0A087WZG4 1122 aa21.44■■□□□ 1.02
THUMPD2-201ENST00000378727 IL1RAPL2Q9NP60 686 aa21.44■■□□□ 1.02
THUMPD2-201ENST00000378727 KCNQ2O43526 872 aa21.44■■□□□ 1.02
THUMPD2-201ENST00000378727 PA2G4Q9UQ80 394 aaKnown RBP21.44■■□□□ 1.02
THUMPD2-201ENST00000378727 MEX3CQ5U5Q3 659 aaKnown RBP21.43■■□□□ 1.02
THUMPD2-201ENST00000378727 KIF1BPQ96EK5 621 aa21.43■■□□□ 1.02
THUMPD2-201ENST00000378727 ZBTB1Q9Y2K1 713 aa21.43■■□□□ 1.02
THUMPD2-201ENST00000378727 TUBGCP6Q96RT7 1819 aa21.43■■□□□ 1.02
THUMPD2-201ENST00000378727 H7C1W4 665 aa21.43■■□□□ 1.02
THUMPD2-201ENST00000378727 HSP90AB4PQ58FF6 505 aa21.43■■□□□ 1.02
THUMPD2-201ENST00000378727 CICQ96RK0 1608 aaPredicted RBP21.42■■□□□ 1.02
THUMPD2-201ENST00000378727 TBC1D9Q6ZT07 1266 aa21.42■■□□□ 1.02
THUMPD2-201ENST00000378727 TBC1D32Q96NH3 1257 aa21.42■■□□□ 1.02
THUMPD2-201ENST00000378727 CWC25Q9NXE8 425 aaPredicted RBP21.42■■□□□ 1.02
THUMPD2-201ENST00000378727 MX1P20591 662 aa21.41■■□□□ 1.02
THUMPD2-201ENST00000378727 MFAP1P55081 439 aaKnown RBP21.41■■□□□ 1.02
THUMPD2-201ENST00000378727 TSHZ3Q63HK5 1081 aa21.41■■□□□ 1.02
THUMPD2-201ENST00000378727 ISCA1Q9BUE6 129 aa21.41■■□□□ 1.02
THUMPD2-201ENST00000378727 UPF2Q9HAU5 1272 aaKnown RBP21.41■■□□□ 1.02
THUMPD2-201ENST00000378727 AFF2P51816 1311 aa21.41■■□□□ 1.02
THUMPD2-201ENST00000378727 SDSP20132 328 aa21.41■■□□□ 1.02
THUMPD2-201ENST00000378727 RABL6Q3YEC7 729 aaPredicted RBP21.41■■□□□ 1.02
THUMPD2-201ENST00000378727 CCDC191Q8NCU4 936 aa21.41■■□□□ 1.02
THUMPD2-201ENST00000378727 STAP2Q9UGK3 403 aa21.41■■□□□ 1.02
THUMPD2-201ENST00000378727 LOC102724428A0A0B4J2F2 783 aa21.4■■□□□ 1.02
THUMPD2-201ENST00000378727 CDC45O75419 566 aa21.4■■□□□ 1.02
THUMPD2-201ENST00000378727 SIK1P57059 783 aa21.4■■□□□ 1.02
THUMPD2-201ENST00000378727 TCIRG1Q13488 830 aa21.4■■□□□ 1.02
THUMPD2-201ENST00000378727 KIF6Q6ZMV9 814 aa21.4■■□□□ 1.02
THUMPD2-201ENST00000378727 PALLDQ8WX93 1383 aa21.4■■□□□ 1.02
THUMPD2-201ENST00000378727 MAP3K15Q6ZN16 1313 aa21.4■■□□□ 1.02
THUMPD2-201ENST00000378727 MYT1Q01538 1121 aa21.4■■□□□ 1.02
THUMPD2-201ENST00000378727 ATP6V1AP38606 617 aa21.39■■□□□ 1.01
THUMPD2-201ENST00000378727 GJD4Q96KN9 370 aaPredicted RBP21.39■■□□□ 1.01
THUMPD2-201ENST00000378727 RREB1Q92766 1687 aa21.38■■□□□ 1.01
THUMPD2-201ENST00000378727 OS9Q13438 667 aaPredicted RBP21.38■■□□□ 1.01
THUMPD2-201ENST00000378727 ITPK1Q13572 414 aa21.38■■□□□ 1.01
THUMPD2-201ENST00000378727 NUTM1Q86Y26 1132 aa21.38■■□□□ 1.01
THUMPD2-201ENST00000378727 DDRGK1Q96HY6 314 aa21.38■■□□□ 1.01
THUMPD2-201ENST00000378727 IL6STP40189 918 aaPredicted RBP21.38■■□□□ 1.01
THUMPD2-201ENST00000378727 INTS5Q6P9B9 1019 aaKnown RBP21.38■■□□□ 1.01
THUMPD2-201ENST00000378727 RFX5P48382 616 aaPredicted RBP21.37■■□□□ 1.01
THUMPD2-201ENST00000378727 FOXO4P98177 505 aa21.37■■□□□ 1.01
THUMPD2-201ENST00000378727 TRIM28Q13263 835 aaKnown RBP21.37■■□□□ 1.01
THUMPD2-201ENST00000378727 KLHDC4Q8TBB5 520 aa21.37■■□□□ 1.01
THUMPD2-201ENST00000378727 MYH14Q7Z406 1995 aaKnown RBP21.36■■□□□ 1.01
THUMPD2-201ENST00000378727 HLFQ16534 295 aa21.36■■□□□ 1.01
THUMPD2-201ENST00000378727 RTL5Q5HYW3 569 aaPredicted RBP21.36■■□□□ 1.01
THUMPD2-201ENST00000378727 GIGYF2Q6Y7W6 1299 aaKnown RBP21.36■■□□□ 1.01
THUMPD2-201ENST00000378727 SMARCC1Q92922 1105 aaPredicted RBP21.36■■□□□ 1.01
THUMPD2-201ENST00000378727 ARXQ96QS3 562 aa21.36■■□□□ 1.01
THUMPD2-201ENST00000378727 ATRNO75882 1429 aa21.36■■□□□ 1.01
THUMPD2-201ENST00000378727 SASH1O94885 1247 aa21.36■■□□□ 1.01
THUMPD2-201ENST00000378727 PTF1AQ7RTS3 328 aa21.36■■□□□ 1.01
THUMPD2-201ENST00000378727 ERC1Q8IUD2 1116 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms