RNA–Protein interactions for RNA: ENST00000377768.7

SNX5-202, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-202ENST00000377768 BEND3Q5T5X7 828 aa19.02■□□□□ 0.63
SNX5-202ENST00000377768 FAM13BQ9NYF5 915 aa19.02■□□□□ 0.63
SNX5-202ENST00000377768 NHSL1Q5SYE7 1610 aa19.01■□□□□ 0.63
SNX5-202ENST00000377768 STRN4Q9NRL3 753 aa19.01■□□□□ 0.63
SNX5-202ENST00000377768 NCLP19338 710 aaKnown RBP19■□□□□ 0.63
SNX5-202ENST00000377768 MCM5P33992 734 aa19■□□□□ 0.63
SNX5-202ENST00000377768 ATP8B2P98198 1209 aa19■□□□□ 0.63
SNX5-202ENST00000377768 C5P01031 1676 aa19■□□□□ 0.63
SNX5-202ENST00000377768 NBPF7P0C2Y1 421 aaPredicted RBP19■□□□□ 0.63
SNX5-202ENST00000377768 ZNF496Q96IT1 587 aaPredicted RBP19■□□□□ 0.63
SNX5-202ENST00000377768 MAP3K2Q9Y2U5 619 aa19■□□□□ 0.63
SNX5-202ENST00000377768 TTC22Q5TAA0 569 aa18.99■□□□□ 0.63
SNX5-202ENST00000377768 USP26Q9BXU7 913 aa18.99■□□□□ 0.63
SNX5-202ENST00000377768 PLEKHG2Q9H7P9 1386 aa18.99■□□□□ 0.63
SNX5-202ENST00000377768 CWC22Q9HCG8 908 aaKnown RBP18.99■□□□□ 0.63
SNX5-202ENST00000377768 RBM27Q9P2N5 1060 aaKnown RBP18.99■□□□□ 0.63
SNX5-202ENST00000377768 DYNC1I1O14576 645 aa18.98■□□□□ 0.63
SNX5-202ENST00000377768 AIMP1Q12904 312 aaKnown RBP18.98■□□□□ 0.63
SNX5-202ENST00000377768 CSPP1Q1MSJ5 1256 aa18.98■□□□□ 0.63
SNX5-202ENST00000377768 ZDHHC9Q9Y397 364 aa18.98■□□□□ 0.63
SNX5-202ENST00000377768 MRC1P22897 1456 aa18.98■□□□□ 0.63
SNX5-202ENST00000377768 PARP4Q9UKK3 1724 aaKnown RBP18.98■□□□□ 0.63
SNX5-202ENST00000377768 CABP4P57796 275 aa18.98■□□□□ 0.63
SNX5-202ENST00000377768 LARP1Q6PKG0 1096 aaKnown RBP18.98■□□□□ 0.63
SNX5-202ENST00000377768 TTC5Q8N0Z6 440 aa18.98■□□□□ 0.63
SNX5-202ENST00000377768 DDX21Q9NR30 783 aaKnown RBP eCLIP18.98■□□□□ 0.63
SNX5-202ENST00000377768 HYPKQ9NX55 129 aa18.98■□□□□ 0.63
SNX5-202ENST00000377768 PDIA6Q15084 440 aa18.97■□□□□ 0.63
SNX5-202ENST00000377768 LRSAM1Q6UWE0 723 aa18.97■□□□□ 0.63
SNX5-202ENST00000377768 ZCRB1Q8TBF4 217 aaKnown RBP18.97■□□□□ 0.63
SNX5-202ENST00000377768 PRPF40AO75400 957 aaKnown RBP18.97■□□□□ 0.63
SNX5-202ENST00000377768 EVA1CP58658 441 aa18.97■□□□□ 0.63
SNX5-202ENST00000377768 KSR2Q6VAB6 950 aa18.97■□□□□ 0.63
SNX5-202ENST00000377768 TMEM63CQ9P1W3 806 aa18.97■□□□□ 0.63
SNX5-202ENST00000377768 MYL6BP14649 208 aa18.96■□□□□ 0.63
SNX5-202ENST00000377768 MTERF4Q7Z6M4 381 aaKnown RBP18.96■□□□□ 0.63
SNX5-202ENST00000377768 ZGPATQ8N5A5 531 aaKnown RBP18.96■□□□□ 0.63
SNX5-202ENST00000377768 PCDH11XQ9BZA7 1347 aa18.96■□□□□ 0.63
SNX5-202ENST00000377768 PCDH11YQ9BZA8 1340 aa18.96■□□□□ 0.63
SNX5-202ENST00000377768 PPP1R42Q7Z4L9 355 aa18.95■□□□□ 0.62
SNX5-202ENST00000377768 LRRCC1Q9C099 1032 aa18.95■□□□□ 0.62
SNX5-202ENST00000377768 CWF19L2Q2TBE0 894 aaKnown RBP18.95■□□□□ 0.62
SNX5-202ENST00000377768 CARD10Q9BWT7 1032 aa18.95■□□□□ 0.62
SNX5-202ENST00000377768 CCDC39Q9UFE4 941 aa18.95■□□□□ 0.62
SNX5-202ENST00000377768 IL2RBP14784 551 aa18.94■□□□□ 0.62
SNX5-202ENST00000377768 SASS6Q6UVJ0 657 aa18.94■□□□□ 0.62
SNX5-202ENST00000377768 USP16Q9Y5T5 823 aa18.94■□□□□ 0.62
SNX5-202ENST00000377768 PIP4K2AP48426 406 aaPredicted RBP18.94■□□□□ 0.62
SNX5-202ENST00000377768 SSH3Q8TE77 659 aa18.94■□□□□ 0.62
SNX5-202ENST00000377768 SRGAP3O43295 1099 aa18.93■□□□□ 0.62
SNX5-202ENST00000377768 SNRPA1P09661 255 aaKnown RBP18.93■□□□□ 0.62
SNX5-202ENST00000377768 TSHZ3Q63HK5 1081 aa18.93■□□□□ 0.62
SNX5-202ENST00000377768 DDX54Q8TDD1 881 aaKnown RBP18.93■□□□□ 0.62
SNX5-202ENST00000377768 FMNL2Q96PY5 1086 aa18.93■□□□□ 0.62
SNX5-202ENST00000377768 SYCE3A1L190 88 aa18.93■□□□□ 0.62
SNX5-202ENST00000377768 DDX58O95786 925 aaKnown RBP18.93■□□□□ 0.62
SNX5-202ENST00000377768 SDSP20132 328 aa18.93■□□□□ 0.62
SNX5-202ENST00000377768 SMAP1Q8IYB5 467 aaPredicted RBP18.93■□□□□ 0.62
SNX5-202ENST00000377768 C9orf78Q9NZ63 289 aaPredicted RBP18.93■□□□□ 0.62
SNX5-202ENST00000377768 NSFL1CQ9UNZ2 370 aaKnown RBP18.93■□□□□ 0.62
SNX5-202ENST00000377768 PDE1AP54750 535 aa18.92■□□□□ 0.62
SNX5-202ENST00000377768 TUBGCP6Q96RT7 1819 aa18.91■□□□□ 0.62
SNX5-202ENST00000377768 ST18O60284 1047 aa18.91■□□□□ 0.62
SNX5-202ENST00000377768 SURF6O75683 361 aaKnown RBP18.91■□□□□ 0.62
SNX5-202ENST00000377768 ALDH1L1O75891 902 aa18.91■□□□□ 0.62
SNX5-202ENST00000377768 XAGE3Q8WTP9 111 aa18.91■□□□□ 0.62
SNX5-202ENST00000377768 CHAMP1Q96JM3 812 aa18.91■□□□□ 0.62
SNX5-202ENST00000377768 POLA2Q14181 598 aa18.9■□□□□ 0.62
SNX5-202ENST00000377768 RIC3Q7Z5B4 369 aa18.9■□□□□ 0.62
SNX5-202ENST00000377768 IL1RAPL2Q9NP60 686 aa18.9■□□□□ 0.62
SNX5-202ENST00000377768 BTG4Q9NY30 223 aa18.9■□□□□ 0.62
SNX5-202ENST00000377768 ROBO1Q9Y6N7 1651 aa18.9■□□□□ 0.62
SNX5-202ENST00000377768 COPS6Q7L5N1 327 aa18.9■□□□□ 0.62
SNX5-202ENST00000377768 SHANK3Q9BYB0 1731 aa18.89■□□□□ 0.62
SNX5-202ENST00000377768 LINS1Q8NG48 757 aa18.89■□□□□ 0.61
SNX5-202ENST00000377768 OSBPL3Q9H4L5 887 aa18.89■□□□□ 0.61
SNX5-202ENST00000377768 SALL3Q9BXA9 1300 aa18.89■□□□□ 0.61
SNX5-202ENST00000377768 MX1P20591 662 aa18.88■□□□□ 0.61
SNX5-202ENST00000377768 GLI3P10071 1580 aa18.88■□□□□ 0.61
SNX5-202ENST00000377768 MBD3O95983 291 aa18.88■□□□□ 0.61
SNX5-202ENST00000377768 IGKV5-2P06315 115 aa18.87■□□□□ 0.61
SNX5-202ENST00000377768 LRP10Q7Z4F1 713 aa18.87■□□□□ 0.61
SNX5-202ENST00000377768 ERVV-2B6SEH9 535 aa18.86■□□□□ 0.61
SNX5-202ENST00000377768 GRM8O00222 908 aa18.86■□□□□ 0.61
SNX5-202ENST00000377768 NKX1-1Q15270 411 aaPredicted RBP18.86■□□□□ 0.61
SNX5-202ENST00000377768 MYD88Q99836 296 aa18.85■□□□□ 0.61
SNX5-202ENST00000377768 PTCD1O75127 700 aaKnown RBP18.85■□□□□ 0.61
SNX5-202ENST00000377768 RAB11FIP3O75154 756 aa18.85■□□□□ 0.61
SNX5-202ENST00000377768 NEXNQ0ZGT2 675 aa18.85■□□□□ 0.61
SNX5-202ENST00000377768 ANKRD13DQ6ZTN6 518 aa18.85■□□□□ 0.61
SNX5-202ENST00000377768 NUTM1Q86Y26 1132 aa18.85■□□□□ 0.61
SNX5-202ENST00000377768 RNF214Q8ND24 703 aa18.85■□□□□ 0.61
SNX5-202ENST00000377768 RHPN1Q8TCX5 695 aa18.85■□□□□ 0.61
SNX5-202ENST00000377768 TCHHQ07283 1943 aa18.84■□□□□ 0.61
SNX5-202ENST00000377768 SUCLG2Q96I99 432 aa18.84■□□□□ 0.61
SNX5-202ENST00000377768 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.84■□□□□ 0.614e-6■□□□□ 8.8
SNX5-202ENST00000377768 LAMB4A4D0S4 1761 aa18.84■□□□□ 0.61
SNX5-202ENST00000377768 REC8O95072 547 aa18.84■□□□□ 0.61
SNX5-202ENST00000377768 KIAA2012Q0VF49 1180 aa18.84■□□□□ 0.61
SNX5-202ENST00000377768 MTX1Q13505 466 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms