RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 BABAM1Q9NWV8 329 aa24.51■■□□□ 1.51
CLN5-201ENST00000377453 STX6O43752 255 aa24.51■■□□□ 1.51
CLN5-201ENST00000377453 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.51■■□□□ 1.51
CLN5-201ENST00000377453 KLHDC4Q8TBB5 520 aa24.51■■□□□ 1.51
CLN5-201ENST00000377453 USP25Q9UHP3 1055 aa24.51■■□□□ 1.51
CLN5-201ENST00000377453 LIMCH1Q9UPQ0 1083 aa24.51■■□□□ 1.51
CLN5-201ENST00000377453 SMC3Q9UQE7 1217 aa24.51■■□□□ 1.51
CLN5-201ENST00000377453 TPM2P07951 284 aa24.5■■□□□ 1.51
CLN5-201ENST00000377453 FAM227BQ96M60 508 aa24.5■■□□□ 1.51
CLN5-201ENST00000377453 CCDC8Q9H0W5 538 aaPredicted RBP24.5■■□□□ 1.51
CLN5-201ENST00000377453 SIL1Q9H173 461 aa24.5■■□□□ 1.51
CLN5-201ENST00000377453 TLR7Q9NYK1 1049 aaKnown RBP24.5■■□□□ 1.51
CLN5-201ENST00000377453 AACSQ86V21 672 aa24.5■■□□□ 1.51
CLN5-201ENST00000377453 PXDNQ92626 1479 aa24.5■■□□□ 1.51
CLN5-201ENST00000377453 HCLS1P14317 486 aaPredicted RBP24.49■■□□□ 1.51
CLN5-201ENST00000377453 PSME1Q06323 249 aa24.49■■□□□ 1.51
CLN5-201ENST00000377453 ST3GAL1Q11201 340 aa24.49■■□□□ 1.51
CLN5-201ENST00000377453 HS1BP3Q53T59 392 aa24.49■■□□□ 1.51
CLN5-201ENST00000377453 CLASRPQ8N2M8 674 aaKnown RBP24.49■■□□□ 1.51
CLN5-201ENST00000377453 HYPKQ9NX55 129 aa24.49■■□□□ 1.51
CLN5-201ENST00000377453 RRP9O43818 475 aaKnown RBP24.48■■□□□ 1.51
CLN5-201ENST00000377453 ZNF500O60304 480 aaPredicted RBP24.48■■□□□ 1.51
CLN5-201ENST00000377453 GJB2P29033 226 aa24.48■■□□□ 1.51
CLN5-201ENST00000377453 DNM1Q05193 864 aaKnown RBP24.48■■□□□ 1.51
CLN5-201ENST00000377453 JARID2Q92833 1246 aaPredicted RBP24.48■■□□□ 1.51
CLN5-201ENST00000377453 TAF6LQ9Y6J9 622 aa24.48■■□□□ 1.51
CLN5-201ENST00000377453 GLRX3O76003 335 aaKnown RBP24.48■■□□□ 1.51
CLN5-201ENST00000377453 ANKARQ7Z5J8 1434 aa24.48■■□□□ 1.51
CLN5-201ENST00000377453 IFIT2P09913 472 aaKnown RBP24.48■■□□□ 1.51
CLN5-201ENST00000377453 C17orf53Q8N3J3 647 aaPredicted RBP24.48■■□□□ 1.51
CLN5-201ENST00000377453 SYAP1Q96A49 352 aaPredicted RBP24.48■■□□□ 1.51
CLN5-201ENST00000377453 SUCLG2Q96I99 432 aa24.48■■□□□ 1.51
CLN5-201ENST00000377453 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.48■■□□□ 1.51
CLN5-201ENST00000377453 RGPD2P0DJD1 1756 aa24.47■■□□□ 1.51
CLN5-201ENST00000377453 F13A1P00488 732 aa24.47■■□□□ 1.51
CLN5-201ENST00000377453 PDRG1Q9NUG6 133 aa24.47■■□□□ 1.51
CLN5-201ENST00000377453 RNMTO43148 476 aaKnown RBP24.47■■□□□ 1.51
CLN5-201ENST00000377453 GIMAP6Q6P9H5 292 aa24.47■■□□□ 1.51
CLN5-201ENST00000377453 ARID3AQ99856 593 aa24.47■■□□□ 1.51
CLN5-201ENST00000377453 ECHDC1Q9NTX5 307 aa24.47■■□□□ 1.51
CLN5-201ENST00000377453 CCDC39Q9UFE4 941 aa24.47■■□□□ 1.51
CLN5-201ENST00000377453 CHMP3Q9Y3E7 222 aa24.47■■□□□ 1.51
CLN5-201ENST00000377453 LTN1O94822 1766 aa24.46■■□□□ 1.51
CLN5-201ENST00000377453 VPS37CA5D8V6 355 aaPredicted RBP24.46■■□□□ 1.51
CLN5-201ENST00000377453 FAM173BQ6P4H8 233 aa24.46■■□□□ 1.51
CLN5-201ENST00000377453 PLCB2Q00722 1185 aa24.46■■□□□ 1.51
CLN5-201ENST00000377453 AKAP4Q5JQC9 854 aa24.46■■□□□ 1.51
CLN5-201ENST00000377453 KAZALD1Q96I82 304 aa24.46■■□□□ 1.51
CLN5-201ENST00000377453 PIP4K2AP48426 406 aaPredicted RBP24.45■■□□□ 1.5
CLN5-201ENST00000377453 DBF4Q9UBU7 674 aaPredicted RBP24.45■■□□□ 1.5
CLN5-201ENST00000377453 GIGYF1O75420 1035 aaPredicted RBP24.45■■□□□ 1.5
CLN5-201ENST00000377453 SLC39A6Q13433 755 aa24.45■■□□□ 1.5
CLN5-201ENST00000377453 ME3Q16798 604 aa24.45■■□□□ 1.5
CLN5-201ENST00000377453 EAF2Q96CJ1 260 aaPredicted RBP24.45■■□□□ 1.5
CLN5-201ENST00000377453 EDC3Q96F86 508 aaKnown RBP24.45■■□□□ 1.5
CLN5-201ENST00000377453 BICC1Q9H694 974 aaKnown RBP24.45■■□□□ 1.5
CLN5-201ENST00000377453 CACNA1FO60840 1977 aa24.45■■□□□ 1.5
CLN5-201ENST00000377453 N4BP2Q86UW6 1770 aaPredicted RBP24.44■■□□□ 1.5
CLN5-201ENST00000377453 SASH1O94885 1247 aa24.44■■□□□ 1.5
CLN5-201ENST00000377453 FERMT3Q86UX7 667 aa24.44■■□□□ 1.5
CLN5-201ENST00000377453 BOLA2Q9H3K6 86 aa24.44■■□□□ 1.5
CLN5-201ENST00000377453 NMIQ13287 307 aaPredicted RBP24.44■■□□□ 1.5
CLN5-201ENST00000377453 ORAI2Q96SN7 254 aa24.44■■□□□ 1.5
CLN5-201ENST00000377453 FAM13BQ9NYF5 915 aa24.43■■□□□ 1.5
CLN5-201ENST00000377453 RBM8AQ9Y5S9 174 aaKnown RBP24.43■■□□□ 1.5
CLN5-201ENST00000377453 NDUFB9Q9Y6M9 179 aa24.43■■□□□ 1.5
CLN5-201ENST00000377453 UQCRHLA0A096LP55 91 aa24.43■■□□□ 1.5
CLN5-201ENST00000377453 CHGBP05060 677 aa24.43■■□□□ 1.5
CLN5-201ENST00000377453 UQCRHP07919 91 aa24.43■■□□□ 1.5
CLN5-201ENST00000377453 KCNJ4P48050 445 aa24.43■■□□□ 1.5
CLN5-201ENST00000377453 PLEKHO1Q53GL0 409 aaPredicted RBP24.43■■□□□ 1.5
CLN5-201ENST00000377453 C1orf141Q5JVX7 400 aa24.43■■□□□ 1.5
CLN5-201ENST00000377453 CCDC183Q5T5S1 534 aa24.43■■□□□ 1.5
CLN5-201ENST00000377453 MTMR6Q9Y217 621 aa24.43■■□□□ 1.5
CLN5-201ENST00000377453 TTC41PQ6P2S7 1318 aa24.43■■□□□ 1.5
CLN5-201ENST00000377453 HSP90AB4PQ58FF6 505 aa24.42■■□□□ 1.5
CLN5-201ENST00000377453 TTC12Q9H892 705 aaPredicted RBP24.42■■□□□ 1.5
CLN5-201ENST00000377453 AXIN2Q9Y2T1 843 aa24.42■■□□□ 1.5
CLN5-201ENST00000377453 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.42■■□□□ 1.5
CLN5-201ENST00000377453 KSR2Q6VAB6 950 aa24.42■■□□□ 1.5
CLN5-201ENST00000377453 TPCN1Q9ULQ1 816 aa24.42■■□□□ 1.5
CLN5-201ENST00000377453 USP42Q9H9J4 1324 aaKnown RBP24.42■■□□□ 1.5
CLN5-201ENST00000377453 MYL6BP14649 208 aa24.41■■□□□ 1.5
CLN5-201ENST00000377453 MED1Q15648 1581 aaPredicted RBP24.41■■□□□ 1.5
CLN5-201ENST00000377453 A0A0D9SFI3 127 aa24.41■■□□□ 1.5
CLN5-201ENST00000377453 HOXB7P09629 217 aa24.41■■□□□ 1.5
CLN5-201ENST00000377453 NFAT5O94916 1531 aa24.41■■□□□ 1.5
CLN5-201ENST00000377453 TMEM87AQ8NBN3 555 aa24.4■■□□□ 1.5
CLN5-201ENST00000377453 CYP46A1Q9Y6A2 500 aa24.4■■□□□ 1.5
CLN5-201ENST00000377453 CCDC171Q6TFL3 1326 aa24.4■■□□□ 1.5
CLN5-201ENST00000377453 ADCY5O95622 1261 aa24.4■■□□□ 1.5
CLN5-201ENST00000377453 CREB3L3Q68CJ9 461 aa24.4■■□□□ 1.5
CLN5-201ENST00000377453 VSIG10Q8N0Z9 540 aa24.4■■□□□ 1.5
CLN5-201ENST00000377453 PHF14O94880 888 aa24.39■■□□□ 1.5
CLN5-201ENST00000377453 UBE2HP62256 183 aa24.39■■□□□ 1.5
CLN5-201ENST00000377453 MTX1Q13505 466 aa24.39■■□□□ 1.5
CLN5-201ENST00000377453 ANKRD24Q8TF21 1146 aa24.39■■□□□ 1.5
CLN5-201ENST00000377453 GCP02774 474 aa24.39■■□□□ 1.49
CLN5-201ENST00000377453 NECTIN1Q15223 517 aa24.39■■□□□ 1.49
CLN5-201ENST00000377453 ZSWIM6Q9HCJ5 1215 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms