RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 IL25Q9H293 177 aa14.36□□□□□ -0.11
SF1-204ENST00000377390 IQGAP3Q86VI3 1631 aa14.36□□□□□ -0.11
SF1-204ENST00000377390 SBNO2Q9Y2G9 1366 aa14.35□□□□□ -0.11
SF1-204ENST00000377390 ANKLE2Q86XL3 938 aa14.35□□□□□ -0.11
SF1-204ENST00000377390 FAM177A1Q8N128 213 aaPredicted RBP14.35□□□□□ -0.11
SF1-204ENST00000377390 CCAR2Q8N163 923 aaKnown RBP14.35□□□□□ -0.11
SF1-204ENST00000377390 SIL1Q9H173 461 aa14.35□□□□□ -0.11
SF1-204ENST00000377390 ROBO2Q9HCK4 1378 aa14.35□□□□□ -0.11
SF1-204ENST00000377390 LARGE1O95461 756 aa14.35□□□□□ -0.11
SF1-204ENST00000377390 SNX14Q9Y5W7 946 aa14.35□□□□□ -0.11
SF1-204ENST00000377390 BRPF1P55201 1214 aaPredicted RBP14.35□□□□□ -0.11
SF1-204ENST00000377390 EYA1Q99502 592 aa14.35□□□□□ -0.11
SF1-204ENST00000377390 CALCOCO1Q9P1Z2 691 aa14.35□□□□□ -0.11
SF1-204ENST00000377390 IL13P35225 146 aa14.34□□□□□ -0.11
SF1-204ENST00000377390 CBX8Q9HC52 389 aa14.34□□□□□ -0.11
SF1-204ENST00000377390 TRPM2O94759 1503 aa14.34□□□□□ -0.11
SF1-204ENST00000377390 GNL2Q13823 731 aaKnown RBP14.34□□□□□ -0.11
SF1-204ENST00000377390 ARID5BQ14865 1188 aa14.34□□□□□ -0.11
SF1-204ENST00000377390 RUFY3Q7L099 469 aa14.34□□□□□ -0.11
SF1-204ENST00000377390 ZNF215Q9UL58 517 aaPredicted RBP14.34□□□□□ -0.11
SF1-204ENST00000377390 IQGAP1P46940 1657 aa14.34□□□□□ -0.11
SF1-204ENST00000377390 PTCD1O75127 700 aaKnown RBP14.34□□□□□ -0.11
SF1-204ENST00000377390 ERCC4Q92889 916 aaPredicted RBP14.34□□□□□ -0.11
SF1-204ENST00000377390 TOMM22Q9NS69 142 aa14.34□□□□□ -0.11
SF1-204ENST00000377390 SPTLC3Q9NUV7 552 aa14.34□□□□□ -0.11
SF1-204ENST00000377390 SRCAPQ6ZRS2 3230 aa14.33□□□□□ -0.11
SF1-204ENST00000377390 SMTNL1A8MU46 457 aa14.33□□□□□ -0.12
SF1-204ENST00000377390 KCNQ3O43525 872 aa14.33□□□□□ -0.12
SF1-204ENST00000377390 RAB11FIP3O75154 756 aa14.33□□□□□ -0.12
SF1-204ENST00000377390 ELF2Q15723 593 aa14.33□□□□□ -0.12
SF1-204ENST00000377390 ZNF530Q6P9A1 599 aaPredicted RBP14.33□□□□□ -0.12
SF1-204ENST00000377390 PHF8Q9UPP1 1060 aa14.33□□□□□ -0.12
SF1-204ENST00000377390 USP16Q9Y5T5 823 aa14.33□□□□□ -0.12
SF1-204ENST00000377390 UNC13BO14795 1591 aa14.33□□□□□ -0.12
SF1-204ENST00000377390 SKILP12757 684 aa14.33□□□□□ -0.12
SF1-204ENST00000377390 FLIIQ13045 1269 aa14.33□□□□□ -0.12
SF1-204ENST00000377390 PPP1R42Q7Z4L9 355 aa14.32□□□□□ -0.12
SF1-204ENST00000377390 TTC6Q86TZ1 520 aa14.32□□□□□ -0.12
SF1-204ENST00000377390 C10orf67Q8IYJ2 551 aa14.32□□□□□ -0.12
SF1-204ENST00000377390 RUFY2Q8WXA3 655 aa14.32□□□□□ -0.12
SF1-204ENST00000377390 NOL10Q9BSC4 688 aaKnown RBP14.32□□□□□ -0.12
SF1-204ENST00000377390 LGR6Q9HBX8 967 aa14.32□□□□□ -0.12
SF1-204ENST00000377390 PPRC1Q5VV67 1664 aaKnown RBP14.32□□□□□ -0.12
SF1-204ENST00000377390 IFIT2P09913 472 aaKnown RBP14.32□□□□□ -0.12
SF1-204ENST00000377390 ZNF853P0CG23 659 aa14.32□□□□□ -0.12
SF1-204ENST00000377390 MYOM1P52179 1685 aa14.32□□□□□ -0.12
SF1-204ENST00000377390 KIDINS220Q9ULH0 1771 aa14.32□□□□□ -0.12
SF1-204ENST00000377390 CACTINQ8WUQ7 758 aaKnown RBP14.32□□□□□ -0.12
SF1-204ENST00000377390 PTPRCP08575 1304 aa14.31□□□□□ -0.12
SF1-204ENST00000377390 TERF2Q15554 542 aa14.31□□□□□ -0.12
SF1-204ENST00000377390 HDGFL1Q5TGJ6 251 aa14.31□□□□□ -0.12
SF1-204ENST00000377390 ZSCAN25Q6NSZ9 544 aa14.31□□□□□ -0.12
SF1-204ENST00000377390 CFAP74Q9C0B2 1584 aa14.31□□□□□ -0.12
SF1-204ENST00000377390 ABCC3O15438 1527 aa14.31□□□□□ -0.12
SF1-204ENST00000377390 HTATSF1O43719 755 aaKnown RBP14.31□□□□□ -0.12
SF1-204ENST00000377390 SHROOM2Q13796 1616 aa14.31□□□□□ -0.12
SF1-204ENST00000377390 SMC2O95347 1197 aa14.31□□□□□ -0.12
SF1-204ENST00000377390 ATF3P18847 181 aa14.31□□□□□ -0.12
SF1-204ENST00000377390 HSPA4P34932 840 aa14.31□□□□□ -0.12
SF1-204ENST00000377390 ADCK5Q3MIX3 580 aa14.31□□□□□ -0.12
SF1-204ENST00000377390 CDC37L1Q7L3B6 337 aa14.31□□□□□ -0.12
SF1-204ENST00000377390 SDF4Q9BRK5 362 aa14.31□□□□□ -0.12
SF1-204ENST00000377390 PHAXQ9H814 394 aaKnown RBP14.31□□□□□ -0.12
SF1-204ENST00000377390 CTNNA3Q9UI47 895 aa14.31□□□□□ -0.12
SF1-204ENST00000377390 MTMR6Q9Y217 621 aa14.31□□□□□ -0.12
SF1-204ENST00000377390 GABPB1Q06547 395 aaPredicted RBP14.3□□□□□ -0.12
SF1-204ENST00000377390 PAXBP1Q9Y5B6 917 aa14.3□□□□□ -0.12
SF1-204ENST00000377390 RNF17Q9BXT8 1623 aaKnown RBP14.3□□□□□ -0.12
SF1-204ENST00000377390 NRDCO43847 1150 aa14.3□□□□□ -0.12
SF1-204ENST00000377390 SLFN14P0C7P3 912 aa14.3□□□□□ -0.12
SF1-204ENST00000377390 ATP8B2P98198 1209 aa14.3□□□□□ -0.12
SF1-204ENST00000377390 PTCH1Q13635 1447 aa14.3□□□□□ -0.12
SF1-204ENST00000377390 PRAMEF22A3QJZ6 481 aa14.29□□□□□ -0.12
SF1-204ENST00000377390 CLASRPQ8N2M8 674 aaKnown RBP14.29□□□□□ -0.12
SF1-204ENST00000377390 KIF18AQ8NI77 898 aa14.29□□□□□ -0.12
SF1-204ENST00000377390 APPP05067 770 aa14.29□□□□□ -0.12
SF1-204ENST00000377390 GUCY1B3Q02153 619 aa14.29□□□□□ -0.12
SF1-204ENST00000377390 C1orf141Q5JVX7 400 aa14.29□□□□□ -0.12
SF1-204ENST00000377390 CCDC30Q5VVM6 783 aa14.29□□□□□ -0.12
SF1-204ENST00000377390 NEK11Q8NG66 645 aa14.29□□□□□ -0.12
SF1-204ENST00000377390 RHPN1Q8TCX5 695 aa14.29□□□□□ -0.12
SF1-204ENST00000377390 ABCA6Q8N139 1617 aa14.29□□□□□ -0.12
SF1-204ENST00000377390 ZNF75DP51815 510 aa14.29□□□□□ -0.12
SF1-204ENST00000377390 MRVI1Q9Y6F6 885 aa14.29□□□□□ -0.12
SF1-204ENST00000377390 NUTM2BA6NNL0 878 aaPredicted RBP14.28□□□□□ -0.12
SF1-204ENST00000377390 NUTM2EB1AL46 878 aaPredicted RBP14.28□□□□□ -0.12
SF1-204ENST00000377390 SF3A1Q15459 793 aaKnown RBP14.28□□□□□ -0.12
SF1-204ENST00000377390 SPHKAPQ2M3C7 1700 aa14.28□□□□□ -0.12
SF1-204ENST00000377390 NUTM2AQ8IVF1 878 aaPredicted RBP14.28□□□□□ -0.12
SF1-204ENST00000377390 EFCAB6Q5THR3 1501 aa14.28□□□□□ -0.12
SF1-204ENST00000377390 BLOC1S2Q6QNY1 142 aa14.28□□□□□ -0.12
SF1-204ENST00000377390 GPATCH11Q8N954 259 aa14.28□□□□□ -0.12
SF1-204ENST00000377390 MNS1Q8NEH6 495 aa14.28□□□□□ -0.12
SF1-204ENST00000377390 C9orf78Q9NZ63 289 aaPredicted RBP14.28□□□□□ -0.12
SF1-204ENST00000377390 CHL1O00533 1208 aa14.28□□□□□ -0.12
SF1-204ENST00000377390 SGSM2O43147 1006 aa14.28□□□□□ -0.12
SF1-204ENST00000377390 PDCP20941 246 aa14.28□□□□□ -0.12
SF1-204ENST00000377390 ME3Q16798 604 aa14.28□□□□□ -0.12
SF1-204ENST00000377390 ISM2Q6H9L7 571 aa14.28□□□□□ -0.12
SF1-204ENST00000377390 LRRC2Q9BYS8 371 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms