RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 AOX1Q06278 1338 aa19.59■□□□□ 0.73
TRIM27-202ENST00000377199 LARGE1O95461 756 aa19.59■□□□□ 0.73
TRIM27-202ENST00000377199 LRSAM1Q6UWE0 723 aa19.59■□□□□ 0.73
TRIM27-202ENST00000377199 KSR2Q6VAB6 950 aa19.59■□□□□ 0.73
TRIM27-202ENST00000377199 RIC3Q7Z5B4 369 aa19.59■□□□□ 0.73
TRIM27-202ENST00000377199 CCDC83Q8IWF9 413 aa19.59■□□□□ 0.73
TRIM27-202ENST00000377199 INTS4Q96HW7 963 aaKnown RBP19.59■□□□□ 0.73
TRIM27-202ENST00000377199 PPP1R9BQ96SB3 815 aa19.59■□□□□ 0.73
TRIM27-202ENST00000377199 BICC1Q9H694 974 aaKnown RBP19.59■□□□□ 0.73
TRIM27-202ENST00000377199 PXDNLA1KZ92 1463 aa19.59■□□□□ 0.73
TRIM27-202ENST00000377199 RUFY3Q7L099 469 aa19.59■□□□□ 0.73
TRIM27-202ENST00000377199 TCEANC2Q96MN5 208 aa19.59■□□□□ 0.73
TRIM27-202ENST00000377199 ECHDC1Q9NTX5 307 aa19.59■□□□□ 0.73
TRIM27-202ENST00000377199 TLR7Q9NYK1 1049 aaKnown RBP19.59■□□□□ 0.73
TRIM27-202ENST00000377199 CNPY2Q9Y2B0 182 aa19.59■□□□□ 0.73
TRIM27-202ENST00000377199 AMOTQ4VCS5 1084 aa19.58■□□□□ 0.73
TRIM27-202ENST00000377199 ARHGEF25Q86VW2 580 aa19.58■□□□□ 0.73
TRIM27-202ENST00000377199 BOLA2Q9H3K6 86 aa19.58■□□□□ 0.73
TRIM27-202ENST00000377199 RGPD2P0DJD1 1756 aa19.58■□□□□ 0.72
TRIM27-202ENST00000377199 FIBPO43427 364 aa19.58■□□□□ 0.72
TRIM27-202ENST00000377199 FAM227BQ96M60 508 aa19.58■□□□□ 0.72
TRIM27-202ENST00000377199 MBD3O95983 291 aa19.57■□□□□ 0.72
TRIM27-202ENST00000377199 HOXB7P09629 217 aa19.57■□□□□ 0.72
TRIM27-202ENST00000377199 ZSCAN30Q86W11 494 aa19.57■□□□□ 0.72
TRIM27-202ENST00000377199 SMC3Q9UQE7 1217 aa19.57■□□□□ 0.72
TRIM27-202ENST00000377199 WDR33Q9C0J8 1336 aaKnown RBP19.57■□□□□ 0.72
TRIM27-202ENST00000377199 G3BP1Q13283 466 aaKnown RBP eCLIP19.56■□□□□ 0.72
TRIM27-202ENST00000377199 NECAB1Q8N987 351 aa19.56■□□□□ 0.72
TRIM27-202ENST00000377199 GPATCH3Q96I76 525 aa19.56■□□□□ 0.72
TRIM27-202ENST00000377199 NDUFB9Q9Y6M9 179 aa19.56■□□□□ 0.72
TRIM27-202ENST00000377199 GRM8O00222 908 aa19.56■□□□□ 0.72
TRIM27-202ENST00000377199 CSB-PGBD3P0DP91 1061 aa19.55■□□□□ 0.72
TRIM27-202ENST00000377199 COL9A3Q14050 684 aaPredicted RBP19.55■□□□□ 0.72
TRIM27-202ENST00000377199 KRT28Q7Z3Y7 464 aa19.55■□□□□ 0.72
TRIM27-202ENST00000377199 NFATC2IPQ8NCF5 419 aa19.55■□□□□ 0.72
TRIM27-202ENST00000377199 LIMCH1Q9UPQ0 1083 aa19.55■□□□□ 0.72
TRIM27-202ENST00000377199 CABLES1Q8TDN4 633 aa19.55■□□□□ 0.72
TRIM27-202ENST00000377199 EAF2Q96CJ1 260 aaPredicted RBP19.55■□□□□ 0.72
TRIM27-202ENST00000377199 EDC3Q96F86 508 aaKnown RBP19.55■□□□□ 0.72
TRIM27-202ENST00000377199 VPS37CA5D8V6 355 aaPredicted RBP19.54■□□□□ 0.72
TRIM27-202ENST00000377199 SYT1P21579 422 aa19.54■□□□□ 0.72
TRIM27-202ENST00000377199 NFAT5O94916 1531 aa19.54■□□□□ 0.72
TRIM27-202ENST00000377199 PDRG1Q9NUG6 133 aa19.54■□□□□ 0.72
TRIM27-202ENST00000377199 SASH1O94885 1247 aa19.53■□□□□ 0.72
TRIM27-202ENST00000377199 PROSER2Q86WR7 435 aaPredicted RBP19.53■□□□□ 0.72
TRIM27-202ENST00000377199 RUFY2Q8WXA3 655 aa19.53■□□□□ 0.72
TRIM27-202ENST00000377199 RAPGEF4Q8WZA2 1011 aa19.53■□□□□ 0.72
TRIM27-202ENST00000377199 MYD88Q99836 296 aa19.53■□□□□ 0.72
TRIM27-202ENST00000377199 CHMP3Q9Y3E7 222 aa19.53■□□□□ 0.72
TRIM27-202ENST00000377199 PLCB2Q00722 1185 aa19.53■□□□□ 0.72
TRIM27-202ENST00000377199 KAZALD1Q96I82 304 aa19.53■□□□□ 0.72
TRIM27-202ENST00000377199 TTC14Q96N46 770 aa19.53■□□□□ 0.72
TRIM27-202ENST00000377199 FSD1Q9BTV5 496 aa19.53■□□□□ 0.72
TRIM27-202ENST00000377199 CHMP4AQ9BY43 222 aa19.53■□□□□ 0.72
TRIM27-202ENST00000377199 RPAP1Q9BWH6 1393 aaPredicted RBP19.53■□□□□ 0.72
TRIM27-202ENST00000377199 TTC41PQ6P2S7 1318 aa19.53■□□□□ 0.72
TRIM27-202ENST00000377199 STX6O43752 255 aa19.53■□□□□ 0.72
TRIM27-202ENST00000377199 PTMAP06454 111 aaKnown RBP19.53■□□□□ 0.72
TRIM27-202ENST00000377199 DDX58O95786 925 aaKnown RBP19.52■□□□□ 0.72
TRIM27-202ENST00000377199 GJB2P29033 226 aa19.52■□□□□ 0.72
TRIM27-202ENST00000377199 NMIQ13287 307 aaPredicted RBP19.52■□□□□ 0.72
TRIM27-202ENST00000377199 XAGE3Q8WTP9 111 aa19.52■□□□□ 0.72
TRIM27-202ENST00000377199 TSPY26PQ9H489 355 aa19.52■□□□□ 0.72
TRIM27-202ENST00000377199 HYPKQ9NX55 129 aa19.52■□□□□ 0.72
TRIM27-202ENST00000377199 CACNA1FO60840 1977 aa19.52■□□□□ 0.72
TRIM27-202ENST00000377199 ALDH1L1O75891 902 aa19.52■□□□□ 0.71
TRIM27-202ENST00000377199 CHRNA2Q15822 529 aa19.52■□□□□ 0.71
TRIM27-202ENST00000377199 COPS6Q7L5N1 327 aa19.52■□□□□ 0.71
TRIM27-202ENST00000377199 LINS1Q8NG48 757 aa19.52■□□□□ 0.71
TRIM27-202ENST00000377199 IGKV5-2P06315 115 aa19.51■□□□□ 0.71
TRIM27-202ENST00000377199 ZSCAN22P10073 491 aaPredicted RBP19.51■□□□□ 0.71
TRIM27-202ENST00000377199 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.51■□□□□ 0.71
TRIM27-202ENST00000377199 RBM8AQ9Y5S9 174 aaKnown RBP19.51■□□□□ 0.71
TRIM27-202ENST00000377199 TUBGCP6Q96RT7 1819 aa19.51■□□□□ 0.71
TRIM27-202ENST00000377199 ZNF790Q6PG37 636 aa19.5■□□□□ 0.71
TRIM27-202ENST00000377199 FERMT3Q86UX7 667 aa19.5■□□□□ 0.71
TRIM27-202ENST00000377199 SYAP1Q96A49 352 aaPredicted RBP19.5■□□□□ 0.71
TRIM27-202ENST00000377199 CYP46A1Q9Y6A2 500 aa19.5■□□□□ 0.71
TRIM27-202ENST00000377199 ATP5J2-PTCD1G3V325 749 aa19.5■□□□□ 0.71
TRIM27-202ENST00000377199 PTCD1O75127 700 aaKnown RBP19.5■□□□□ 0.71
TRIM27-202ENST00000377199 DDX21Q9NR30 783 aaKnown RBP eCLIP19.5■□□□□ 0.71
TRIM27-202ENST00000377199 ADGRL3Q9HAR2 1447 aa19.5■□□□□ 0.71
TRIM27-202ENST00000377199 CHGBP05060 677 aa19.5■□□□□ 0.71
TRIM27-202ENST00000377199 ZKSCAN1P17029 563 aaPredicted RBP19.5■□□□□ 0.71
TRIM27-202ENST00000377199 NEXNQ0ZGT2 675 aa19.5■□□□□ 0.71
TRIM27-202ENST00000377199 STK3Q13188 491 aa19.5■□□□□ 0.71
TRIM27-202ENST00000377199 EPHA10Q5JZY3 1008 aa19.5■□□□□ 0.71
TRIM27-202ENST00000377199 ERC1Q8IUD2 1116 aa19.5■□□□□ 0.71
TRIM27-202ENST00000377199 A0A0D9SFI3 127 aa19.49■□□□□ 0.71
TRIM27-202ENST00000377199 EVI5LQ96CN4 794 aa19.49■□□□□ 0.71
TRIM27-202ENST00000377199 TAF6LQ9Y6J9 622 aa19.49■□□□□ 0.71
TRIM27-202ENST00000377199 DNM1Q05193 864 aaKnown RBP19.49■□□□□ 0.71
TRIM27-202ENST00000377199 MTX1Q13505 466 aa19.49■□□□□ 0.71
TRIM27-202ENST00000377199 PDIA6Q15084 440 aa19.48■□□□□ 0.71
TRIM27-202ENST00000377199 ZNF496Q96IT1 587 aaPredicted RBP19.48■□□□□ 0.71
TRIM27-202ENST00000377199 USP16Q9Y5T5 823 aa19.48■□□□□ 0.71
TRIM27-202ENST00000377199 FAM173BQ6P4H8 233 aa19.48■□□□□ 0.71
TRIM27-202ENST00000377199 CCDC171Q6TFL3 1326 aa19.48■□□□□ 0.71
TRIM27-202ENST00000377199 ME3Q16798 604 aa19.47■□□□□ 0.71
TRIM27-202ENST00000377199 CREB3L3Q68CJ9 461 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms