RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 MTX1Q13505 466 aa21.62■■□□□ 1.05
PHF1-201ENST00000374512 C19orf44Q9H6X5 657 aa21.62■■□□□ 1.05
PHF1-201ENST00000374512 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.62■■□□□ 1.05
PHF1-201ENST00000374512 GLRX3O76003 335 aaKnown RBP21.61■■□□□ 1.05
PHF1-201ENST00000374512 RUFY2Q8WXA3 655 aa21.61■■□□□ 1.05
PHF1-201ENST00000374512 IL25Q9H293 177 aa21.61■■□□□ 1.05
PHF1-201ENST00000374512 LIMCH1Q9UPQ0 1083 aa21.61■■□□□ 1.05
PHF1-201ENST00000374512 ATP6V1DQ9Y5K8 247 aa21.61■■□□□ 1.05
PHF1-201ENST00000374512 NOL8Q76FK4 1167 aaKnown RBP21.61■■□□□ 1.05
PHF1-201ENST00000374512 KRT28Q7Z3Y7 464 aa21.61■■□□□ 1.05
PHF1-201ENST00000374512 PI4KAP2A4QPH2 592 aa21.6■■□□□ 1.05
PHF1-201ENST00000374512 KCNQ3O43525 872 aa21.6■■□□□ 1.05
PHF1-201ENST00000374512 C1orf141Q5JVX7 400 aa21.6■■□□□ 1.05
PHF1-201ENST00000374512 USP48Q86UV5 1035 aa21.6■■□□□ 1.05
PHF1-201ENST00000374512 PI4KAP1Q8N8J0 262 aa21.6■■□□□ 1.05
PHF1-201ENST00000374512 OVOS2A0A0G2JMS6 1433 aa21.6■■□□□ 1.05
PHF1-201ENST00000374512 MPRIPQ6WCQ1 1025 aa21.6■■□□□ 1.05
PHF1-201ENST00000374512 RPAP1Q9BWH6 1393 aaPredicted RBP21.59■■□□□ 1.05
PHF1-201ENST00000374512 NBPF7P0C2Y1 421 aaPredicted RBP21.59■■□□□ 1.05
PHF1-201ENST00000374512 RNMTO43148 476 aaKnown RBP21.59■■□□□ 1.05
PHF1-201ENST00000374512 ZSCAN22P10073 491 aaPredicted RBP21.59■■□□□ 1.05
PHF1-201ENST00000374512 LMOD2Q6P5Q4 547 aa21.59■■□□□ 1.05
PHF1-201ENST00000374512 MST1RQ04912 1400 aa21.59■■□□□ 1.05
PHF1-201ENST00000374512 ERC1Q8IUD2 1116 aa21.58■■□□□ 1.05
PHF1-201ENST00000374512 DBF4Q9UBU7 674 aaPredicted RBP21.58■■□□□ 1.05
PHF1-201ENST00000374512 ALDH1L1O75891 902 aa21.57■■□□□ 1.04
PHF1-201ENST00000374512 PDIA4P13667 645 aaKnown RBP21.57■■□□□ 1.04
PHF1-201ENST00000374512 TM6SF1Q9BZW5 370 aa21.57■■□□□ 1.04
PHF1-201ENST00000374512 CAMTA1Q9Y6Y1 1673 aa21.57■■□□□ 1.04
PHF1-201ENST00000374512 CCDC183Q5T5S1 534 aa21.57■■□□□ 1.04
PHF1-201ENST00000374512 CLASRPQ8N2M8 674 aaKnown RBP21.57■■□□□ 1.04
PHF1-201ENST00000374512 GPATCH3Q96I76 525 aa21.57■■□□□ 1.04
PHF1-201ENST00000374512 ADCY9O60503 1353 aa21.57■■□□□ 1.04
PHF1-201ENST00000374512 AK2P54819 239 aa21.56■■□□□ 1.04
PHF1-201ENST00000374512 ANKRD24Q8TF21 1146 aa21.56■■□□□ 1.04
PHF1-201ENST00000374512 ZSCAN31Q96LW9 406 aaPredicted RBP21.56■■□□□ 1.04
PHF1-201ENST00000374512 PXDNQ92626 1479 aa21.56■■□□□ 1.04
PHF1-201ENST00000374512 STX6O43752 255 aa21.56■■□□□ 1.04
PHF1-201ENST00000374512 UBE2HP62256 183 aa21.56■■□□□ 1.04
PHF1-201ENST00000374512 KCNB2Q92953 911 aa21.56■■□□□ 1.04
PHF1-201ENST00000374512 ALS2Q96Q42 1657 aa21.55■■□□□ 1.04
PHF1-201ENST00000374512 GADD45BO75293 160 aaPredicted RBP21.55■■□□□ 1.04
PHF1-201ENST00000374512 PDCL3Q9H2J4 239 aa21.55■■□□□ 1.04
PHF1-201ENST00000374512 SH2B1Q9NRF2 756 aaPredicted RBP21.55■■□□□ 1.04
PHF1-201ENST00000374512 DIAPH3Q9NSV4 1193 aa21.55■■□□□ 1.04
PHF1-201ENST00000374512 MAP4K4O95819 1239 aaPredicted RBP21.55■■□□□ 1.04
PHF1-201ENST00000374512 VPS53Q5VIR6 699 aa21.55■■□□□ 1.04
PHF1-201ENST00000374512 RUFY3Q7L099 469 aa21.55■■□□□ 1.04
PHF1-201ENST00000374512 RNF214Q8ND24 703 aa21.55■■□□□ 1.04
PHF1-201ENST00000374512 SMC3Q9UQE7 1217 aa21.55■■□□□ 1.04
PHF1-201ENST00000374512 ANXA1P04083 346 aa21.54■■□□□ 1.04
PHF1-201ENST00000374512 RASEFQ8IZ41 740 aa21.54■■□□□ 1.04
PHF1-201ENST00000374512 ECHDC1Q9NTX5 307 aa21.54■■□□□ 1.04
PHF1-201ENST00000374512 TCHHQ07283 1943 aa21.54■■□□□ 1.04
PHF1-201ENST00000374512 SYT1P21579 422 aa21.53■■□□□ 1.04
PHF1-201ENST00000374512 OS9Q13438 667 aaPredicted RBP21.53■■□□□ 1.04
PHF1-201ENST00000374512 CWC27Q6UX04 472 aaKnown RBP21.53■■□□□ 1.04
PHF1-201ENST00000374512 GIGYF1O75420 1035 aaPredicted RBP21.53■■□□□ 1.04
PHF1-201ENST00000374512 HEG1Q9ULI3 1381 aa21.53■■□□□ 1.04
PHF1-201ENST00000374512 HIP1O00291 1037 aa21.52■■□□□ 1.04
PHF1-201ENST00000374512 F13A1P00488 732 aa21.52■■□□□ 1.04
PHF1-201ENST00000374512 HYPKQ9NX55 129 aa21.52■■□□□ 1.04
PHF1-201ENST00000374512 SIPA1L3O60292 1781 aaPredicted RBP21.52■■□□□ 1.04
PHF1-201ENST00000374512 RGPD5Q99666 1765 aa21.52■■□□□ 1.04
PHF1-201ENST00000374512 DCCP43146 1447 aa21.52■■□□□ 1.04
PHF1-201ENST00000374512 ATF3P18847 181 aa21.52■■□□□ 1.04
PHF1-201ENST00000374512 EVI5LQ96CN4 794 aa21.52■■□□□ 1.04
PHF1-201ENST00000374512 LMTK3Q96Q04 1460 aa21.51■■□□□ 1.03
PHF1-201ENST00000374512 GDPD2Q9HCC8 539 aa21.51■■□□□ 1.03
PHF1-201ENST00000374512 ZSWIM6Q9HCJ5 1215 aa21.51■■□□□ 1.03
PHF1-201ENST00000374512 PTMAP06454 111 aaKnown RBP21.51■■□□□ 1.03
PHF1-201ENST00000374512 CASTP20810 708 aaKnown RBP21.51■■□□□ 1.03
PHF1-201ENST00000374512 KSR2Q6VAB6 950 aa21.51■■□□□ 1.03
PHF1-201ENST00000374512 MAP7D2Q96T17 732 aa21.51■■□□□ 1.03
PHF1-201ENST00000374512 AXIN2Q9Y2T1 843 aa21.51■■□□□ 1.03
PHF1-201ENST00000374512 MAP3K2Q9Y2U5 619 aa21.51■■□□□ 1.03
PHF1-201ENST00000374512 TMEM94Q12767 1356 aa21.5■■□□□ 1.03
PHF1-201ENST00000374512 R3HCC1Q9Y3T6 440 aaKnown RBP21.5■■□□□ 1.03
PHF1-201ENST00000374512 CYP46A1Q9Y6A2 500 aa21.5■■□□□ 1.03
PHF1-201ENST00000374512 STRCP1A6NGW2 1772 aa21.49■■□□□ 1.03
PHF1-201ENST00000374512 C9orf78Q9NZ63 289 aaPredicted RBP21.49■■□□□ 1.03
PHF1-201ENST00000374512 SPG7Q9UQ90 795 aa21.49■■□□□ 1.03
PHF1-201ENST00000374512 CNPY2Q9Y2B0 182 aa21.49■■□□□ 1.03
PHF1-201ENST00000374512 IFIT2P09913 472 aaKnown RBP21.49■■□□□ 1.03
PHF1-201ENST00000374512 PDRG1Q9NUG6 133 aa21.49■■□□□ 1.03
PHF1-201ENST00000374512 ADAMTS7Q9UKP4 1686 aa21.49■■□□□ 1.03
PHF1-201ENST00000374512 ZKSCAN1P17029 563 aaPredicted RBP21.48■■□□□ 1.03
PHF1-201ENST00000374512 KIAA2012Q0VF49 1180 aa21.48■■□□□ 1.03
PHF1-201ENST00000374512 FOXD4L6Q3SYB3 417 aaPredicted RBP21.48■■□□□ 1.03
PHF1-201ENST00000374512 FOXD4L3Q6VB84 417 aaPredicted RBP21.48■■□□□ 1.03
PHF1-201ENST00000374512 SNRKQ9NRH2 765 aa21.48■■□□□ 1.03
PHF1-201ENST00000374512 ERBB3P21860 1342 aa21.47■■□□□ 1.03
PHF1-201ENST00000374512 PROSER3Q2NL68 480 aa21.47■■□□□ 1.03
PHF1-201ENST00000374512 UTYO14607 1347 aa21.47■■□□□ 1.03
PHF1-201ENST00000374512 NECTIN1Q15223 517 aa21.47■■□□□ 1.03
PHF1-201ENST00000374512 SASS6Q6UVJ0 657 aa21.46■■□□□ 1.03
PHF1-201ENST00000374512 JAKMIP1Q96N16 626 aaKnown RBP21.46■■□□□ 1.03
PHF1-201ENST00000374512 CCDC171Q6TFL3 1326 aa21.46■■□□□ 1.03
PHF1-201ENST00000374512 GJB2P29033 226 aa21.45■■□□□ 1.03
PHF1-201ENST00000374512 DYNC1I1O14576 645 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms