RNA–Protein interactions for RNA: ENST00000373668.7

COL16A1-202, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL16A1, Length 3,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-202ENST00000373668 ANKRD44Q8N8A2 993 aa16.69■□□□□ 0.26
COL16A1-202ENST00000373668 ST18O60284 1047 aa16.69■□□□□ 0.26
COL16A1-202ENST00000373668 CD2BP2O95400 341 aaKnown RBP16.69■□□□□ 0.26
COL16A1-202ENST00000373668 LMBR1LQ6UX01 489 aa16.69■□□□□ 0.26
COL16A1-202ENST00000373668 SNX21Q969T3 373 aa16.69■□□□□ 0.26
COL16A1-202ENST00000373668 SNRKQ9NRH2 765 aa16.69■□□□□ 0.26
COL16A1-202ENST00000373668 MED14O60244 1454 aa16.69■□□□□ 0.26
COL16A1-202ENST00000373668 ERBB4Q15303 1308 aa16.68■□□□□ 0.26
COL16A1-202ENST00000373668 MPNDQ8N594 471 aa16.68■□□□□ 0.26
COL16A1-202ENST00000373668 KCNQ2O43526 872 aa16.68■□□□□ 0.26
COL16A1-202ENST00000373668 BAG4O95429 457 aaKnown RBP16.68■□□□□ 0.26
COL16A1-202ENST00000373668 ZNF594Q96JF6 807 aaPredicted RBP16.68■□□□□ 0.26
COL16A1-202ENST00000373668 DDX21Q9NR30 783 aaKnown RBP eCLIP16.68■□□□□ 0.26
COL16A1-202ENST00000373668 NUCB2P80303 420 aa16.68■□□□□ 0.26
COL16A1-202ENST00000373668 ZSCAN30Q86W11 494 aa16.68■□□□□ 0.26
COL16A1-202ENST00000373668 DIAPH3Q9NSV4 1193 aa16.68■□□□□ 0.26
COL16A1-202ENST00000373668 RBM25P49756 843 aaKnown RBP16.67■□□□□ 0.26
COL16A1-202ENST00000373668 INTS3Q68E01 1043 aaKnown RBP16.67■□□□□ 0.26
COL16A1-202ENST00000373668 BICC1Q9H694 974 aaKnown RBP16.67■□□□□ 0.26
COL16A1-202ENST00000373668 TRMT112Q9UI30 125 aaKnown RBP16.67■□□□□ 0.26
COL16A1-202ENST00000373668 PCDH11XQ9BZA7 1347 aa16.67■□□□□ 0.26
COL16A1-202ENST00000373668 PCDH11YQ9BZA8 1340 aa16.67■□□□□ 0.26
COL16A1-202ENST00000373668 HELBQ8NG08 1087 aaPredicted RBP16.67■□□□□ 0.26
COL16A1-202ENST00000373668 GRM8O00222 908 aa16.66■□□□□ 0.26
COL16A1-202ENST00000373668 TPM2P07951 284 aa16.66■□□□□ 0.26
COL16A1-202ENST00000373668 USP21Q9UK80 565 aa16.66■□□□□ 0.26
COL16A1-202ENST00000373668 SYNE4Q8N205 404 aa16.65■□□□□ 0.26
COL16A1-202ENST00000373668 PIGBQ92521 554 aa16.65■□□□□ 0.26
COL16A1-202ENST00000373668 FKBP4Q02790 459 aaKnown RBP eCLIP16.65■□□□□ 0.26
COL16A1-202ENST00000373668 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.65■□□□□ 0.26
COL16A1-202ENST00000373668 MX1P20591 662 aa16.65■□□□□ 0.26
COL16A1-202ENST00000373668 CNNM1Q9NRU3 951 aa16.65■□□□□ 0.26
COL16A1-202ENST00000373668 RABEP1Q15276 862 aa16.64■□□□□ 0.25
COL16A1-202ENST00000373668 SUCLG2Q96I99 432 aa16.64■□□□□ 0.25
COL16A1-202ENST00000373668 COL3A1P02461 1466 aaPredicted RBP16.64■□□□□ 0.25
COL16A1-202ENST00000373668 MST1RQ04912 1400 aa16.64■□□□□ 0.25
COL16A1-202ENST00000373668 FSD1Q9BTV5 496 aa16.64■□□□□ 0.25
COL16A1-202ENST00000373668 UPF3BQ9BZI7 483 aaKnown RBP16.64■□□□□ 0.25
COL16A1-202ENST00000373668 CHMP4CQ96CF2 233 aa16.64■□□□□ 0.25
COL16A1-202ENST00000373668 RBM27Q9P2N5 1060 aaKnown RBP16.64■□□□□ 0.25
COL16A1-202ENST00000373668 IQSEC3Q9UPP2 1182 aaPredicted RBP16.64■□□□□ 0.25
COL16A1-202ENST00000373668 KDM4AO75164 1064 aa16.63■□□□□ 0.25
COL16A1-202ENST00000373668 SDSP20132 328 aa16.63■□□□□ 0.25
COL16A1-202ENST00000373668 CCDC57Q2TAC2 916 aa16.63■□□□□ 0.25
COL16A1-202ENST00000373668 RHPN1Q8TCX5 695 aa16.63■□□□□ 0.25
COL16A1-202ENST00000373668 GPATCH3Q96I76 525 aa16.63■□□□□ 0.25
COL16A1-202ENST00000373668 CARD10Q9BWT7 1032 aa16.63■□□□□ 0.25
COL16A1-202ENST00000373668 DCTPP1Q9H773 170 aa16.63■□□□□ 0.25
COL16A1-202ENST00000373668 ABCC4O15439 1325 aa16.63■□□□□ 0.25
COL16A1-202ENST00000373668 HCLS1P14317 486 aaPredicted RBP16.62■□□□□ 0.25
COL16A1-202ENST00000373668 ATP8B2P98198 1209 aa16.62■□□□□ 0.25
COL16A1-202ENST00000373668 TNS3Q68CZ2 1445 aa16.62■□□□□ 0.25
COL16A1-202ENST00000373668 KLHL34Q8N239 644 aa16.62■□□□□ 0.25
COL16A1-202ENST00000373668 HDAC5Q9UQL6 1122 aa16.62■□□□□ 0.25
COL16A1-202ENST00000373668 KLHL40Q2TBA0 621 aa16.62■□□□□ 0.25
COL16A1-202ENST00000373668 EDC3Q96F86 508 aaKnown RBP16.62■□□□□ 0.25
COL16A1-202ENST00000373668 PLEKHM2Q8IWE5 1019 aa16.62■□□□□ 0.25
COL16A1-202ENST00000373668 LINS1Q8NG48 757 aa16.62■□□□□ 0.25
COL16A1-202ENST00000373668 TIMM10P62072 90 aa16.61■□□□□ 0.25
COL16A1-202ENST00000373668 PPFIA3O75145 1194 aa16.61■□□□□ 0.25
COL16A1-202ENST00000373668 NEK4P51957 841 aa16.6■□□□□ 0.25
COL16A1-202ENST00000373668 TOMM22Q9NS69 142 aa16.6■□□□□ 0.25
COL16A1-202ENST00000373668 ZBTB1Q9Y2K1 713 aa16.6■□□□□ 0.25
COL16A1-202ENST00000373668 SYCE3A1L190 88 aa16.6■□□□□ 0.25
COL16A1-202ENST00000373668 WASHC4Q2M389 1173 aa16.6■□□□□ 0.25
COL16A1-202ENST00000373668 BEND3Q5T5X7 828 aa16.6■□□□□ 0.25
COL16A1-202ENST00000373668 PDE1AP54750 535 aa16.59■□□□□ 0.25
COL16A1-202ENST00000373668 CRB1P82279 1406 aa16.59■□□□□ 0.25
COL16A1-202ENST00000373668 SSH2Q76I76 1423 aa16.59■□□□□ 0.25
COL16A1-202ENST00000373668 RTL1A6NKG5 1358 aa16.59■□□□□ 0.25
COL16A1-202ENST00000373668 SOS1Q07889 1333 aaPredicted RBP16.59■□□□□ 0.25
COL16A1-202ENST00000373668 DZIP3Q86Y13 1208 aaKnown RBP16.59■□□□□ 0.25
COL16A1-202ENST00000373668 KIF1BPQ96EK5 621 aa16.59■□□□□ 0.25
COL16A1-202ENST00000373668 CWC25Q9NXE8 425 aaPredicted RBP16.59■□□□□ 0.25
COL16A1-202ENST00000373668 IQSEC2Q5JU85 1478 aa16.59■□□□□ 0.25
COL16A1-202ENST00000373668 REC8O95072 547 aa16.59■□□□□ 0.25
COL16A1-202ENST00000373668 APPP05067 770 aa16.59■□□□□ 0.25
COL16A1-202ENST00000373668 CHAMP1Q96JM3 812 aa16.59■□□□□ 0.25
COL16A1-202ENST00000373668 FOSBP53539 338 aa16.58■□□□□ 0.25
COL16A1-202ENST00000373668 HSP90AB3PQ58FF7 597 aa16.58■□□□□ 0.25
COL16A1-202ENST00000373668 ZNF219Q9P2Y4 722 aaPredicted RBP16.58■□□□□ 0.25
COL16A1-202ENST00000373668 SOS2Q07890 1332 aaPredicted RBP16.58■□□□□ 0.24
COL16A1-202ENST00000373668 ZSCAN23Q3MJ62 389 aa16.58■□□□□ 0.24
COL16A1-202ENST00000373668 KDRP35968 1356 aa16.58■□□□□ 0.24
COL16A1-202ENST00000373668 MCCP23508 829 aa16.58■□□□□ 0.24
COL16A1-202ENST00000373668 ZGPATQ8N5A5 531 aaKnown RBP16.58■□□□□ 0.24
COL16A1-202ENST00000373668 PPP1R1BQ9UD71 204 aaPredicted RBP16.57■□□□□ 0.24
COL16A1-202ENST00000373668 HSPA1LP34931 641 aa16.57■□□□□ 0.24
COL16A1-202ENST00000373668 PKP1Q13835 747 aa16.57■□□□□ 0.24
COL16A1-202ENST00000373668 DDX46Q7L014 1031 aaKnown RBP16.57■□□□□ 0.24
COL16A1-202ENST00000373668 HSP90AB4PQ58FF6 505 aa16.57■□□□□ 0.24
COL16A1-202ENST00000373668 ITSN1Q15811 1721 aa16.56■□□□□ 0.24
COL16A1-202ENST00000373668 LDHAL6AQ6ZMR3 332 aa16.56■□□□□ 0.24
COL16A1-202ENST00000373668 TCEANC2Q96MN5 208 aa16.56■□□□□ 0.24
COL16A1-202ENST00000373668 JAG2Q9Y219 1238 aa16.56■□□□□ 0.24
COL16A1-202ENST00000373668 NIP7Q9Y221 180 aaKnown RBP eCLIP16.56■□□□□ 0.24
COL16A1-202ENST00000373668 GCKRQ14397 625 aa16.56■□□□□ 0.24
COL16A1-202ENST00000373668 EPHA10Q5JZY3 1008 aa16.56■□□□□ 0.24
COL16A1-202ENST00000373668 CEP126Q9P2H0 1117 aa16.56■□□□□ 0.24
COL16A1-202ENST00000373668 UQCRHLA0A096LP55 91 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms