RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 SERPINB2P05120 415 aa10.28□□□□□ -0.76
SP140-202ENST00000373645 POTEJP0CG39 1038 aa10.28□□□□□ -0.76
SP140-202ENST00000373645 IL13P35225 146 aa10.28□□□□□ -0.76
SP140-202ENST00000373645 BICDL1Q6ZP65 573 aa10.28□□□□□ -0.76
SP140-202ENST00000373645 RNMTO43148 476 aaKnown RBP10.27□□□□□ -0.77
SP140-202ENST00000373645 VEGFAP15692 232 aaPredicted RBP10.27□□□□□ -0.77
SP140-202ENST00000373645 CCDC184Q52MB2 194 aa10.27□□□□□ -0.77
SP140-202ENST00000373645 C2CD5Q86YS7 1000 aa10.27□□□□□ -0.77
SP140-202ENST00000373645 TTLL6Q8N841 843 aa10.27□□□□□ -0.77
SP140-202ENST00000373645 CFAP53Q96M91 514 aa10.27□□□□□ -0.77
SP140-202ENST00000373645 MRS2Q9HD23 443 aa10.27□□□□□ -0.77
SP140-202ENST00000373645 NARFQ9UHQ1 456 aa10.27□□□□□ -0.77
SP140-202ENST00000373645 UBR2Q8IWV8 1755 aa10.26□□□□□ -0.77
SP140-202ENST00000373645 HMOX1P09601 288 aa10.26□□□□□ -0.77
SP140-202ENST00000373645 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
SP140-202ENST00000373645 ZC3H4Q9UPT8 1303 aaKnown RBP10.26□□□□□ -0.77
SP140-202ENST00000373645 SCN7AQ01118 1682 aa10.25□□□□□ -0.77
SP140-202ENST00000373645 CANXP27824 592 aaKnown RBP10.25□□□□□ -0.77
SP140-202ENST00000373645 AKAP4Q5JQC9 854 aa10.25□□□□□ -0.77
SP140-202ENST00000373645 TBC1D9BQ66K14 1250 aa10.25□□□□□ -0.77
SP140-202ENST00000373645 FER1L6Q2WGJ9 1857 aa10.25□□□□□ -0.77
SP140-202ENST00000373645 C21orf2O43822 256 aa10.24□□□□□ -0.77
SP140-202ENST00000373645 MKRN1Q9UHC7 482 aaKnown RBP10.24□□□□□ -0.77
SP140-202ENST00000373645 SLX4Q8IY92 1834 aa10.23□□□□□ -0.77
SP140-202ENST00000373645 CACNA1SQ13698 1873 aa10.23□□□□□ -0.77
SP140-202ENST00000373645 MTHFSDQ2M296 383 aaKnown RBP10.23□□□□□ -0.77
SP140-202ENST00000373645 ERFEQ4G0M1 354 aa10.23□□□□□ -0.77
SP140-202ENST00000373645 PRR5LQ6MZQ0 368 aa10.23□□□□□ -0.77
SP140-202ENST00000373645 PNISRQ8TF01 805 aaKnown RBP10.23□□□□□ -0.77
SP140-202ENST00000373645 ZNF622Q969S3 477 aaKnown RBP eCLIP10.23□□□□□ -0.77
SP140-202ENST00000373645 FARP1Q9Y4F1 1045 aaPredicted RBP10.23□□□□□ -0.77
SP140-202ENST00000373645 DICER1Q9UPY3 1922 aaKnown RBP10.23□□□□□ -0.77
SP140-202ENST00000373645 H0YIN7 160 aa10.22□□□□□ -0.77
SP140-202ENST00000373645 DIAPH1O60610 1272 aaKnown RBP10.22□□□□□ -0.77
SP140-202ENST00000373645 DDNO94850 711 aaPredicted RBP10.22□□□□□ -0.77
SP140-202ENST00000373645 EIF5P55010 431 aaKnown RBP10.22□□□□□ -0.77
SP140-202ENST00000373645 ZNF496Q96IT1 587 aaPredicted RBP10.22□□□□□ -0.77
SP140-202ENST00000373645 TBC1D2BQ9UPU7 963 aa10.22□□□□□ -0.77
SP140-202ENST00000373645 NUDCQ9Y266 331 aa10.22□□□□□ -0.77
SP140-202ENST00000373645 ZNF330Q9Y3S2 320 aaPredicted RBP10.22□□□□□ -0.77
SP140-202ENST00000373645 FOXN1O15353 648 aa10.21□□□□□ -0.77
SP140-202ENST00000373645 PIP4K2AP48426 406 aaPredicted RBP10.21□□□□□ -0.77
SP140-202ENST00000373645 FAM9BQ8IZU0 186 aa10.21□□□□□ -0.77
SP140-202ENST00000373645 ZBTB22O15209 634 aa10.2□□□□□ -0.78
SP140-202ENST00000373645 WDR43Q15061 677 aaKnown RBP eCLIP10.2□□□□□ -0.78
SP140-202ENST00000373645 OLFM4Q6UX06 510 aa10.2□□□□□ -0.78
SP140-202ENST00000373645 TAOK3Q9H2K8 898 aa10.2□□□□□ -0.78
SP140-202ENST00000373645 CREBZFQ9NS37 354 aa10.2□□□□□ -0.78
SP140-202ENST00000373645 SIPA1L3O60292 1781 aaPredicted RBP10.19□□□□□ -0.78
SP140-202ENST00000373645 BCORQ6W2J9 1755 aa10.19□□□□□ -0.78
SP140-202ENST00000373645 COL3A1P02461 1466 aaPredicted RBP10.19□□□□□ -0.78
SP140-202ENST00000373645 CNTNAP1P78357 1384 aa10.19□□□□□ -0.78
SP140-202ENST00000373645 HEG1Q9ULI3 1381 aa10.19□□□□□ -0.78
SP140-202ENST00000373645 ZNF541Q9H0D2 1346 aa10.19□□□□□ -0.78
SP140-202ENST00000373645 KCNQ3O43525 872 aa10.19□□□□□ -0.78
SP140-202ENST00000373645 CAMTA2O94983 1202 aa10.19□□□□□ -0.78
SP140-202ENST00000373645 DPY19L2Q6NUT2 758 aa10.19□□□□□ -0.78
SP140-202ENST00000373645 PRPF40BQ6NWY9 871 aaKnown RBP10.19□□□□□ -0.78
SP140-202ENST00000373645 VSIG10Q8N0Z9 540 aa10.19□□□□□ -0.78
SP140-202ENST00000373645 ADAMTS8Q9UP79 889 aa10.19□□□□□ -0.78
SP140-202ENST00000373645 PASKQ96RG2 1323 aa10.18□□□□□ -0.78
SP140-202ENST00000373645 LTBP3Q9NS15 1303 aa10.18□□□□□ -0.78
SP140-202ENST00000373645 POTEMA6NI47 508 aa10.18□□□□□ -0.78
SP140-202ENST00000373645 U2SURPO15042 1029 aaKnown RBP10.18□□□□□ -0.78
SP140-202ENST00000373645 A1BGP04217 495 aa10.18□□□□□ -0.78
SP140-202ENST00000373645 CNBD1Q8NA66 436 aa10.18□□□□□ -0.78
SP140-202ENST00000373645 IL17REQ8NFR9 667 aa10.18□□□□□ -0.78
SP140-202ENST00000373645 BRIP1Q9BX63 1249 aa10.18□□□□□ -0.78
SP140-202ENST00000373645 ARFGEF2Q9Y6D5 1785 aa10.18□□□□□ -0.78
SP140-202ENST00000373645 PRAMEF22A3QJZ6 481 aa10.17□□□□□ -0.78
SP140-202ENST00000373645 STARD3NLO95772 234 aa10.17□□□□□ -0.78
SP140-202ENST00000373645 U2AF1L5P0DN76 240 aaPredicted RBP10.17□□□□□ -0.78
SP140-202ENST00000373645 SRGNP10124 158 aa10.17□□□□□ -0.78
SP140-202ENST00000373645 PDE6BP35913 854 aa10.17□□□□□ -0.78
SP140-202ENST00000373645 U2AF1Q01081 240 aaKnown RBP eCLIP10.17□□□□□ -0.78
SP140-202ENST00000373645 ZNF790Q6PG37 636 aa10.17□□□□□ -0.78
SP140-202ENST00000373645 SLC51AQ86UW1 340 aa10.17□□□□□ -0.78
SP140-202ENST00000373645 TTC5Q8N0Z6 440 aa10.17□□□□□ -0.78
SP140-202ENST00000373645 VEGFBP49765 207 aa10.16□□□□□ -0.78
SP140-202ENST00000373645 PNNQ9H307 717 aaKnown RBP10.16□□□□□ -0.78
SP140-202ENST00000373645 TAF1DQ9H5J8 278 aaPredicted RBP10.16□□□□□ -0.78
SP140-202ENST00000373645 ZNF277Q9NRM2 450 aaPredicted RBP10.16□□□□□ -0.78
SP140-202ENST00000373645 ADAMTSL1Q8N6G6 1762 aa10.16□□□□□ -0.78
SP140-202ENST00000373645 COL4A5P29400 1685 aa10.15□□□□□ -0.78
SP140-202ENST00000373645 A0A087WZG4 1122 aa10.15□□□□□ -0.78
SP140-202ENST00000373645 ITGBL1O95965 494 aaPredicted RBP10.15□□□□□ -0.78
SP140-202ENST00000373645 IL6STP40189 918 aaPredicted RBP10.15□□□□□ -0.78
SP140-202ENST00000373645 EAPPQ56P03 285 aaPredicted RBP10.15□□□□□ -0.78
SP140-202ENST00000373645 STYK1Q6J9G0 422 aa10.15□□□□□ -0.78
SP140-202ENST00000373645 C7orf43Q8WVR3 580 aa10.15□□□□□ -0.78
SP140-202ENST00000373645 L3MBTL3Q96JM7 780 aaPredicted RBP10.15□□□□□ -0.78
SP140-202ENST00000373645 RNF123Q5XPI4 1314 aa10.14□□□□□ -0.79
SP140-202ENST00000373645 NPHP1O15259 732 aa10.14□□□□□ -0.79
SP140-202ENST00000373645 LBX1P52954 281 aa10.14□□□□□ -0.79
SP140-202ENST00000373645 FMR1Q06787 632 aaKnown RBP eCLIP10.14□□□□□ -0.79
SP140-202ENST00000373645 TEFQ10587 303 aa10.14□□□□□ -0.79
SP140-202ENST00000373645 LDHDQ86WU2 507 aa10.14□□□□□ -0.79
SP140-202ENST00000373645 DZIP3Q86Y13 1208 aaKnown RBP10.14□□□□□ -0.79
SP140-202ENST00000373645 ZNF579Q8NAF0 562 aaKnown RBP10.14□□□□□ -0.79
SP140-202ENST00000373645 CNKSR1Q969H4 720 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 1798.6 ms