RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 NECTIN1Q15223 517 aa9.02□□□□□ -0.96
GARNL3-202ENST00000373387 LIMCH1Q9UPQ0 1083 aa9.02□□□□□ -0.96
GARNL3-202ENST00000373387 UQCRHLA0A096LP55 91 aa9.02□□□□□ -0.97
GARNL3-202ENST00000373387 NUTM2FA1L443 756 aa9.02□□□□□ -0.97
GARNL3-202ENST00000373387 STX6O43752 255 aa9.02□□□□□ -0.97
GARNL3-202ENST00000373387 UQCRHP07919 91 aa9.02□□□□□ -0.97
GARNL3-202ENST00000373387 MTMR6Q9Y217 621 aa9.02□□□□□ -0.97
GARNL3-202ENST00000373387 ABCC6O95255 1503 aa9.02□□□□□ -0.97
GARNL3-202ENST00000373387 LAMB4A4D0S4 1761 aa9.02□□□□□ -0.97
GARNL3-202ENST00000373387 AMPHP49418 695 aa9.02□□□□□ -0.97
GARNL3-202ENST00000373387 VPS53Q5VIR6 699 aa9.02□□□□□ -0.97
GARNL3-202ENST00000373387 RNF214Q8ND24 703 aa9.02□□□□□ -0.97
GARNL3-202ENST00000373387 MAP7D2Q96T17 732 aa9.02□□□□□ -0.97
GARNL3-202ENST00000373387 ALDH8A1Q9H2A2 487 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-202ENST00000373387 SETD1BQ9UPS6 1966 aaKnown RBP9.01□□□□□ -0.97
GARNL3-202ENST00000373387 LETM1O95202 739 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-202ENST00000373387 PTH1RQ03431 593 aa9.01□□□□□ -0.97
GARNL3-202ENST00000373387 HDGFL1Q5TGJ6 251 aa9.01□□□□□ -0.97
GARNL3-202ENST00000373387 CCDC171Q6TFL3 1326 aa9.01□□□□□ -0.97
GARNL3-202ENST00000373387 ZMYND15Q9H091 742 aa9.01□□□□□ -0.97
GARNL3-202ENST00000373387 ALS2Q96Q42 1657 aa9.01□□□□□ -0.97
GARNL3-202ENST00000373387 MST1RQ04912 1400 aa9.01□□□□□ -0.97
GARNL3-202ENST00000373387 MED23Q9ULK4 1368 aa9.01□□□□□ -0.97
GARNL3-202ENST00000373387 ADCK5Q3MIX3 580 aa9.01□□□□□ -0.97
GARNL3-202ENST00000373387 CNTROBQ8N137 903 aa9.01□□□□□ -0.97
GARNL3-202ENST00000373387 MYRIPQ8NFW9 859 aa9.01□□□□□ -0.97
GARNL3-202ENST00000373387 SLC26A8Q96RN1 970 aa9.01□□□□□ -0.97
GARNL3-202ENST00000373387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-202ENST00000373387 SURF6O75683 361 aaKnown RBP9□□□□□ -0.97
GARNL3-202ENST00000373387 KAZALD1Q96I82 304 aa9□□□□□ -0.97
GARNL3-202ENST00000373387 ESF1Q9H501 851 aaKnown RBP9□□□□□ -0.97
GARNL3-202ENST00000373387 NUP188Q5SRE5 1749 aa9□□□□□ -0.97
GARNL3-202ENST00000373387 COL9A3Q14050 684 aaPredicted RBP9□□□□□ -0.97
GARNL3-202ENST00000373387 DNAAF4Q8WXU2 420 aa9□□□□□ -0.97
GARNL3-202ENST00000373387 NECTIN2Q92692 538 aa9□□□□□ -0.97
GARNL3-202ENST00000373387 CHPF2Q9P2E5 772 aa9□□□□□ -0.97
GARNL3-202ENST00000373387 COL18A1P39060 1754 aa9□□□□□ -0.97
GARNL3-202ENST00000373387 TJP1Q07157 1748 aa9□□□□□ -0.97
GARNL3-202ENST00000373387 SRGAP3O43295 1099 aa9□□□□□ -0.97
GARNL3-202ENST00000373387 MAP4K4O95819 1239 aaPredicted RBP9□□□□□ -0.97
GARNL3-202ENST00000373387 KIAA2012Q0VF49 1180 aa9□□□□□ -0.97
GARNL3-202ENST00000373387 RBM43Q6ZSC3 357 aaKnown RBP9□□□□□ -0.97
GARNL3-202ENST00000373387 NOL8Q76FK4 1167 aaKnown RBP9□□□□□ -0.97
GARNL3-202ENST00000373387 ZSCAN21Q9Y5A6 473 aaPredicted RBP9□□□□□ -0.97
GARNL3-202ENST00000373387 PKD1L3Q7Z443 1732 aa9□□□□□ -0.97
GARNL3-202ENST00000373387 PARP4Q9UKK3 1724 aaKnown RBP9□□□□□ -0.97
GARNL3-202ENST00000373387 KIF1AQ12756 1690 aa8.99□□□□□ -0.97
GARNL3-202ENST00000373387 ELP1O95163 1332 aa8.99□□□□□ -0.97
GARNL3-202ENST00000373387 SOX12O15370 315 aa8.99□□□□□ -0.97
GARNL3-202ENST00000373387 KDM4AO75164 1064 aa8.99□□□□□ -0.97
GARNL3-202ENST00000373387 ZNF710Q8N1W2 664 aa8.99□□□□□ -0.97
GARNL3-202ENST00000373387 IP6K1Q92551 441 aa8.99□□□□□ -0.97
GARNL3-202ENST00000373387 KCNF1Q9H3M0 494 aa8.99□□□□□ -0.97
GARNL3-202ENST00000373387 LGR6Q9HBX8 967 aa8.99□□□□□ -0.97
GARNL3-202ENST00000373387 GLRX3O76003 335 aaKnown RBP8.99□□□□□ -0.97
GARNL3-202ENST00000373387 KCNQ3O43525 872 aa8.99□□□□□ -0.97
GARNL3-202ENST00000373387 NLRP6P59044 892 aa8.99□□□□□ -0.97
GARNL3-202ENST00000373387 MAP4K1Q92918 833 aa8.99□□□□□ -0.97
GARNL3-202ENST00000373387 PI4KAP2A4QPH2 592 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 CPA1P15085 419 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 HMGN5P82970 282 aaKnown RBP8.98□□□□□ -0.97
GARNL3-202ENST00000373387 ME3Q16798 604 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 HSP90AB4PQ58FF6 505 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 NBPF6Q5VWK0 638 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 PI4KAP1Q8N8J0 262 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 NBPF4Q96M43 638 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 SH2B1Q9NRF2 756 aaPredicted RBP8.98□□□□□ -0.97
GARNL3-202ENST00000373387 USP25Q9UHP3 1055 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 ADAMTSL3P82987 1691 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 ALDH1L1O75891 902 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 ADCY5O95622 1261 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 HCLS1P14317 486 aaPredicted RBP8.98□□□□□ -0.97
GARNL3-202ENST00000373387 TSGA10IPQ3SY00 556 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 NGDNQ8NEJ9 315 aaKnown RBP8.98□□□□□ -0.97
GARNL3-202ENST00000373387 PRIMPOLQ96LW4 560 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 PRDM4Q9UKN5 801 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 SPG7Q9UQ90 795 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 GJB2P29033 226 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 RBM10P98175 930 aaKnown RBP8.98□□□□□ -0.97
GARNL3-202ENST00000373387 CWC27Q6UX04 472 aaKnown RBP8.98□□□□□ -0.97
GARNL3-202ENST00000373387 MTERF4Q7Z6M4 381 aaKnown RBP8.98□□□□□ -0.97
GARNL3-202ENST00000373387 VSIG10Q8N0Z9 540 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 ZSCAN31Q96LW9 406 aaPredicted RBP8.98□□□□□ -0.97
GARNL3-202ENST00000373387 COL15A1P39059 1388 aa8.98□□□□□ -0.97
GARNL3-202ENST00000373387 CASTP20810 708 aaKnown RBP8.97□□□□□ -0.97
GARNL3-202ENST00000373387 NOLC1Q14978 699 aaKnown RBP eCLIP8.97□□□□□ -0.97
GARNL3-202ENST00000373387 UBR2Q8IWV8 1755 aa8.97□□□□□ -0.97
GARNL3-202ENST00000373387 SASH1O94885 1247 aa8.97□□□□□ -0.97
GARNL3-202ENST00000373387 KIAA1524Q8TCG1 905 aa8.97□□□□□ -0.97
GARNL3-202ENST00000373387 ECHDC1Q9NTX5 307 aa8.97□□□□□ -0.97
GARNL3-202ENST00000373387 TPCN1Q9ULQ1 816 aa8.97□□□□□ -0.97
GARNL3-202ENST00000373387 NWD2Q9ULI1 1742 aa8.97□□□□□ -0.97
GARNL3-202ENST00000373387 DNM1Q05193 864 aaKnown RBP8.97□□□□□ -0.97
GARNL3-202ENST00000373387 AKAP4Q5JQC9 854 aa8.97□□□□□ -0.97
GARNL3-202ENST00000373387 SPEF2Q9C093 1822 aa8.97□□□□□ -0.97
GARNL3-202ENST00000373387 USHBP1Q8N6Y0 703 aa8.96□□□□□ -0.97
GARNL3-202ENST00000373387 EVI5LQ96CN4 794 aa8.96□□□□□ -0.97
GARNL3-202ENST00000373387 PDIA6Q15084 440 aa8.96□□□□□ -0.98
GARNL3-202ENST00000373387 USPL1Q5W0Q7 1092 aa8.96□□□□□ -0.98
GARNL3-202ENST00000373387 PAPPAQ13219 1627 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms