RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 ZNF530Q6P9A1 599 aaPredicted RBP12.53□□□□□ -0.4
PGK1-201ENST00000373316 ZNF142P52746 1687 aaPredicted RBP12.52□□□□□ -0.4
PGK1-201ENST00000373316 RRP9O43818 475 aaKnown RBP12.52□□□□□ -0.4
PGK1-201ENST00000373316 C1orf115Q9H7X2 142 aa12.52□□□□□ -0.41
PGK1-201ENST00000373316 HYPKQ9NX55 129 aa12.52□□□□□ -0.41
PGK1-201ENST00000373316 CEP131Q9UPN4 1083 aa12.52□□□□□ -0.41
PGK1-201ENST00000373316 ADGRB2O60241 1585 aa12.52□□□□□ -0.41
PGK1-201ENST00000373316 TOPAZ1Q8N9V7 1692 aa12.52□□□□□ -0.41
PGK1-201ENST00000373316 FAM13BQ9NYF5 915 aa12.52□□□□□ -0.41
PGK1-201ENST00000373316 HMG20BQ9P0W2 317 aa12.52□□□□□ -0.41
PGK1-201ENST00000373316 ANKRD26Q9UPS8 1709 aa12.52□□□□□ -0.41
PGK1-201ENST00000373316 WASHC4Q2M389 1173 aa12.51□□□□□ -0.41
PGK1-201ENST00000373316 NOL7Q9UMY1 257 aaKnown RBP12.51□□□□□ -0.41
PGK1-201ENST00000373316 TRIM34Q9BYJ4 488 aa12.51□□□□□ -0.41
PGK1-201ENST00000373316 TRIM5Q9C035 493 aa12.51□□□□□ -0.41
PGK1-201ENST00000373316 LMTK3Q96Q04 1460 aa12.51□□□□□ -0.41
PGK1-201ENST00000373316 TUBB4AP04350 444 aa12.51□□□□□ -0.41
PGK1-201ENST00000373316 HSP90B2PQ58FF3 399 aa12.51□□□□□ -0.41
PGK1-201ENST00000373316 TTC39AQ5SRH9 613 aa12.51□□□□□ -0.41
PGK1-201ENST00000373316 CEP57L1Q8IYX8 460 aa12.51□□□□□ -0.41
PGK1-201ENST00000373316 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
PGK1-201ENST00000373316 STK38Q15208 465 aa12.51□□□□□ -0.41
PGK1-201ENST00000373316 CCDC183Q5T5S1 534 aa12.51□□□□□ -0.41
PGK1-201ENST00000373316 TNMDQ9H2S6 317 aa12.51□□□□□ -0.41
PGK1-201ENST00000373316 PHAXQ9H814 394 aaKnown RBP12.51□□□□□ -0.41
PGK1-201ENST00000373316 NEUROD6Q96NK8 337 aa12.5□□□□□ -0.41
PGK1-201ENST00000373316 PYM1Q9BRP8 204 aaKnown RBP12.5□□□□□ -0.41
PGK1-201ENST00000373316 AATKQ6ZMQ8 1374 aa12.5□□□□□ -0.41
PGK1-201ENST00000373316 IGHDP01880 384 aa12.5□□□□□ -0.41
PGK1-201ENST00000373316 NUCB1Q02818 461 aa12.5□□□□□ -0.41
PGK1-201ENST00000373316 HSP90AB3PQ58FF7 597 aa12.5□□□□□ -0.41
PGK1-201ENST00000373316 NRKQ7Z2Y5 1582 aa12.5□□□□□ -0.41
PGK1-201ENST00000373316 C1orf167Q5SNV9 1468 aa12.5□□□□□ -0.41
PGK1-201ENST00000373316 MPRIPQ6WCQ1 1025 aa12.5□□□□□ -0.41
PGK1-201ENST00000373316 LGR6Q9HBX8 967 aa12.5□□□□□ -0.41
PGK1-201ENST00000373316 U3KPZ7 1027 aaPredicted RBP12.5□□□□□ -0.41
PGK1-201ENST00000373316 FLT4P35916 1363 aa12.49□□□□□ -0.41
PGK1-201ENST00000373316 ESPNB1AK53 854 aa12.49□□□□□ -0.41
PGK1-201ENST00000373316 STIM1Q13586 685 aa12.49□□□□□ -0.41
PGK1-201ENST00000373316 FMN2Q9NZ56 1722 aa12.49□□□□□ -0.41
PGK1-201ENST00000373316 CDK12Q9NYV4 1490 aaPredicted RBP12.49□□□□□ -0.41
PGK1-201ENST00000373316 TAF3Q5VWG9 929 aa12.49□□□□□ -0.41
PGK1-201ENST00000373316 IQCEQ6IPM2 695 aa12.49□□□□□ -0.41
PGK1-201ENST00000373316 NUP62CLQ9H1M0 184 aa12.49□□□□□ -0.41
PGK1-201ENST00000373316 CCDC9Q9Y3X0 531 aaKnown RBP12.49□□□□□ -0.41
PGK1-201ENST00000373316 LARP1BQ659C4 914 aaKnown RBP12.49□□□□□ -0.41
PGK1-201ENST00000373316 EP400Q96L91 3159 aa12.49□□□□□ -0.41
PGK1-201ENST00000373316 PIP4K2BP78356 416 aa12.49□□□□□ -0.41
PGK1-201ENST00000373316 HS1BP3Q53T59 392 aa12.49□□□□□ -0.41
PGK1-201ENST00000373316 BRINP3Q76B58 766 aa12.49□□□□□ -0.41
PGK1-201ENST00000373316 BTBD11A6QL63 1104 aa12.48□□□□□ -0.41
PGK1-201ENST00000373316 CABP4P57796 275 aa12.48□□□□□ -0.41
PGK1-201ENST00000373316 SRCAPQ6ZRS2 3230 aa12.48□□□□□ -0.41
PGK1-201ENST00000373316 TRIM27P14373 513 aa12.48□□□□□ -0.41
PGK1-201ENST00000373316 KLHL34Q8N239 644 aa12.48□□□□□ -0.41
PGK1-201ENST00000373316 TEX13AQ9BXU3 409 aaPredicted RBP12.48□□□□□ -0.41
PGK1-201ENST00000373316 DDX19AQ9NUU7 478 aaKnown RBP12.48□□□□□ -0.41
PGK1-201ENST00000373316 SRGAP3O43295 1099 aa12.48□□□□□ -0.41
PGK1-201ENST00000373316 EVI5LQ96CN4 794 aa12.48□□□□□ -0.41
PGK1-201ENST00000373316 USP31Q70CQ4 1352 aa12.48□□□□□ -0.41
PGK1-201ENST00000373316 KCNQ3O43525 872 aa12.48□□□□□ -0.41
PGK1-201ENST00000373316 ZNF771Q7L3S4 317 aaPredicted RBP12.48□□□□□ -0.41
PGK1-201ENST00000373316 ANKRD24Q8TF21 1146 aa12.48□□□□□ -0.41
PGK1-201ENST00000373316 MAGEC2Q9UBF1 373 aaPredicted RBP12.48□□□□□ -0.41
PGK1-201ENST00000373316 RDXP35241 583 aaKnown RBP12.47□□□□□ -0.41
PGK1-201ENST00000373316 RUFY1Q96T51 708 aa12.47□□□□□ -0.41
PGK1-201ENST00000373316 DBF4Q9UBU7 674 aaPredicted RBP12.47□□□□□ -0.41
PGK1-201ENST00000373316 SBNO1A3KN83 1393 aa12.47□□□□□ -0.41
PGK1-201ENST00000373316 MAP3K11Q16584 847 aa12.47□□□□□ -0.41
PGK1-201ENST00000373316 CCDC57Q2TAC2 916 aa12.47□□□□□ -0.41
PGK1-201ENST00000373316 KLHL40Q2TBA0 621 aa12.47□□□□□ -0.41
PGK1-201ENST00000373316 STRN4Q9NRL3 753 aa12.47□□□□□ -0.41
PGK1-201ENST00000373316 ERLIN1O75477 346 aa12.47□□□□□ -0.41
PGK1-201ENST00000373316 ANXA1P04083 346 aa12.47□□□□□ -0.41
PGK1-201ENST00000373316 SPATA32Q96LK8 384 aa12.47□□□□□ -0.41
PGK1-201ENST00000373316 SLAIN2Q9P270 581 aa12.47□□□□□ -0.41
PGK1-201ENST00000373316 TTC22Q5TAA0 569 aa12.46□□□□□ -0.41
PGK1-201ENST00000373316 LIMCH1Q9UPQ0 1083 aa12.46□□□□□ -0.41
PGK1-201ENST00000373316 CCDC196A0A1B0GTZ2 297 aa12.46□□□□□ -0.41
PGK1-201ENST00000373316 PCMTD1Q96MG8 357 aaPredicted RBP12.46□□□□□ -0.41
PGK1-201ENST00000373316 PCDHB15Q9Y5E8 787 aa12.46□□□□□ -0.41
PGK1-201ENST00000373316 AACSQ86V21 672 aa12.46□□□□□ -0.42
PGK1-201ENST00000373316 CEP126Q9P2H0 1117 aa12.46□□□□□ -0.42
PGK1-201ENST00000373316 ALDH1L1O75891 902 aa12.45□□□□□ -0.42
PGK1-201ENST00000373316 IMMTQ16891 758 aaKnown RBP12.45□□□□□ -0.42
PGK1-201ENST00000373316 ZNHIT6Q9NWK9 470 aaKnown RBP12.45□□□□□ -0.42
PGK1-201ENST00000373316 R3HCC1Q9Y3T6 440 aaKnown RBP12.45□□□□□ -0.42
PGK1-201ENST00000373316 ANKARQ7Z5J8 1434 aa12.45□□□□□ -0.42
PGK1-201ENST00000373316 MSH6P52701 1360 aa12.45□□□□□ -0.42
PGK1-201ENST00000373316 AOX1Q06278 1338 aa12.45□□□□□ -0.42
PGK1-201ENST00000373316 PES1O00541 588 aaKnown RBP12.45□□□□□ -0.42
PGK1-201ENST00000373316 CLSTN1O94985 981 aa12.45□□□□□ -0.42
PGK1-201ENST00000373316 IL17REQ8NFR9 667 aa12.45□□□□□ -0.42
PGK1-201ENST00000373316 ZNF592Q92610 1267 aa12.45□□□□□ -0.42
PGK1-201ENST00000373316 ANO10Q9NW15 660 aa12.45□□□□□ -0.42
PGK1-201ENST00000373316 MST1RQ04912 1400 aa12.45□□□□□ -0.42
PGK1-201ENST00000373316 SMC2O95347 1197 aa12.45□□□□□ -0.42
PGK1-201ENST00000373316 MCM3P25205 808 aa12.45□□□□□ -0.42
PGK1-201ENST00000373316 GBP3Q9H0R5 595 aa12.45□□□□□ -0.42
PGK1-201ENST00000373316 ZNF287Q9HBT7 754 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 618.5 ms