RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 EXOSC9Q06265 439 aaKnown RBP10.4□□□□□ -0.74
PTPRT-206ENST00000373198 SSRP1Q08945 709 aaKnown RBP10.4□□□□□ -0.74
PTPRT-206ENST00000373198 SLF2Q8IX21 1173 aa10.4□□□□□ -0.74
PTPRT-206ENST00000373198 EPSTI1Q96J88 318 aa10.4□□□□□ -0.74
PTPRT-206ENST00000373198 YEATS4O95619 227 aa10.4□□□□□ -0.75
PTPRT-206ENST00000373198 CCDC117Q8IWD4 279 aaPredicted RBP10.4□□□□□ -0.75
PTPRT-206ENST00000373198 GTPBP4Q9BZE4 634 aaKnown RBP10.4□□□□□ -0.75
PTPRT-206ENST00000373198 GOLGA8BA8MQT2 603 aa10.39□□□□□ -0.75
PTPRT-206ENST00000373198 AKNAD1Q5T1N1 836 aa10.39□□□□□ -0.75
PTPRT-206ENST00000373198 JPH4Q96JJ6 628 aa10.39□□□□□ -0.75
PTPRT-206ENST00000373198 KRT32Q14532 448 aa10.39□□□□□ -0.75
PTPRT-206ENST00000373198 PHAXQ9H814 394 aaKnown RBP10.39□□□□□ -0.75
PTPRT-206ENST00000373198 IFIT1P09914 478 aaKnown RBP10.39□□□□□ -0.75
PTPRT-206ENST00000373198 STXBP4Q6ZWJ1 553 aa10.39□□□□□ -0.75
PTPRT-206ENST00000373198 C8orf76Q96K31 380 aa10.39□□□□□ -0.75
PTPRT-206ENST00000373198 MIS18AQ9NYP9 233 aa10.39□□□□□ -0.75
PTPRT-206ENST00000373198 BOLA2Q9H3K6 86 aa10.39□□□□□ -0.75
PTPRT-206ENST00000373198 PPP1R9BQ96SB3 815 aa10.39□□□□□ -0.75
PTPRT-206ENST00000373198 PPP6R1Q9UPN7 881 aa10.39□□□□□ -0.75
PTPRT-206ENST00000373198 SLC5A1P13866 664 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 CCDC83Q8IWF9 413 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 MPRIPQ6WCQ1 1025 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 TMOD3Q9NYL9 352 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 TBCAO75347 108 aaKnown RBP10.38□□□□□ -0.75
PTPRT-206ENST00000373198 GEN1Q17RS7 908 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 ISM2Q6H9L7 571 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 IQCA1Q86XH1 822 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 KIF18AQ8NI77 898 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 CCT2P78371 535 aaKnown RBP10.38□□□□□ -0.75
PTPRT-206ENST00000373198 JADE2Q9NQC1 790 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 BIN1O00499 593 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 CCT6BQ92526 530 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 PRAM1Q96QH2 718 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 PRKRIP1Q9H875 184 aaPredicted RBP10.38□□□□□ -0.75
PTPRT-206ENST00000373198 ZSWIM4Q9H7M6 989 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 ZSCAN12O43309 604 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 GMNNO75496 209 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 CNNM3Q8NE01 707 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 PRPF31Q8WWY3 499 aaKnown RBP10.38□□□□□ -0.75
PTPRT-206ENST00000373198 ARHGAP5Q13017 1502 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 C16orf45Q96MC5 204 aaPredicted RBP10.38□□□□□ -0.75
PTPRT-206ENST00000373198 ADAMTS8Q9UP79 889 aa10.38□□□□□ -0.75
PTPRT-206ENST00000373198 KIF5AQ12840 1032 aa10.37□□□□□ -0.75
PTPRT-206ENST00000373198 CIZ1Q9ULV3 898 aaPredicted RBP10.37□□□□□ -0.75
PTPRT-206ENST00000373198 ZC3H6P61129 1189 aaKnown RBP10.37□□□□□ -0.75
PTPRT-206ENST00000373198 SEPT6Q14141 434 aa10.37□□□□□ -0.75
PTPRT-206ENST00000373198 GCC1Q96CN9 775 aa10.37□□□□□ -0.75
PTPRT-206ENST00000373198 GOLGA8AA7E2F4 631 aa10.37□□□□□ -0.75
PTPRT-206ENST00000373198 MAP3K12Q12852 859 aa10.37□□□□□ -0.75
PTPRT-206ENST00000373198 CCDC155Q8N6L0 562 aa10.37□□□□□ -0.75
PTPRT-206ENST00000373198 RNF216Q9NWF9 866 aaPredicted RBP10.37□□□□□ -0.75
PTPRT-206ENST00000373198 CUL4BQ13620 913 aa10.37□□□□□ -0.75
PTPRT-206ENST00000373198 PANK2Q9BZ23 570 aa10.37□□□□□ -0.75
PTPRT-206ENST00000373198 IFIT3O14879 490 aaKnown RBP10.37□□□□□ -0.75
PTPRT-206ENST00000373198 TCP11L2Q8N4U5 519 aa10.37□□□□□ -0.75
PTPRT-206ENST00000373198 ATXN8OSP0DMR3 200 aa10.37□□□□□ -0.75
PTPRT-206ENST00000373198 KIF4AO95239 1232 aa10.37□□□□□ -0.75
PTPRT-206ENST00000373198 GABPAQ06546 454 aa10.37□□□□□ -0.75
PTPRT-206ENST00000373198 RAB11FIP4Q86YS3 637 aa10.37□□□□□ -0.75
PTPRT-206ENST00000373198 CCDC50Q8IVM0 306 aa10.37□□□□□ -0.75
PTPRT-206ENST00000373198 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.37□□□□□ -0.75
PTPRT-206ENST00000373198 V9GYY5 206 aaPredicted RBP10.37□□□□□ -0.75
PTPRT-206ENST00000373198 NCBP1Q09161 790 aaKnown RBP10.36□□□□□ -0.75
PTPRT-206ENST00000373198 ZSCAN31Q96LW9 406 aaPredicted RBP10.36□□□□□ -0.75
PTPRT-206ENST00000373198 RRS1Q15050 365 aaKnown RBP10.36□□□□□ -0.75
PTPRT-206ENST00000373198 MYD88Q99836 296 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 CCDC196A0A1B0GTZ2 297 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 SMIM23A6NLE4 172 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 HYPKQ9NX55 129 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 STX6O43752 255 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 KRT13P13646 458 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 RASA3Q14644 834 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 TCP11L1Q9NUJ3 509 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 NAA25Q14CX7 972 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 KIAA0753Q2KHM9 967 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 DNAAF4Q8WXU2 420 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 SMARCC1Q92922 1105 aaPredicted RBP10.36□□□□□ -0.75
PTPRT-206ENST00000373198 CABP5Q9NP86 173 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 MKRN1Q9UHC7 482 aaKnown RBP10.36□□□□□ -0.75
PTPRT-206ENST00000373198 CDK19Q9BWU1 502 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 HSF2BPO75031 334 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 FLIIQ13045 1269 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 TMC6Q7Z403 805 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 ARID5AQ03989 594 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 PNISRQ8TF01 805 aaKnown RBP10.36□□□□□ -0.75
PTPRT-206ENST00000373198 AKAP2Q9Y2D5 859 aa10.36□□□□□ -0.75
PTPRT-206ENST00000373198 F8W031 263 aaPredicted RBP10.36□□□□□ -0.75
PTPRT-206ENST00000373198 IFIT5Q13325 482 aaKnown RBP10.36□□□□□ -0.75
PTPRT-206ENST00000373198 SEPT14Q6ZU15 432 aa10.35□□□□□ -0.75
PTPRT-206ENST00000373198 PRPF40BQ6NWY9 871 aaKnown RBP10.35□□□□□ -0.75
PTPRT-206ENST00000373198 EP400NLQ6ZTU2 488 aa10.35□□□□□ -0.75
PTPRT-206ENST00000373198 GPTP24298 496 aa10.35□□□□□ -0.75
PTPRT-206ENST00000373198 TXNDC16Q9P2K2 825 aa10.35□□□□□ -0.75
PTPRT-206ENST00000373198 PPFIA3O75145 1194 aa10.35□□□□□ -0.75
PTPRT-206ENST00000373198 TTF1Q15361 905 aaPredicted RBP10.35□□□□□ -0.75
PTPRT-206ENST00000373198 CCDC65Q8IXS2 484 aa10.35□□□□□ -0.75
PTPRT-206ENST00000373198 NGLY1Q96IV0 654 aa10.35□□□□□ -0.75
PTPRT-206ENST00000373198 SMC6Q96SB8 1091 aa10.35□□□□□ -0.75
PTPRT-206ENST00000373198 HLA-DOAP06340 250 aa10.35□□□□□ -0.75
PTPRT-206ENST00000373198 PPP2R5CQ13362 524 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 752.6 ms