RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 CNNM3Q8NE01 707 aa17.55■□□□□ 0.4
GTF3C4-201ENST00000372146 ODF2LQ9ULJ1 636 aa17.55■□□□□ 0.4
GTF3C4-201ENST00000372146 SMIM23A6NLE4 172 aa17.55■□□□□ 0.4
GTF3C4-201ENST00000372146 PIP4K2BP78356 416 aa17.55■□□□□ 0.4
GTF3C4-201ENST00000372146 NOLC1Q14978 699 aaKnown RBP eCLIP17.55■□□□□ 0.4
GTF3C4-201ENST00000372146 ZBTB17Q13105 803 aa17.55■□□□□ 0.4
GTF3C4-201ENST00000372146 CTAGE15A4D2H0 777 aa17.54■□□□□ 0.4
GTF3C4-201ENST00000372146 CTAGE8P0CG41 777 aa17.54■□□□□ 0.4
GTF3C4-201ENST00000372146 TERF1P54274 439 aa17.54■□□□□ 0.4
GTF3C4-201ENST00000372146 ZSCAN23Q3MJ62 389 aa17.54■□□□□ 0.4
GTF3C4-201ENST00000372146 CTAGE4Q8IX94 777 aa17.54■□□□□ 0.4
GTF3C4-201ENST00000372146 IFI16Q16666 785 aaKnown RBP17.54■□□□□ 0.4
GTF3C4-201ENST00000372146 CCDC30Q5VVM6 783 aa17.54■□□□□ 0.4
GTF3C4-201ENST00000372146 FERMT1Q9BQL6 677 aa17.54■□□□□ 0.4
GTF3C4-201ENST00000372146 AP1ARQ63HQ0 302 aa17.54■□□□□ 0.4
GTF3C4-201ENST00000372146 MYCBPQ99417 103 aaPredicted RBP17.54■□□□□ 0.4
GTF3C4-201ENST00000372146 EID1Q9Y6B2 187 aa17.54■□□□□ 0.4
GTF3C4-201ENST00000372146 BIN1O00499 593 aa17.54■□□□□ 0.4
GTF3C4-201ENST00000372146 FMNL3Q8IVF7 1028 aa17.54■□□□□ 0.4
GTF3C4-201ENST00000372146 CCDC144CPQ8IYA2 1237 aa17.54■□□□□ 0.4
GTF3C4-201ENST00000372146 SRCIN1Q9C0H9 1055 aa17.54■□□□□ 0.4
GTF3C4-201ENST00000372146 SELENOOQ9BVL4 669 aa17.53■□□□□ 0.4
GTF3C4-201ENST00000372146 CCDC110Q8TBZ0 833 aa17.53■□□□□ 0.4
GTF3C4-201ENST00000372146 MTIF2P46199 727 aaKnown RBP17.53■□□□□ 0.4
GTF3C4-201ENST00000372146 FKBP4Q02790 459 aaKnown RBP eCLIP17.53■□□□□ 0.4
GTF3C4-201ENST00000372146 GSDMBQ8TAX9 411 aa17.53■□□□□ 0.4
GTF3C4-201ENST00000372146 RBM27Q9P2N5 1060 aaKnown RBP17.53■□□□□ 0.4
GTF3C4-201ENST00000372146 TPX2Q9ULW0 747 aaKnown RBP17.53■□□□□ 0.4
GTF3C4-201ENST00000372146 KRT13P13646 458 aa17.53■□□□□ 0.4
GTF3C4-201ENST00000372146 ACTN2P35609 894 aa17.53■□□□□ 0.4
GTF3C4-201ENST00000372146 VCXQ9H320 206 aa17.53■□□□□ 0.4
GTF3C4-201ENST00000372146 KIF5AQ12840 1032 aa17.53■□□□□ 0.4
GTF3C4-201ENST00000372146 NUF2Q9BZD4 464 aa17.53■□□□□ 0.4
GTF3C4-201ENST00000372146 CNNM1Q9NRU3 951 aa17.53■□□□□ 0.4
GTF3C4-201ENST00000372146 GNL3LQ9NVN8 582 aaKnown RBP17.53■□□□□ 0.4
GTF3C4-201ENST00000372146 HMGB1P09429 215 aaKnown RBP17.52■□□□□ 0.4
GTF3C4-201ENST00000372146 KRT32Q14532 448 aa17.52■□□□□ 0.4
GTF3C4-201ENST00000372146 TRIM7Q9C029 511 aa17.52■□□□□ 0.4
GTF3C4-201ENST00000372146 PDS5BQ9NTI5 1447 aa17.52■□□□□ 0.4
GTF3C4-201ENST00000372146 INTS8Q75QN2 995 aaKnown RBP17.52■□□□□ 0.4
GTF3C4-201ENST00000372146 DNAI1Q9UI46 699 aa17.52■□□□□ 0.4
GTF3C4-201ENST00000372146 RPAINQ86UA6 219 aa17.52■□□□□ 0.39
GTF3C4-201ENST00000372146 USP5P45974 858 aa17.52■□□□□ 0.39
GTF3C4-201ENST00000372146 SEC63Q9UGP8 760 aaKnown RBP17.52■□□□□ 0.39
GTF3C4-201ENST00000372146 CFAP157Q5JU67 520 aa17.52■□□□□ 0.39
GTF3C4-201ENST00000372146 KIF6Q6ZMV9 814 aa17.52■□□□□ 0.39
GTF3C4-201ENST00000372146 GMNNO75496 209 aa17.51■□□□□ 0.39
GTF3C4-201ENST00000372146 POTEDQ86YR6 584 aa17.51■□□□□ 0.39
GTF3C4-201ENST00000372146 RRBP1Q9P2E9 1410 aaKnown RBP17.51■□□□□ 0.39
GTF3C4-201ENST00000372146 NEDD9Q14511 834 aa17.51■□□□□ 0.39
GTF3C4-201ENST00000372146 ISM2Q6H9L7 571 aa17.51■□□□□ 0.39
GTF3C4-201ENST00000372146 HDXQ7Z353 690 aa17.51■□□□□ 0.39
GTF3C4-201ENST00000372146 BICDL2A1A5D9 508 aa17.51■□□□□ 0.39
GTF3C4-201ENST00000372146 CAPZA3Q96KX2 299 aa17.51■□□□□ 0.39
GTF3C4-201ENST00000372146 FAM177BA6PVY3 158 aa17.5■□□□□ 0.39
GTF3C4-201ENST00000372146 BRD4O60885 1362 aaPredicted RBP17.5■□□□□ 0.39
GTF3C4-201ENST00000372146 KIF20AO95235 890 aa17.5■□□□□ 0.39
GTF3C4-201ENST00000372146 CDCA7LQ96GN5 454 aa17.5■□□□□ 0.39
GTF3C4-201ENST00000372146 INPP5BP32019 993 aa17.5■□□□□ 0.39
GTF3C4-201ENST00000372146 SSFA2P28290 1259 aa17.5■□□□□ 0.39
GTF3C4-201ENST00000372146 SEPT10Q9P0V9 454 aa17.5■□□□□ 0.39
GTF3C4-201ENST00000372146 KCNK9Q9NPC2 374 aa17.5■□□□□ 0.39
GTF3C4-201ENST00000372146 GSTA5Q7RTV2 222 aa17.5■□□□□ 0.39
GTF3C4-201ENST00000372146 PPFIA2O75334 1257 aa17.49■□□□□ 0.39
GTF3C4-201ENST00000372146 PEX19P40855 299 aa17.49■□□□□ 0.39
GTF3C4-201ENST00000372146 AACSQ86V21 672 aa17.49■□□□□ 0.39
GTF3C4-201ENST00000372146 SLU7O95391 586 aaKnown RBP17.49■□□□□ 0.39
GTF3C4-201ENST00000372146 MIER3Q7Z3K6 550 aa17.49■□□□□ 0.39
GTF3C4-201ENST00000372146 AFAP1L1Q8TED9 768 aa17.49■□□□□ 0.39
GTF3C4-201ENST00000372146 GBP5Q96PP8 586 aa17.49■□□□□ 0.39
GTF3C4-201ENST00000372146 PPP1R9BQ96SB3 815 aa17.49■□□□□ 0.39
GTF3C4-201ENST00000372146 PLVAPQ9BX97 442 aa17.49■□□□□ 0.39
GTF3C4-201ENST00000372146 COG7P83436 770 aa17.49■□□□□ 0.39
GTF3C4-201ENST00000372146 SKILP12757 684 aa17.48■□□□□ 0.39
GTF3C4-201ENST00000372146 LRRC43Q8N309 656 aa17.48■□□□□ 0.39
GTF3C4-201ENST00000372146 FSIP1Q8NA03 581 aa17.48■□□□□ 0.39
GTF3C4-201ENST00000372146 GKAP1Q5VSY0 366 aaPredicted RBP17.48■□□□□ 0.39
GTF3C4-201ENST00000372146 ZNF165P49910 485 aa17.48■□□□□ 0.39
GTF3C4-201ENST00000372146 HNRNPMP52272 730 aaKnown RBP eCLIP17.48■□□□□ 0.39
GTF3C4-201ENST00000372146 PDE3AQ14432 1141 aa17.48■□□□□ 0.39
GTF3C4-201ENST00000372146 RUFY3Q7L099 469 aa17.48■□□□□ 0.39
GTF3C4-201ENST00000372146 HPDP32754 393 aaPredicted RBP17.48■□□□□ 0.39
GTF3C4-201ENST00000372146 MAP7Q14244 749 aa17.48■□□□□ 0.39
GTF3C4-201ENST00000372146 ZNF428Q96B54 188 aa17.48■□□□□ 0.39
GTF3C4-201ENST00000372146 XAB2Q9HCS7 855 aaKnown RBP17.48■□□□□ 0.39
GTF3C4-201ENST00000372146 CETN1Q12798 172 aa17.48■□□□□ 0.39
GTF3C4-201ENST00000372146 IFT81Q8WYA0 676 aa17.48■□□□□ 0.39
GTF3C4-201ENST00000372146 ARHGEF2Q92974 986 aaKnown RBP17.48■□□□□ 0.39
GTF3C4-201ENST00000372146 NDC80O14777 642 aa17.47■□□□□ 0.39
GTF3C4-201ENST00000372146 PFDN1O60925 122 aa17.47■□□□□ 0.39
GTF3C4-201ENST00000372146 UBASH3AP57075 661 aa17.47■□□□□ 0.39
GTF3C4-201ENST00000372146 MINK1Q8N4C8 1332 aaPredicted RBP17.47■□□□□ 0.39
GTF3C4-201ENST00000372146 RHOXF2BP0C7M4 288 aa17.47■□□□□ 0.39
GTF3C4-201ENST00000372146 UBLCP1Q8WVY7 318 aaPredicted RBP17.47■□□□□ 0.39
GTF3C4-201ENST00000372146 C8orf76Q96K31 380 aa17.47■□□□□ 0.39
GTF3C4-201ENST00000372146 RHOXF2Q9BQY4 288 aa17.47■□□□□ 0.39
GTF3C4-201ENST00000372146 ZC4H2Q9NQZ6 224 aa17.47■□□□□ 0.39
GTF3C4-201ENST00000372146 MVPQ14764 893 aaKnown RBP17.47■□□□□ 0.39
GTF3C4-201ENST00000372146 USH1CQ9Y6N9 552 aa17.47■□□□□ 0.39
GTF3C4-201ENST00000372146 TRIM68Q6AZZ1 485 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms