RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 SPINK5Q9NQ38 1064 aaPredicted RBP13.83□□□□□ -0.2
DEPDC1-201ENST00000370966 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.2
DEPDC1-201ENST00000370966 YTHDC2Q9H6S0 1430 aaKnown RBP13.83□□□□□ -0.2
DEPDC1-201ENST00000370966 ANXA1P04083 346 aa13.83□□□□□ -0.2
DEPDC1-201ENST00000370966 MTHFSDQ2M296 383 aaKnown RBP13.83□□□□□ -0.2
DEPDC1-201ENST00000370966 TSPYL6Q8N831 410 aa13.83□□□□□ -0.2
DEPDC1-201ENST00000370966 PHACTR3Q96KR7 559 aa13.83□□□□□ -0.2
DEPDC1-201ENST00000370966 BCL11BQ9C0K0 894 aaPredicted RBP13.83□□□□□ -0.2
DEPDC1-201ENST00000370966 PHAXQ9H814 394 aaKnown RBP13.83□□□□□ -0.2
DEPDC1-201ENST00000370966 ABCC1P33527 1531 aa13.83□□□□□ -0.2
DEPDC1-201ENST00000370966 GRM8O00222 908 aa13.83□□□□□ -0.2
DEPDC1-201ENST00000370966 GOLIM4O00461 696 aa13.83□□□□□ -0.2
DEPDC1-201ENST00000370966 RBM10P98175 930 aaKnown RBP13.83□□□□□ -0.2
DEPDC1-201ENST00000370966 ODF2Q5BJF6 829 aa13.83□□□□□ -0.2
DEPDC1-201ENST00000370966 UVSSAQ2YD98 709 aa13.82□□□□□ -0.2
DEPDC1-201ENST00000370966 LINS1Q8NG48 757 aa13.82□□□□□ -0.2
DEPDC1-201ENST00000370966 CTCFLQ8NI51 663 aaPredicted RBP13.82□□□□□ -0.2
DEPDC1-201ENST00000370966 TNNQ9UQP3 1299 aa13.82□□□□□ -0.2
DEPDC1-201ENST00000370966 EIF4G3O43432 1585 aaKnown RBP13.82□□□□□ -0.2
DEPDC1-201ENST00000370966 CEP85Q6P2H3 762 aa13.82□□□□□ -0.2
DEPDC1-201ENST00000370966 MINDY4BA8MYZ0 360 aa13.82□□□□□ -0.2
DEPDC1-201ENST00000370966 ATP5J2-PTCD1G3V325 749 aa13.82□□□□□ -0.2
DEPDC1-201ENST00000370966 EXOC5O00471 708 aa13.82□□□□□ -0.2
DEPDC1-201ENST00000370966 SLC12A7Q9Y666 1083 aa13.82□□□□□ -0.2
DEPDC1-201ENST00000370966 DEF6Q9H4E7 631 aa13.81□□□□□ -0.2
DEPDC1-201ENST00000370966 ZRANB1Q9UGI0 708 aa13.81□□□□□ -0.2
DEPDC1-201ENST00000370966 GOLGA8BA8MQT2 603 aa13.81□□□□□ -0.2
DEPDC1-201ENST00000370966 ZSCAN16Q9H4T2 348 aaPredicted RBP13.81□□□□□ -0.2
DEPDC1-201ENST00000370966 CCDC66A2RUB6 948 aa13.81□□□□□ -0.2
DEPDC1-201ENST00000370966 ERLIN1O75477 346 aa13.81□□□□□ -0.2
DEPDC1-201ENST00000370966 ZFYP08048 801 aaPredicted RBP13.81□□□□□ -0.2
DEPDC1-201ENST00000370966 GDPD2Q9HCC8 539 aa13.81□□□□□ -0.2
DEPDC1-201ENST00000370966 ABCA5Q8WWZ7 1642 aa13.81□□□□□ -0.2
DEPDC1-201ENST00000370966 NEMFO60524 1076 aa13.81□□□□□ -0.2
DEPDC1-201ENST00000370966 BICDL1Q6ZP65 573 aa13.81□□□□□ -0.2
DEPDC1-201ENST00000370966 CWC15Q9P013 229 aaKnown RBP13.81□□□□□ -0.2
DEPDC1-201ENST00000370966 USP25Q9UHP3 1055 aa13.81□□□□□ -0.2
DEPDC1-201ENST00000370966 IFIT3O14879 490 aaKnown RBP13.8□□□□□ -0.2
DEPDC1-201ENST00000370966 RRP9O43818 475 aaKnown RBP13.8□□□□□ -0.2
DEPDC1-201ENST00000370966 PDCL2Q8N4E4 241 aa13.8□□□□□ -0.2
DEPDC1-201ENST00000370966 ZSCAN22P10073 491 aaPredicted RBP13.8□□□□□ -0.2
DEPDC1-201ENST00000370966 NOM1Q5C9Z4 860 aaKnown RBP13.8□□□□□ -0.2
DEPDC1-201ENST00000370966 MAST1Q9Y2H9 1570 aa13.8□□□□□ -0.2
DEPDC1-201ENST00000370966 TTC41PQ6P2S7 1318 aa13.8□□□□□ -0.2
DEPDC1-201ENST00000370966 TFIP11Q9UBB9 837 aaKnown RBP13.8□□□□□ -0.2
DEPDC1-201ENST00000370966 COPS6Q7L5N1 327 aa13.8□□□□□ -0.2
DEPDC1-201ENST00000370966 XAGE3Q8WTP9 111 aa13.8□□□□□ -0.2
DEPDC1-201ENST00000370966 PTPN14Q15678 1187 aa13.79□□□□□ -0.2
DEPDC1-201ENST00000370966 FSIP1Q8NA03 581 aa13.79□□□□□ -0.2
DEPDC1-201ENST00000370966 USP16Q9Y5T5 823 aa13.79□□□□□ -0.2
DEPDC1-201ENST00000370966 GOLGA8AA7E2F4 631 aa13.79□□□□□ -0.2
DEPDC1-201ENST00000370966 ZBTB7BO15156 539 aaPredicted RBP13.79□□□□□ -0.2
DEPDC1-201ENST00000370966 EPB41L2O43491 1005 aaKnown RBP13.79□□□□□ -0.2
DEPDC1-201ENST00000370966 ZPR1O75312 459 aa13.79□□□□□ -0.2
DEPDC1-201ENST00000370966 CCT2P78371 535 aaKnown RBP13.79□□□□□ -0.2
DEPDC1-201ENST00000370966 GUCY1B3Q02153 619 aa13.79□□□□□ -0.2
DEPDC1-201ENST00000370966 BABAM1Q9NWV8 329 aa13.79□□□□□ -0.2
DEPDC1-201ENST00000370966 TBX22Q9Y458 520 aa13.79□□□□□ -0.2
DEPDC1-201ENST00000370966 NPHP3Q7Z494 1330 aa13.79□□□□□ -0.2
DEPDC1-201ENST00000370966 SYCP1Q15431 976 aa13.79□□□□□ -0.2
DEPDC1-201ENST00000370966 NCOA7Q8NI08 942 aa13.79□□□□□ -0.2
DEPDC1-201ENST00000370966 EYA1Q99502 592 aa13.79□□□□□ -0.2
DEPDC1-201ENST00000370966 LARP6Q9BRS8 491 aaKnown RBP13.79□□□□□ -0.2
DEPDC1-201ENST00000370966 MKNK2Q9HBH9 465 aa13.79□□□□□ -0.2
DEPDC1-201ENST00000370966 TRPM2O94759 1503 aa13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 ZMYM4Q5VZL5 1548 aa13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 ZSCAN12O43309 604 aa13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 UQCRFS1P1P0C7P4 283 aa13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 PLEKHM2Q8IWE5 1019 aa13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 CKAP2LQ8IYA6 745 aa13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 CDC5LQ99459 802 aaKnown RBP13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 ORC3Q9UBD5 711 aaPredicted RBP13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 GPTP24298 496 aa13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 RDXP35241 583 aaKnown RBP13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 IARSP41252 1262 aaKnown RBP13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 USP5P45974 858 aa13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 ARHGAP29Q52LW3 1261 aa13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 TANGO6Q9C0B7 1094 aa13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 ZHX3Q9H4I2 956 aa13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 SSRP1Q08945 709 aaKnown RBP13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 FAM177A1Q8N128 213 aaPredicted RBP13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 UBXN4Q92575 508 aa13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 RBM8AQ9Y5S9 174 aaKnown RBP13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 SPATA31E1Q6ZUB1 1445 aa13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 IL15P40933 162 aaPredicted RBP13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 ZNF165P49910 485 aa13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 C16orf71Q8IYS4 520 aaPredicted RBP13.78□□□□□ -0.2
DEPDC1-201ENST00000370966 MAP3K5Q99683 1374 aa13.77□□□□□ -0.2
DEPDC1-201ENST00000370966 LRSAM1Q6UWE0 723 aa13.77□□□□□ -0.2
DEPDC1-201ENST00000370966 KIF18AQ8NI77 898 aa13.77□□□□□ -0.2
DEPDC1-201ENST00000370966 MAP3K19Q56UN5 1328 aa13.77□□□□□ -0.2
DEPDC1-201ENST00000370966 RANBP6O60518 1105 aaKnown RBP13.77□□□□□ -0.21
DEPDC1-201ENST00000370966 EIF5P55010 431 aaKnown RBP13.77□□□□□ -0.21
DEPDC1-201ENST00000370966 SNRKQ9NRH2 765 aa13.77□□□□□ -0.21
DEPDC1-201ENST00000370966 CLIP2Q9UDT6 1046 aa13.77□□□□□ -0.21
DEPDC1-201ENST00000370966 GSDMDP57764 484 aa13.77□□□□□ -0.21
DEPDC1-201ENST00000370966 ZSCAN23Q3MJ62 389 aa13.77□□□□□ -0.21
DEPDC1-201ENST00000370966 DZIP1Q86YF9 867 aaKnown RBP13.77□□□□□ -0.21
DEPDC1-201ENST00000370966 EIF3JO75822 258 aaKnown RBP13.76□□□□□ -0.21
DEPDC1-201ENST00000370966 POLR3DP05423 398 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms