RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 CHRNA5P30532 468 aa26.86■■□□□ 1.89
SMNDC1-201ENST00000369592 PRR5LQ6MZQ0 368 aa26.86■■□□□ 1.89
SMNDC1-201ENST00000369592 SETDB2Q96T68 719 aa26.86■■□□□ 1.89
SMNDC1-201ENST00000369592 MRS2Q9HD23 443 aa26.86■■□□□ 1.89
SMNDC1-201ENST00000369592 ERVV-1B6SEH8 477 aa26.85■■□□□ 1.89
SMNDC1-201ENST00000369592 HLFQ16534 295 aa26.85■■□□□ 1.89
SMNDC1-201ENST00000369592 KRT24Q2M2I5 525 aa26.85■■□□□ 1.89
SMNDC1-201ENST00000369592 PIM2Q9P1W9 311 aa26.85■■□□□ 1.89
SMNDC1-201ENST00000369592 ADCY9O60503 1353 aa26.84■■□□□ 1.89
SMNDC1-201ENST00000369592 NCBP3Q53F19 620 aaKnown RBP26.84■■□□□ 1.89
SMNDC1-201ENST00000369592 TTLL7Q6ZT98 887 aa26.84■■□□□ 1.89
SMNDC1-201ENST00000369592 ZNF652Q9Y2D9 606 aa26.84■■□□□ 1.89
SMNDC1-201ENST00000369592 BCS1LQ9Y276 419 aa26.83■■□□□ 1.89
SMNDC1-201ENST00000369592 MAP3K15Q6ZN16 1313 aa26.83■■□□□ 1.89
SMNDC1-201ENST00000369592 HOXB7P09629 217 aa26.82■■□□□ 1.88
SMNDC1-201ENST00000369592 CCDC27Q2M243 656 aa26.82■■□□□ 1.88
SMNDC1-201ENST00000369592 PROSER3Q2NL68 480 aa26.82■■□□□ 1.88
SMNDC1-201ENST00000369592 BRIP1Q9BX63 1249 aa26.82■■□□□ 1.88
SMNDC1-201ENST00000369592 MBIPQ9NS73 344 aa26.82■■□□□ 1.88
SMNDC1-201ENST00000369592 IFT57Q9NWB7 429 aa26.82■■□□□ 1.88
SMNDC1-201ENST00000369592 LAS1LQ9Y4W2 734 aaKnown RBP26.81■■□□□ 1.88
SMNDC1-201ENST00000369592 COL11A2P13942 1736 aaPredicted RBP26.81■■□□□ 1.88
SMNDC1-201ENST00000369592 MYL6BP14649 208 aa26.8■■□□□ 1.88
SMNDC1-201ENST00000369592 EIF2S2P20042 333 aaKnown RBP26.79■■□□□ 1.88
SMNDC1-201ENST00000369592 DALRD3Q5D0E6 543 aaKnown RBP26.79■■□□□ 1.88
SMNDC1-201ENST00000369592 CALD1Q05682 793 aaKnown RBP26.78■■□□□ 1.88
SMNDC1-201ENST00000369592 NGEFQ8N5V2 710 aa26.78■■□□□ 1.88
SMNDC1-201ENST00000369592 CNBD1Q8NA66 436 aa26.78■■□□□ 1.88
SMNDC1-201ENST00000369592 PDZRN3Q9UPQ7 1066 aa26.78■■□□□ 1.88
SMNDC1-201ENST00000369592 NIP7Q9Y221 180 aaKnown RBP eCLIP26.78■■□□□ 1.88
SMNDC1-201ENST00000369592 GNAI1P63096 354 aa26.77■■□□□ 1.88
SMNDC1-201ENST00000369592 C2CD5Q86YS7 1000 aa26.77■■□□□ 1.88
SMNDC1-201ENST00000369592 CCDC24Q8N4L8 307 aa26.77■■□□□ 1.88
SMNDC1-201ENST00000369592 KLRG2A4D1S0 409 aaPredicted RBP26.76■■□□□ 1.87
SMNDC1-201ENST00000369592 ANXA1P04083 346 aa26.76■■□□□ 1.87
SMNDC1-201ENST00000369592 DDX21Q9NR30 783 aaKnown RBP eCLIP26.76■■□□□ 1.87
SMNDC1-201ENST00000369592 PDE6BP35913 854 aa26.75■■□□□ 1.87
SMNDC1-201ENST00000369592 GIGYF2Q6Y7W6 1299 aaKnown RBP26.75■■□□□ 1.87
SMNDC1-201ENST00000369592 KIF6Q6ZMV9 814 aa26.75■■□□□ 1.87
SMNDC1-201ENST00000369592 WWC1Q8IX03 1113 aa26.75■■□□□ 1.87
SMNDC1-201ENST00000369592 ZNF34Q8IZ26 560 aa26.75■■□□□ 1.87
SMNDC1-201ENST00000369592 H0YIN7 160 aa26.74■■□□□ 1.87
SMNDC1-201ENST00000369592 DUSP27Q5VZP5 1158 aa26.74■■□□□ 1.87
SMNDC1-201ENST00000369592 NBPF5PQ86XG9 351 aaPredicted RBP26.74■■□□□ 1.87
SMNDC1-201ENST00000369592 SBF1O95248 1867 aa26.74■■□□□ 1.87
SMNDC1-201ENST00000369592 ZBTB3Q9H5J0 574 aa26.73■■□□□ 1.87
SMNDC1-201ENST00000369592 IBTKQ9P2D0 1353 aaPredicted RBP26.72■■□□□ 1.87
SMNDC1-201ENST00000369592 UBN2Q6ZU65 1347 aa26.72■■□□□ 1.87
SMNDC1-201ENST00000369592 ARFGEF2Q9Y6D5 1785 aa26.72■■□□□ 1.87
SMNDC1-201ENST00000369592 ST5P78524 1137 aa26.72■■□□□ 1.87
SMNDC1-201ENST00000369592 TPTE2Q6XPS3 522 aa26.72■■□□□ 1.87
SMNDC1-201ENST00000369592 TTLL6Q8N841 843 aa26.72■■□□□ 1.87
SMNDC1-201ENST00000369592 NECTIN2Q92692 538 aa26.72■■□□□ 1.87
SMNDC1-201ENST00000369592 SRGNP10124 158 aa26.71■■□□□ 1.87
SMNDC1-201ENST00000369592 HDGFL1Q5TGJ6 251 aa26.71■■□□□ 1.87
SMNDC1-201ENST00000369592 ARHGAP27Q6ZUM4 889 aa26.71■■□□□ 1.87
SMNDC1-201ENST00000369592 CHPF2Q9P2E5 772 aa26.71■■□□□ 1.87
SMNDC1-201ENST00000369592 ANKRD36CQ5JPF3 1778 aa26.71■■□□□ 1.87
SMNDC1-201ENST00000369592 COPS6Q7L5N1 327 aa26.7■■□□□ 1.86
SMNDC1-201ENST00000369592 XAGE3Q8WTP9 111 aa26.7■■□□□ 1.86
SMNDC1-201ENST00000369592 SLX4Q8IY92 1834 aa26.69■■□□□ 1.86
SMNDC1-201ENST00000369592 IL16Q14005 1332 aa26.69■■□□□ 1.86
SMNDC1-201ENST00000369592 C8orf58Q8NAV2 365 aa26.69■■□□□ 1.86
SMNDC1-201ENST00000369592 RIC1Q4ADV7 1423 aa26.68■■□□□ 1.86
SMNDC1-201ENST00000369592 STYK1Q6J9G0 422 aa26.68■■□□□ 1.86
SMNDC1-201ENST00000369592 DBF4Q9UBU7 674 aaPredicted RBP26.68■■□□□ 1.86
SMNDC1-201ENST00000369592 TNRC6CQ9HCJ0 1690 aaKnown RBP26.68■■□□□ 1.86
SMNDC1-201ENST00000369592 KIF3CO14782 793 aa26.67■■□□□ 1.86
SMNDC1-201ENST00000369592 SUSD4Q5VX71 490 aa26.67■■□□□ 1.86
SMNDC1-201ENST00000369592 ABCC12Q96J65 1359 aa26.67■■□□□ 1.86
SMNDC1-201ENST00000369592 MASTLQ96GX5 879 aa26.66■■□□□ 1.86
SMNDC1-201ENST00000369592 NYXQ9GZU5 481 aa26.66■■□□□ 1.86
SMNDC1-201ENST00000369592 FER1L6Q2WGJ9 1857 aa26.66■■□□□ 1.86
SMNDC1-201ENST00000369592 NTSR2O95665 410 aa26.65■■□□□ 1.86
SMNDC1-201ENST00000369592 GPTP24298 496 aa26.65■■□□□ 1.86
SMNDC1-201ENST00000369592 FAM177BA6PVY3 158 aa26.64■■□□□ 1.86
SMNDC1-201ENST00000369592 CRY2Q49AN0 593 aa26.64■■□□□ 1.86
SMNDC1-201ENST00000369592 ZNF622Q969S3 477 aaKnown RBP eCLIP26.64■■□□□ 1.864e-9■□□□□ 9.3
SMNDC1-201ENST00000369592 CACNA1SQ13698 1873 aa26.64■■□□□ 1.85
SMNDC1-201ENST00000369592 NPHP1O15259 732 aa26.63■■□□□ 1.85
SMNDC1-201ENST00000369592 APLP1P51693 650 aa26.63■■□□□ 1.85
SMNDC1-201ENST00000369592 PARP10Q53GL7 1025 aa26.63■■□□□ 1.85
SMNDC1-201ENST00000369592 TSPYL6Q8N831 410 aa26.63■■□□□ 1.85
SMNDC1-201ENST00000369592 TSR2Q969E8 191 aaKnown RBP26.63■■□□□ 1.85
SMNDC1-201ENST00000369592 CNKSR1Q969H4 720 aa26.63■■□□□ 1.85
SMNDC1-201ENST00000369592 HYPKQ9NX55 129 aa26.63■■□□□ 1.85
SMNDC1-201ENST00000369592 ELL2O00472 640 aaPredicted RBP26.62■■□□□ 1.85
SMNDC1-201ENST00000369592 PRELPP51888 382 aa26.62■■□□□ 1.85
SMNDC1-201ENST00000369592 AIMP1Q12904 312 aaKnown RBP26.62■■□□□ 1.85
SMNDC1-201ENST00000369592 TCIRG1Q13488 830 aa26.62■■□□□ 1.85
SMNDC1-201ENST00000369592 ERFEQ4G0M1 354 aa26.62■■□□□ 1.85
SMNDC1-201ENST00000369592 NUTM1Q86Y26 1132 aa26.62■■□□□ 1.85
SMNDC1-201ENST00000369592 WDR63Q8IWG1 891 aa26.62■■□□□ 1.85
SMNDC1-201ENST00000369592 C7orf43Q8WVR3 580 aa26.62■■□□□ 1.85
SMNDC1-201ENST00000369592 NPR1P16066 1061 aa26.61■■□□□ 1.85
SMNDC1-201ENST00000369592 FAM9BQ8IZU0 186 aa26.61■■□□□ 1.85
SMNDC1-201ENST00000369592 PLBD2Q8NHP8 589 aa26.61■■□□□ 1.85
SMNDC1-201ENST00000369592 CCDC88AQ3V6T2 1871 aa26.61■■□□□ 1.85
SMNDC1-201ENST00000369592 NFKBIEO00221 500 aa26.6■■□□□ 1.85
SMNDC1-201ENST00000369592 HSP90AB3PQ58FF7 597 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms