RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 BRPF3Q9ULD4 1205 aa12.37□□□□□ -0.43
TPM3-209ENST00000368527 PARP4Q9UKK3 1724 aaKnown RBP12.37□□□□□ -0.43
TPM3-209ENST00000368527 KCNQ3O43525 872 aa12.36□□□□□ -0.43
TPM3-209ENST00000368527 RIC3Q7Z5B4 369 aa12.36□□□□□ -0.43
TPM3-209ENST00000368527 TMX3Q96JJ7 454 aa12.36□□□□□ -0.43
TPM3-209ENST00000368527 TM6SF1Q9BZW5 370 aa12.36□□□□□ -0.43
TPM3-209ENST00000368527 IL1RAPL2Q9NP60 686 aa12.36□□□□□ -0.43
TPM3-209ENST00000368527 DIAPH3Q9NSV4 1193 aa12.36□□□□□ -0.43
TPM3-209ENST00000368527 AXIN2Q9Y2T1 843 aa12.36□□□□□ -0.43
TPM3-209ENST00000368527 DDX49Q9Y6V7 483 aaKnown RBP12.36□□□□□ -0.43
TPM3-209ENST00000368527 PKD1L3Q7Z443 1732 aa12.36□□□□□ -0.43
TPM3-209ENST00000368527 COL18A1P39060 1754 aa12.35□□□□□ -0.43
TPM3-209ENST00000368527 RFX7Q2KHR2 1363 aa12.35□□□□□ -0.43
TPM3-209ENST00000368527 PLEKHG5O94827 1062 aa12.35□□□□□ -0.43
TPM3-209ENST00000368527 XRCC6P12956 609 aaKnown RBP eCLIP12.35□□□□□ -0.439e-13■□□□□ 8.6
TPM3-209ENST00000368527 KCNA4P22459 653 aa12.35□□□□□ -0.43
TPM3-209ENST00000368527 HSPA2P54652 639 aa12.35□□□□□ -0.43
TPM3-209ENST00000368527 ZNF445P59923 1031 aa12.35□□□□□ -0.43
TPM3-209ENST00000368527 RBM33Q96EV2 1170 aaKnown RBP12.35□□□□□ -0.43
TPM3-209ENST00000368527 ZSCAN31Q96LW9 406 aaPredicted RBP12.35□□□□□ -0.43
TPM3-209ENST00000368527 METTL22Q9BUU2 404 aaPredicted RBP12.35□□□□□ -0.43
TPM3-209ENST00000368527 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.35□□□□□ -0.43
TPM3-209ENST00000368527 SPATA31A3Q5VYP0 1347 aa12.35□□□□□ -0.43
TPM3-209ENST00000368527 WDR33Q9C0J8 1336 aaKnown RBP12.35□□□□□ -0.43
TPM3-209ENST00000368527 CSB-PGBD3P0DP91 1061 aa12.34□□□□□ -0.43
TPM3-209ENST00000368527 XPCQ01831 940 aaPredicted RBP12.34□□□□□ -0.43
TPM3-209ENST00000368527 NUTM1Q86Y26 1132 aa12.34□□□□□ -0.43
TPM3-209ENST00000368527 SYAP1Q96A49 352 aaPredicted RBP12.34□□□□□ -0.43
TPM3-209ENST00000368527 GZF1Q9H116 711 aaPredicted RBP12.34□□□□□ -0.43
TPM3-209ENST00000368527 SNRKQ9NRH2 765 aa12.34□□□□□ -0.43
TPM3-209ENST00000368527 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
TPM3-209ENST00000368527 KDM6AO15550 1401 aaPredicted RBP12.34□□□□□ -0.43
TPM3-209ENST00000368527 BRD1O95696 1058 aa12.33□□□□□ -0.44
TPM3-209ENST00000368527 ZC3H6P61129 1189 aaKnown RBP12.33□□□□□ -0.44
TPM3-209ENST00000368527 PDIA6Q15084 440 aa12.33□□□□□ -0.44
TPM3-209ENST00000368527 FBXO41Q8TF61 875 aa12.33□□□□□ -0.44
TPM3-209ENST00000368527 KCNB2Q92953 911 aa12.33□□□□□ -0.44
TPM3-209ENST00000368527 SH2B1Q9NRF2 756 aaPredicted RBP12.33□□□□□ -0.44
TPM3-209ENST00000368527 ATP6V1DQ9Y5K8 247 aa12.33□□□□□ -0.44
TPM3-209ENST00000368527 AK9Q5TCS8 1911 aa12.33□□□□□ -0.44
TPM3-209ENST00000368527 NEURL1BA8MQ27 555 aa12.32□□□□□ -0.44
TPM3-209ENST00000368527 ERVV-2B6SEH9 535 aa12.32□□□□□ -0.44
TPM3-209ENST00000368527 ZKSCAN1P17029 563 aaPredicted RBP12.32□□□□□ -0.44
TPM3-209ENST00000368527 NCLP19338 710 aaKnown RBP12.32□□□□□ -0.44
TPM3-209ENST00000368527 PSMA5P28066 241 aa12.32□□□□□ -0.44
TPM3-209ENST00000368527 GCKRQ14397 625 aa12.32□□□□□ -0.44
TPM3-209ENST00000368527 CSPP1Q1MSJ5 1256 aa12.32□□□□□ -0.44
TPM3-209ENST00000368527 RNF20Q5VTR2 975 aa12.32□□□□□ -0.44
TPM3-209ENST00000368527 MCTP1Q6DN14 999 aa12.32□□□□□ -0.44
TPM3-209ENST00000368527 LSG1Q9H089 658 aaKnown RBP12.32□□□□□ -0.44
TPM3-209ENST00000368527 COPRSQ9NQ92 184 aa12.32□□□□□ -0.44
TPM3-209ENST00000368527 LMBRD1Q9NUN5 540 aa12.32□□□□□ -0.44
TPM3-209ENST00000368527 LIMCH1Q9UPQ0 1083 aa12.32□□□□□ -0.44
TPM3-209ENST00000368527 PCDH11XQ9BZA7 1347 aa12.32□□□□□ -0.44
TPM3-209ENST00000368527 PCDH11YQ9BZA8 1340 aa12.32□□□□□ -0.44
TPM3-209ENST00000368527 PHF14O94880 888 aa12.31□□□□□ -0.44
TPM3-209ENST00000368527 CABP4P57796 275 aa12.31□□□□□ -0.44
TPM3-209ENST00000368527 CCDC173Q0VFZ6 552 aa12.31□□□□□ -0.44
TPM3-209ENST00000368527 ANKRD1Q15327 319 aa12.31□□□□□ -0.44
TPM3-209ENST00000368527 VPS53Q5VIR6 699 aa12.31□□□□□ -0.44
TPM3-209ENST00000368527 TSHZ3Q63HK5 1081 aa12.31□□□□□ -0.44
TPM3-209ENST00000368527 ANKRD13DQ6ZTN6 518 aa12.31□□□□□ -0.44
TPM3-209ENST00000368527 MEGF6O75095 1541 aa12.31□□□□□ -0.44
TPM3-209ENST00000368527 LAMB4A4D0S4 1761 aa12.3□□□□□ -0.44
TPM3-209ENST00000368527 PROSER3Q2NL68 480 aa12.3□□□□□ -0.44
TPM3-209ENST00000368527 AACSQ86V21 672 aa12.3□□□□□ -0.44
TPM3-209ENST00000368527 UNC5CLQ8IV45 518 aa12.3□□□□□ -0.44
TPM3-209ENST00000368527 PLBD2Q8NHP8 589 aa12.3□□□□□ -0.44
TPM3-209ENST00000368527 SUCLG2Q96I99 432 aa12.3□□□□□ -0.44
TPM3-209ENST00000368527 ALDH8A1Q9H2A2 487 aaPredicted RBP12.3□□□□□ -0.44
TPM3-209ENST00000368527 BICC1Q9H694 974 aaKnown RBP12.3□□□□□ -0.44
TPM3-209ENST00000368527 HMG20BQ9P0W2 317 aa12.3□□□□□ -0.44
TPM3-209ENST00000368527 SNX14Q9Y5W7 946 aa12.3□□□□□ -0.44
TPM3-209ENST00000368527 RGPD5Q99666 1765 aa12.29□□□□□ -0.44
TPM3-209ENST00000368527 ANXA1P04083 346 aa12.29□□□□□ -0.44
TPM3-209ENST00000368527 KRT32Q14532 448 aa12.29□□□□□ -0.44
TPM3-209ENST00000368527 CWF19L2Q2TBE0 894 aaKnown RBP12.29□□□□□ -0.44
TPM3-209ENST00000368527 RABL6Q3YEC7 729 aaPredicted RBP12.29□□□□□ -0.44
TPM3-209ENST00000368527 ZGPATQ8N5A5 531 aaKnown RBP12.29□□□□□ -0.44
TPM3-209ENST00000368527 NFATC2IPQ8NCF5 419 aa12.29□□□□□ -0.44
TPM3-209ENST00000368527 XAGE3Q8WTP9 111 aa12.29□□□□□ -0.44
TPM3-209ENST00000368527 TRIM44Q96DX7 344 aaPredicted RBP12.29□□□□□ -0.44
TPM3-209ENST00000368527 PALD1Q9ULE6 856 aa12.29□□□□□ -0.44
TPM3-209ENST00000368527 CYP46A1Q9Y6A2 500 aa12.29□□□□□ -0.44
TPM3-209ENST00000368527 WDR17Q8IZU2 1322 aa12.29□□□□□ -0.44
TPM3-209ENST00000368527 LETM1O95202 739 aaPredicted RBP12.28□□□□□ -0.44
TPM3-209ENST00000368527 IGKV5-2P06315 115 aa12.28□□□□□ -0.44
TPM3-209ENST00000368527 NKX1-1Q15270 411 aaPredicted RBP12.28□□□□□ -0.44
TPM3-209ENST00000368527 HS1BP3Q53T59 392 aa12.28□□□□□ -0.44
TPM3-209ENST00000368527 COPS6Q7L5N1 327 aa12.28□□□□□ -0.44
TPM3-209ENST00000368527 CHMP4CQ96CF2 233 aa12.28□□□□□ -0.44
TPM3-209ENST00000368527 ZNF496Q96IT1 587 aaPredicted RBP12.28□□□□□ -0.44
TPM3-209ENST00000368527 TTC14Q96N46 770 aa12.28□□□□□ -0.44
TPM3-209ENST00000368527 GPR108Q9NPR9 543 aa12.28□□□□□ -0.44
TPM3-209ENST00000368527 CCDC171Q6TFL3 1326 aa12.28□□□□□ -0.44
TPM3-209ENST00000368527 C5P01031 1676 aa12.27□□□□□ -0.45
TPM3-209ENST00000368527 ATP5JP18859 108 aa12.27□□□□□ -0.45
TPM3-209ENST00000368527 PDCP20941 246 aa12.27□□□□□ -0.45
TPM3-209ENST00000368527 AIMP1Q12904 312 aaKnown RBP12.27□□□□□ -0.45
TPM3-209ENST00000368527 CWC27Q6UX04 472 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms