RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 GOLIM4O00461 696 aa13.71□□□□□ -0.22
COPA-202ENST00000368069 GNL3LQ9NVN8 582 aaKnown RBP13.71□□□□□ -0.22
COPA-202ENST00000368069 RBM8AQ9Y5S9 174 aaKnown RBP13.71□□□□□ -0.22
COPA-202ENST00000368069 PA2G4Q9UQ80 394 aaKnown RBP13.7□□□□□ -0.22
COPA-202ENST00000368069 UVSSAQ2YD98 709 aa13.7□□□□□ -0.22
COPA-202ENST00000368069 AIDAQ96BJ3 306 aa13.7□□□□□ -0.22
COPA-202ENST00000368069 ANO10Q9NW15 660 aa13.7□□□□□ -0.22
COPA-202ENST00000368069 MAP3K5Q99683 1374 aa13.7□□□□□ -0.22
COPA-202ENST00000368069 CHL1O00533 1208 aa13.7□□□□□ -0.22
COPA-202ENST00000368069 C8orf76Q96K31 380 aa13.7□□□□□ -0.22
COPA-202ENST00000368069 NEK1Q96PY6 1258 aa13.7□□□□□ -0.22
COPA-202ENST00000368069 SOS1Q07889 1333 aaPredicted RBP13.7□□□□□ -0.22
COPA-202ENST00000368069 CBFA2T2O43439 604 aa13.7□□□□□ -0.22
COPA-202ENST00000368069 ALDH1L1O75891 902 aa13.7□□□□□ -0.22
COPA-202ENST00000368069 KRT28Q7Z3Y7 464 aa13.7□□□□□ -0.22
COPA-202ENST00000368069 HMG20BQ9P0W2 317 aa13.7□□□□□ -0.22
COPA-202ENST00000368069 PDE4CQ08493 712 aa13.69□□□□□ -0.22
COPA-202ENST00000368069 ZBTB3Q9H5J0 574 aa13.69□□□□□ -0.22
COPA-202ENST00000368069 PHAXQ9H814 394 aaKnown RBP13.69□□□□□ -0.22
COPA-202ENST00000368069 CLIP2Q9UDT6 1046 aa13.69□□□□□ -0.22
COPA-202ENST00000368069 DACH1Q9UI36 760 aa13.69□□□□□ -0.22
COPA-202ENST00000368069 KSR2Q6VAB6 950 aa13.69□□□□□ -0.22
COPA-202ENST00000368069 FAM177A1Q8N128 213 aaPredicted RBP13.69□□□□□ -0.22
COPA-202ENST00000368069 SMTNL1A8MU46 457 aa13.69□□□□□ -0.22
COPA-202ENST00000368069 GRM8O00222 908 aa13.69□□□□□ -0.22
COPA-202ENST00000368069 SLC3A2P08195 630 aaKnown RBP13.69□□□□□ -0.22
COPA-202ENST00000368069 TXLNAP40222 546 aa13.69□□□□□ -0.22
COPA-202ENST00000368069 IFNL2Q8IZJ0 200 aa13.69□□□□□ -0.22
COPA-202ENST00000368069 PPFIA3O75145 1194 aa13.68□□□□□ -0.22
COPA-202ENST00000368069 AKAP4Q5JQC9 854 aa13.68□□□□□ -0.22
COPA-202ENST00000368069 UBAC1Q9BSL1 405 aa13.68□□□□□ -0.22
COPA-202ENST00000368069 STARD3NLO95772 234 aa13.68□□□□□ -0.22
COPA-202ENST00000368069 F13A1P00488 732 aa13.68□□□□□ -0.22
COPA-202ENST00000368069 AK2P54819 239 aa13.68□□□□□ -0.22
COPA-202ENST00000368069 PDCL2Q8N4E4 241 aa13.68□□□□□ -0.22
COPA-202ENST00000368069 SMARCE1Q969G3 411 aa13.68□□□□□ -0.22
COPA-202ENST00000368069 LRRC59Q96AG4 307 aaKnown RBP13.68□□□□□ -0.22
COPA-202ENST00000368069 ANKRD13DQ6ZTN6 518 aa13.68□□□□□ -0.22
COPA-202ENST00000368069 DDX46Q7L014 1031 aaKnown RBP13.68□□□□□ -0.22
COPA-202ENST00000368069 FSIP1Q8NA03 581 aa13.68□□□□□ -0.22
COPA-202ENST00000368069 XAGE3Q8WTP9 111 aa13.68□□□□□ -0.22
COPA-202ENST00000368069 TRIM34Q9BYJ4 488 aa13.68□□□□□ -0.22
COPA-202ENST00000368069 SLC39A6Q13433 755 aa13.67□□□□□ -0.22
COPA-202ENST00000368069 MYOM2P54296 1465 aa13.67□□□□□ -0.22
COPA-202ENST00000368069 IFIT5Q13325 482 aaKnown RBP13.67□□□□□ -0.22
COPA-202ENST00000368069 PLEKHF1Q96S99 279 aa13.67□□□□□ -0.22
COPA-202ENST00000368069 SNRKQ9NRH2 765 aa13.67□□□□□ -0.22
COPA-202ENST00000368069 GOLGA8BA8MQT2 603 aa13.67□□□□□ -0.22
COPA-202ENST00000368069 CTAGE5O15320 804 aa13.67□□□□□ -0.22
COPA-202ENST00000368069 DNM1Q05193 864 aaKnown RBP13.67□□□□□ -0.22
COPA-202ENST00000368069 PPFIBP1Q86W92 1011 aa13.67□□□□□ -0.22
COPA-202ENST00000368069 INTS4Q96HW7 963 aaKnown RBP13.67□□□□□ -0.22
COPA-202ENST00000368069 TMOD3Q9NYL9 352 aa13.67□□□□□ -0.22
COPA-202ENST00000368069 SNRPA1P09661 255 aaKnown RBP13.67□□□□□ -0.22
COPA-202ENST00000368069 HSP90B2PQ58FF3 399 aa13.67□□□□□ -0.22
COPA-202ENST00000368069 BRF1Q92994 677 aa13.67□□□□□ -0.22
COPA-202ENST00000368069 ZNF830Q96NB3 372 aaPredicted RBP13.67□□□□□ -0.22
COPA-202ENST00000368069 LRP2BPQ9P2M1 347 aa13.67□□□□□ -0.22
COPA-202ENST00000368069 ZMYM3Q14202 1370 aa13.67□□□□□ -0.22
COPA-202ENST00000368069 CDC42BPAQ5VT25 1732 aa13.67□□□□□ -0.22
COPA-202ENST00000368069 ABCC4O15439 1325 aa13.67□□□□□ -0.22
COPA-202ENST00000368069 TTC41PQ6P2S7 1318 aa13.67□□□□□ -0.22
COPA-202ENST00000368069 HOXC9P31274 260 aa13.66□□□□□ -0.22
COPA-202ENST00000368069 ZNF165P49910 485 aa13.66□□□□□ -0.22
COPA-202ENST00000368069 NAP1L1P55209 391 aaKnown RBP13.66□□□□□ -0.22
COPA-202ENST00000368069 NMIQ13287 307 aaPredicted RBP13.66□□□□□ -0.22
COPA-202ENST00000368069 CFAP100Q494V2 611 aa13.66□□□□□ -0.22
COPA-202ENST00000368069 COPS6Q7L5N1 327 aa13.66□□□□□ -0.22
COPA-202ENST00000368069 RRAGDQ9NQL2 400 aaPredicted RBP13.66□□□□□ -0.22
COPA-202ENST00000368069 CWF19L2Q2TBE0 894 aaKnown RBP13.66□□□□□ -0.22
COPA-202ENST00000368069 SFPQP23246 707 aaKnown RBP eCLIP13.66□□□□□ -0.22
COPA-202ENST00000368069 WASF1Q92558 559 aa13.66□□□□□ -0.22
COPA-202ENST00000368069 LRRC2Q9BYS8 371 aa13.66□□□□□ -0.22
COPA-202ENST00000368069 RAI14Q9P0K7 980 aa13.66□□□□□ -0.22
COPA-202ENST00000368069 ZNF213O14771 459 aa13.66□□□□□ -0.22
COPA-202ENST00000368069 PTPN14Q15678 1187 aa13.66□□□□□ -0.22
COPA-202ENST00000368069 CEP89Q96ST8 783 aa13.66□□□□□ -0.22
COPA-202ENST00000368069 ACBD3Q9H3P7 528 aa13.66□□□□□ -0.22
COPA-202ENST00000368069 CWC25Q9NXE8 425 aaPredicted RBP13.66□□□□□ -0.22
COPA-202ENST00000368069 PIP4K2AP48426 406 aaPredicted RBP13.65□□□□□ -0.22
COPA-202ENST00000368069 C16orf45Q96MC5 204 aaPredicted RBP13.65□□□□□ -0.22
COPA-202ENST00000368069 NOL7Q9UMY1 257 aaKnown RBP13.65□□□□□ -0.22
COPA-202ENST00000368069 HAND2P61296 217 aa13.65□□□□□ -0.22
COPA-202ENST00000368069 ZKSCAN5Q9Y2L8 839 aa13.65□□□□□ -0.22
COPA-202ENST00000368069 TRPM1Q7Z4N2 1603 aa13.65□□□□□ -0.22
COPA-202ENST00000368069 LINS1Q8NG48 757 aa13.65□□□□□ -0.22
COPA-202ENST00000368069 CAGE1Q8TC20 777 aa13.65□□□□□ -0.22
COPA-202ENST00000368069 CCAR1Q8IX12 1150 aaKnown RBP13.64□□□□□ -0.23
COPA-202ENST00000368069 MAGEC2Q9UBF1 373 aaPredicted RBP13.64□□□□□ -0.23
COPA-202ENST00000368069 CHRNA2Q15822 529 aa13.64□□□□□ -0.23
COPA-202ENST00000368069 GSPT1P15170 499 aaKnown RBP13.64□□□□□ -0.23
COPA-202ENST00000368069 STX1AQ16623 288 aa13.64□□□□□ -0.23
COPA-202ENST00000368069 NAPBQ9H115 298 aa13.64□□□□□ -0.23
COPA-202ENST00000368069 ABCF2Q9UG63 623 aa13.64□□□□□ -0.23
COPA-202ENST00000368069 TNNT1P13805 278 aa13.64□□□□□ -0.23
COPA-202ENST00000368069 IGHMBP2P38935 993 aaKnown RBP13.64□□□□□ -0.23
COPA-202ENST00000368069 PDCL3Q9H2J4 239 aa13.64□□□□□ -0.23
COPA-202ENST00000368069 RAB11FIP4Q86YS3 637 aa13.63□□□□□ -0.23
COPA-202ENST00000368069 USP16Q9Y5T5 823 aa13.63□□□□□ -0.23
COPA-202ENST00000368069 ADCY10Q96PN6 1610 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms