RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 LRP10Q7Z4F1 713 aa12.82□□□□□ -0.36
SMC3-201ENST00000361804 CUL4AQ13619 759 aa12.82□□□□□ -0.36
SMC3-201ENST00000361804 CCDC30Q5VVM6 783 aa12.82□□□□□ -0.36
SMC3-201ENST00000361804 ANKLE2Q86XL3 938 aa12.82□□□□□ -0.36
SMC3-201ENST00000361804 SRCIN1Q9C0H9 1055 aa12.82□□□□□ -0.36
SMC3-201ENST00000361804 SRGAP3O43295 1099 aa12.82□□□□□ -0.36
SMC3-201ENST00000361804 FAM177BA6PVY3 158 aa12.81□□□□□ -0.36
SMC3-201ENST00000361804 GNAT3A8MTJ3 354 aa12.81□□□□□ -0.36
SMC3-201ENST00000361804 PLCB2Q00722 1185 aa12.81□□□□□ -0.36
SMC3-201ENST00000361804 ZMYND15Q9H091 742 aa12.81□□□□□ -0.36
SMC3-201ENST00000361804 PTMAP06454 111 aaKnown RBP12.81□□□□□ -0.36
SMC3-201ENST00000361804 AFDNP55196 1824 aaKnown RBP12.81□□□□□ -0.36
SMC3-201ENST00000361804 FIBPO43427 364 aa12.81□□□□□ -0.36
SMC3-201ENST00000361804 GNAI3P08754 354 aa12.81□□□□□ -0.36
SMC3-201ENST00000361804 MCCP23508 829 aa12.81□□□□□ -0.36
SMC3-201ENST00000361804 USP25Q9UHP3 1055 aa12.81□□□□□ -0.36
SMC3-201ENST00000361804 CHMP3Q9Y3E7 222 aa12.81□□□□□ -0.36
SMC3-201ENST00000361804 ZKSCAN5Q9Y2L8 839 aa12.81□□□□□ -0.36
SMC3-201ENST00000361804 AK2P54819 239 aa12.8□□□□□ -0.36
SMC3-201ENST00000361804 PA2G4Q9UQ80 394 aaKnown RBP12.8□□□□□ -0.36
SMC3-201ENST00000361804 UQCRHLA0A096LP55 91 aa12.8□□□□□ -0.36
SMC3-201ENST00000361804 UQCRHP07919 91 aa12.8□□□□□ -0.36
SMC3-201ENST00000361804 EIF4A1P60842 406 aaKnown RBP12.8□□□□□ -0.36
SMC3-201ENST00000361804 PI4K2BQ8TCG2 481 aa12.8□□□□□ -0.36
SMC3-201ENST00000361804 CHPF2Q9P2E5 772 aa12.8□□□□□ -0.36
SMC3-201ENST00000361804 SNX14Q9Y5W7 946 aa12.8□□□□□ -0.36
SMC3-201ENST00000361804 RPAP1Q9BWH6 1393 aaPredicted RBP12.8□□□□□ -0.36
SMC3-201ENST00000361804 TAF7Q15545 349 aaPredicted RBP12.8□□□□□ -0.36
SMC3-201ENST00000361804 PROSER3Q2NL68 480 aa12.8□□□□□ -0.36
SMC3-201ENST00000361804 TCEANC2Q96MN5 208 aa12.8□□□□□ -0.36
SMC3-201ENST00000361804 TSPY26PQ9H489 355 aa12.8□□□□□ -0.36
SMC3-201ENST00000361804 OVOS2A0A0G2JMS6 1433 aa12.8□□□□□ -0.36
SMC3-201ENST00000361804 NHSL1Q5SYE7 1610 aa12.8□□□□□ -0.36
SMC3-201ENST00000361804 HCLS1P14317 486 aaPredicted RBP12.79□□□□□ -0.36
SMC3-201ENST00000361804 PDIA6Q15084 440 aa12.79□□□□□ -0.36
SMC3-201ENST00000361804 ADCK5Q3MIX3 580 aa12.79□□□□□ -0.36
SMC3-201ENST00000361804 RHPN1Q8TCX5 695 aa12.79□□□□□ -0.36
SMC3-201ENST00000361804 PI4KAP2A4QPH2 592 aa12.79□□□□□ -0.36
SMC3-201ENST00000361804 GCP02774 474 aa12.79□□□□□ -0.36
SMC3-201ENST00000361804 RUFY3Q7L099 469 aa12.79□□□□□ -0.36
SMC3-201ENST00000361804 PI4KAP1Q8N8J0 262 aa12.79□□□□□ -0.36
SMC3-201ENST00000361804 TTC12Q9H892 705 aaPredicted RBP12.79□□□□□ -0.36
SMC3-201ENST00000361804 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMC3-201ENST00000361804 HTATSF1O43719 755 aaKnown RBP12.79□□□□□ -0.36
SMC3-201ENST00000361804 TPM2P07951 284 aa12.79□□□□□ -0.36
SMC3-201ENST00000361804 PTH1RQ03431 593 aa12.78□□□□□ -0.36
SMC3-201ENST00000361804 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.78□□□□□ -0.36
SMC3-201ENST00000361804 HSPA4P34932 840 aa12.78□□□□□ -0.36
SMC3-201ENST00000361804 ESCO1Q5FWF5 840 aa12.78□□□□□ -0.36
SMC3-201ENST00000361804 FAM173BQ6P4H8 233 aa12.78□□□□□ -0.36
SMC3-201ENST00000361804 KAZALD1Q96I82 304 aa12.78□□□□□ -0.36
SMC3-201ENST00000361804 CCDC83Q8IWF9 413 aa12.78□□□□□ -0.36
SMC3-201ENST00000361804 NECAB1Q8N987 351 aa12.78□□□□□ -0.36
SMC3-201ENST00000361804 STAP2Q9UGK3 403 aa12.78□□□□□ -0.36
SMC3-201ENST00000361804 WNK3Q9BYP7 1800 aa12.78□□□□□ -0.36
SMC3-201ENST00000361804 CASTP20810 708 aaKnown RBP12.77□□□□□ -0.36
SMC3-201ENST00000361804 OS9Q13438 667 aaPredicted RBP12.77□□□□□ -0.36
SMC3-201ENST00000361804 GIMAP6Q6P9H5 292 aa12.77□□□□□ -0.36
SMC3-201ENST00000361804 MBD3O95983 291 aa12.77□□□□□ -0.37
SMC3-201ENST00000361804 SYT1P21579 422 aa12.77□□□□□ -0.37
SMC3-201ENST00000361804 SSH3Q8TE77 659 aa12.77□□□□□ -0.37
SMC3-201ENST00000361804 LSG1Q9H089 658 aaKnown RBP12.77□□□□□ -0.37
SMC3-201ENST00000361804 ERBB3P21860 1342 aa12.76□□□□□ -0.37
SMC3-201ENST00000361804 SGSM2O43147 1006 aa12.76□□□□□ -0.37
SMC3-201ENST00000361804 ZNF500O60304 480 aaPredicted RBP12.76□□□□□ -0.37
SMC3-201ENST00000361804 PRPF40BQ6NWY9 871 aaKnown RBP12.76□□□□□ -0.37
SMC3-201ENST00000361804 MPRIPQ6WCQ1 1025 aa12.76□□□□□ -0.37
SMC3-201ENST00000361804 FERMT3Q86UX7 667 aa12.76□□□□□ -0.37
SMC3-201ENST00000361804 TAF6LQ9Y6J9 622 aa12.76□□□□□ -0.37
SMC3-201ENST00000361804 KCPQ6ZWJ8 1503 aa12.76□□□□□ -0.37
SMC3-201ENST00000361804 ITGB4P16144 1822 aa12.75□□□□□ -0.37
SMC3-201ENST00000361804 DNM1Q05193 864 aaKnown RBP12.75□□□□□ -0.37
SMC3-201ENST00000361804 CWF19L2Q2TBE0 894 aaKnown RBP12.75□□□□□ -0.37
SMC3-201ENST00000361804 TMEM94Q12767 1356 aa12.75□□□□□ -0.37
SMC3-201ENST00000361804 DCCP43146 1447 aa12.75□□□□□ -0.37
SMC3-201ENST00000361804 AP5Z1O43299 807 aa12.75□□□□□ -0.37
SMC3-201ENST00000361804 RAD50Q92878 1312 aa12.74□□□□□ -0.37
SMC3-201ENST00000361804 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.74□□□□□ -0.37
SMC3-201ENST00000361804 MCM2P49736 904 aa12.74□□□□□ -0.37
SMC3-201ENST00000361804 ANAPC15P60006 121 aa12.74□□□□□ -0.37
SMC3-201ENST00000361804 DNTTIP2Q5QJE6 756 aaKnown RBP12.74□□□□□ -0.37
SMC3-201ENST00000361804 KLHDC4Q8TBB5 520 aa12.74□□□□□ -0.37
SMC3-201ENST00000361804 INTS4Q96HW7 963 aaKnown RBP12.74□□□□□ -0.37
SMC3-201ENST00000361804 TTC14Q96N46 770 aa12.74□□□□□ -0.37
SMC3-201ENST00000361804 CHGBP05060 677 aa12.74□□□□□ -0.37
SMC3-201ENST00000361804 JAKMIP1Q96N16 626 aaKnown RBP12.74□□□□□ -0.37
SMC3-201ENST00000361804 WDR33Q9C0J8 1336 aaKnown RBP12.74□□□□□ -0.37
SMC3-201ENST00000361804 VPS37CA5D8V6 355 aaPredicted RBP12.74□□□□□ -0.37
SMC3-201ENST00000361804 ST3GAL1Q11201 340 aa12.74□□□□□ -0.37
SMC3-201ENST00000361804 CCDC39Q9UFE4 941 aa12.74□□□□□ -0.37
SMC3-201ENST00000361804 COL16A1Q07092 1604 aaPredicted RBP12.74□□□□□ -0.37
SMC3-201ENST00000361804 STX6O43752 255 aa12.73□□□□□ -0.37
SMC3-201ENST00000361804 NDUFB9Q9Y6M9 179 aa12.73□□□□□ -0.37
SMC3-201ENST00000361804 CASZ1Q86V15 1759 aa12.73□□□□□ -0.37
SMC3-201ENST00000361804 ADCY5O95622 1261 aa12.73□□□□□ -0.37
SMC3-201ENST00000361804 ZSCAN22P10073 491 aaPredicted RBP12.73□□□□□ -0.37
SMC3-201ENST00000361804 GLIPR1L2Q4G1C9 344 aa12.73□□□□□ -0.37
SMC3-201ENST00000361804 BEND3Q5T5X7 828 aa12.73□□□□□ -0.37
SMC3-201ENST00000361804 FAM227BQ96M60 508 aa12.73□□□□□ -0.37
SMC3-201ENST00000361804 SIL1Q9H173 461 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms