RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 SIRT1Q96EB6 747 aa21.71■■□□□ 1.07
CLIP2-202ENST00000361545 CAMK4Q16566 473 aa21.71■■□□□ 1.07
CLIP2-202ENST00000361545 CCDC144CPQ8IYA2 1237 aa21.71■■□□□ 1.07
CLIP2-202ENST00000361545 SEPT11Q9NVA2 429 aaKnown RBP21.71■■□□□ 1.07
CLIP2-202ENST00000361545 LMTK3Q96Q04 1460 aa21.71■■□□□ 1.07
CLIP2-202ENST00000361545 TNIP1Q15025 636 aa21.71■■□□□ 1.07
CLIP2-202ENST00000361545 ADAMTS12P58397 1594 aa21.7■■□□□ 1.06
CLIP2-202ENST00000361545 NLRP3Q96P20 1036 aa21.7■■□□□ 1.06
CLIP2-202ENST00000361545 CIZ1Q9ULV3 898 aaPredicted RBP21.7■■□□□ 1.06
CLIP2-202ENST00000361545 FLT4P35916 1363 aa21.7■■□□□ 1.06
CLIP2-202ENST00000361545 LMBR1LQ6UX01 489 aa21.7■■□□□ 1.06
CLIP2-202ENST00000361545 CATIPQ7Z7H3 387 aa21.7■■□□□ 1.06
CLIP2-202ENST00000361545 RALGAPBQ86X10 1494 aa21.69■■□□□ 1.06
CLIP2-202ENST00000361545 TSPY2A6NKD2 308 aa21.69■■□□□ 1.06
CLIP2-202ENST00000361545 MYCNP04198 464 aaPredicted RBP21.69■■□□□ 1.06
CLIP2-202ENST00000361545 RDXP35241 583 aaKnown RBP21.69■■□□□ 1.06
CLIP2-202ENST00000361545 VAT1LQ9HCJ6 419 aa21.69■■□□□ 1.06
CLIP2-202ENST00000361545 RHPN1Q8TCX5 695 aa21.69■■□□□ 1.06
CLIP2-202ENST00000361545 RAB11FIP4Q86YS3 637 aa21.69■■□□□ 1.06
CLIP2-202ENST00000361545 PPFIA3O75145 1194 aa21.69■■□□□ 1.06
CLIP2-202ENST00000361545 F8W031 263 aaPredicted RBP21.68■■□□□ 1.06
CLIP2-202ENST00000361545 ASXL1Q8IXJ9 1541 aa21.68■■□□□ 1.06
CLIP2-202ENST00000361545 CDR1P51861 262 aa21.68■■□□□ 1.06
CLIP2-202ENST00000361545 SKIDA1Q1XH10 827 aa21.68■■□□□ 1.06
CLIP2-202ENST00000361545 SCLT1Q96NL6 688 aa21.68■■□□□ 1.06
CLIP2-202ENST00000361545 SH2B1Q9NRF2 756 aaPredicted RBP21.68■■□□□ 1.06
CLIP2-202ENST00000361545 NLRP5P59047 1200 aa21.68■■□□□ 1.06
CLIP2-202ENST00000361545 SPTY2D1Q68D10 685 aaPredicted RBP21.68■■□□□ 1.06
CLIP2-202ENST00000361545 BTG4Q9NY30 223 aa21.68■■□□□ 1.06
CLIP2-202ENST00000361545 HSP90B2PQ58FF3 399 aa21.68■■□□□ 1.06
CLIP2-202ENST00000361545 DZIP3Q86Y13 1208 aaKnown RBP21.68■■□□□ 1.06
CLIP2-202ENST00000361545 CUL5Q93034 780 aa21.68■■□□□ 1.06
CLIP2-202ENST00000361545 SSRP1Q08945 709 aaKnown RBP21.67■■□□□ 1.06
CLIP2-202ENST00000361545 EYA1Q99502 592 aa21.67■■□□□ 1.06
CLIP2-202ENST00000361545 NPATQ14207 1427 aa21.67■■□□□ 1.06
CLIP2-202ENST00000361545 KSR2Q6VAB6 950 aa21.67■■□□□ 1.06
CLIP2-202ENST00000361545 TFCP2L1Q9NZI6 479 aa21.67■■□□□ 1.06
CLIP2-202ENST00000361545 GRM8O00222 908 aa21.67■■□□□ 1.06
CLIP2-202ENST00000361545 TMEM67Q5HYA8 995 aa21.67■■□□□ 1.06
CLIP2-202ENST00000361545 ACBD3Q9H3P7 528 aa21.67■■□□□ 1.06
CLIP2-202ENST00000361545 LIMCH1Q9UPQ0 1083 aa21.67■■□□□ 1.06
CLIP2-202ENST00000361545 FAM177A1Q8N128 213 aaPredicted RBP21.66■■□□□ 1.06
CLIP2-202ENST00000361545 CCDC194A0A1B0GVG4 234 aa21.66■■□□□ 1.06
CLIP2-202ENST00000361545 PDE4BQ07343 736 aa21.66■■□□□ 1.06
CLIP2-202ENST00000361545 UQCRFS1P1P0C7P4 283 aa21.66■■□□□ 1.06
CLIP2-202ENST00000361545 PDIA4P13667 645 aaKnown RBP21.66■■□□□ 1.06
CLIP2-202ENST00000361545 MCM4P33991 863 aa21.66■■□□□ 1.06
CLIP2-202ENST00000361545 ATP2B3Q16720 1220 aa21.66■■□□□ 1.06
CLIP2-202ENST00000361545 CCP110O43303 1012 aa21.66■■□□□ 1.06
CLIP2-202ENST00000361545 TBC1D9Q6ZT07 1266 aa21.66■■□□□ 1.06
CLIP2-202ENST00000361545 TRMT1LQ7Z2T5 733 aaKnown RBP21.66■■□□□ 1.06
CLIP2-202ENST00000361545 CABP5Q9NP86 173 aa21.66■■□□□ 1.06
CLIP2-202ENST00000361545 LUC7LQ9NQ29 371 aaKnown RBP21.66■■□□□ 1.06
CLIP2-202ENST00000361545 HLA-DOAP06340 250 aa21.66■■□□□ 1.06
CLIP2-202ENST00000361545 MFSD6Q6ZSS7 791 aa21.66■■□□□ 1.06
CLIP2-202ENST00000361545 NUP160Q12769 1436 aa21.65■■□□□ 1.06
CLIP2-202ENST00000361545 TEX35Q5T0J7 233 aa21.65■■□□□ 1.06
CLIP2-202ENST00000361545 MICU3Q86XE3 530 aa21.65■■□□□ 1.06
CLIP2-202ENST00000361545 KAT6BQ8WYB5 2073 aa21.65■■□□□ 1.06
CLIP2-202ENST00000361545 IGHDP01880 384 aa21.65■■□□□ 1.06
CLIP2-202ENST00000361545 ABCC2Q92887 1545 aa21.65■■□□□ 1.06
CLIP2-202ENST00000361545 TBX22Q9Y458 520 aa21.65■■□□□ 1.06
CLIP2-202ENST00000361545 ABCC1P33527 1531 aa21.65■■□□□ 1.06
CLIP2-202ENST00000361545 CBFA2T2O43439 604 aa21.65■■□□□ 1.06
CLIP2-202ENST00000361545 ZNF771Q7L3S4 317 aaPredicted RBP21.65■■□□□ 1.06
CLIP2-202ENST00000361545 FILIP1Q7Z7B0 1213 aa21.65■■□□□ 1.06
CLIP2-202ENST00000361545 KRT24Q2M2I5 525 aa21.64■■□□□ 1.06
CLIP2-202ENST00000361545 UTP14AQ9BVJ6 771 aaKnown RBP21.64■■□□□ 1.06
CLIP2-202ENST00000361545 EIF5P55010 431 aaKnown RBP21.64■■□□□ 1.05
CLIP2-202ENST00000361545 UBA5Q9GZZ9 404 aa21.64■■□□□ 1.05
CLIP2-202ENST00000361545 RTCBQ9Y3I0 505 aaKnown RBP21.64■■□□□ 1.05
CLIP2-202ENST00000361545 HOXC9P31274 260 aa21.63■■□□□ 1.05
CLIP2-202ENST00000361545 MAP3K11Q16584 847 aa21.63■■□□□ 1.05
CLIP2-202ENST00000361545 KLHL10Q6JEL2 608 aa21.63■■□□□ 1.05
CLIP2-202ENST00000361545 KAT14Q9H8E8 782 aa21.63■■□□□ 1.05
CLIP2-202ENST00000361545 USP16Q9Y5T5 823 aa21.63■■□□□ 1.05
CLIP2-202ENST00000361545 MYO1BO43795 1136 aa21.63■■□□□ 1.05
CLIP2-202ENST00000361545 ORAI2Q96SN7 254 aa21.63■■□□□ 1.05
CLIP2-202ENST00000361545 CRNKL1Q9BZJ0 848 aaKnown RBP21.63■■□□□ 1.05
CLIP2-202ENST00000361545 ARHGAP45Q92619 1136 aa21.63■■□□□ 1.05
CLIP2-202ENST00000361545 CYP7A1P22680 504 aa21.62■■□□□ 1.05
CLIP2-202ENST00000361545 HMGN5P82970 282 aaKnown RBP21.62■■□□□ 1.05
CLIP2-202ENST00000361545 STX8Q9UNK0 236 aa21.62■■□□□ 1.05
CLIP2-202ENST00000361545 CTTNBP2Q8WZ74 1663 aa21.62■■□□□ 1.05
CLIP2-202ENST00000361545 MYO6Q9UM54 1294 aa21.62■■□□□ 1.05
CLIP2-202ENST00000361545 MAP3K19Q56UN5 1328 aa21.62■■□□□ 1.05
CLIP2-202ENST00000361545 TTC22Q5TAA0 569 aa21.62■■□□□ 1.05
CLIP2-202ENST00000361545 PHACTR3Q96KR7 559 aa21.62■■□□□ 1.05
CLIP2-202ENST00000361545 EIF4G3O43432 1585 aaKnown RBP21.62■■□□□ 1.05
CLIP2-202ENST00000361545 A0A1W2PP64 1363 aa21.62■■□□□ 1.05
CLIP2-202ENST00000361545 DCAF5Q96JK2 942 aa21.62■■□□□ 1.05
CLIP2-202ENST00000361545 PA2G4Q9UQ80 394 aaKnown RBP21.62■■□□□ 1.05
CLIP2-202ENST00000361545 WDR62O43379 1518 aa21.61■■□□□ 1.05
CLIP2-202ENST00000361545 SYCE3A1L190 88 aa21.61■■□□□ 1.05
CLIP2-202ENST00000361545 ALDH1L1O75891 902 aa21.61■■□□□ 1.05
CLIP2-202ENST00000361545 CARD14Q9BXL6 1004 aa21.61■■□□□ 1.05
CLIP2-202ENST00000361545 CWF19L2Q2TBE0 894 aaKnown RBP21.61■■□□□ 1.05
CLIP2-202ENST00000361545 MRPL50Q8N5N7 158 aaKnown RBP21.61■■□□□ 1.05
CLIP2-202ENST00000361545 IARSP41252 1262 aaKnown RBP21.61■■□□□ 1.05
CLIP2-202ENST00000361545 NEK1Q96PY6 1258 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms