RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 BABAM1Q9NWV8 329 aa16.42■□□□□ 0.22
CTR9-201ENST00000361367 WDR33Q9C0J8 1336 aaKnown RBP16.42■□□□□ 0.22
CTR9-201ENST00000361367 PLA2R1Q13018 1463 aa16.42■□□□□ 0.22
CTR9-201ENST00000361367 POLR3DP05423 398 aaPredicted RBP16.42■□□□□ 0.22
CTR9-201ENST00000361367 RLBP1P12271 317 aa16.42■□□□□ 0.22
CTR9-201ENST00000361367 ZNF287Q9HBT7 754 aa16.41■□□□□ 0.22
CTR9-201ENST00000361367 TRIM35Q9UPQ4 493 aa16.41■□□□□ 0.22
CTR9-201ENST00000361367 CHL1O00533 1208 aa16.41■□□□□ 0.22
CTR9-201ENST00000361367 ANKRD18AQ8IVF6 992 aa16.41■□□□□ 0.22
CTR9-201ENST00000361367 PRPF40AO75400 957 aaKnown RBP16.41■□□□□ 0.22
CTR9-201ENST00000361367 MBD3O95983 291 aa16.41■□□□□ 0.22
CTR9-201ENST00000361367 CCAR1Q8IX12 1150 aaKnown RBP16.41■□□□□ 0.22
CTR9-201ENST00000361367 UTP14AQ9BVJ6 771 aaKnown RBP16.41■□□□□ 0.22
CTR9-201ENST00000361367 KINO60870 393 aaKnown RBP16.4■□□□□ 0.22
CTR9-201ENST00000361367 TTF1Q15361 905 aaPredicted RBP16.4■□□□□ 0.22
CTR9-201ENST00000361367 FAM98CQ17RN3 349 aaKnown RBP16.4■□□□□ 0.22
CTR9-201ENST00000361367 SOGA3Q5TF21 947 aa16.4■□□□□ 0.22
CTR9-201ENST00000361367 ARHGAP31Q2M1Z3 1444 aa16.4■□□□□ 0.22
CTR9-201ENST00000361367 PCMTD1Q96MG8 357 aaPredicted RBP16.4■□□□□ 0.22
CTR9-201ENST00000361367 MKNK2Q9HBH9 465 aa16.4■□□□□ 0.22
CTR9-201ENST00000361367 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
CTR9-201ENST00000361367 JMYQ8N9B5 988 aa16.4■□□□□ 0.22
CTR9-201ENST00000361367 NUCB1Q02818 461 aa16.39■□□□□ 0.21
CTR9-201ENST00000361367 ATP2B3Q16720 1220 aa16.39■□□□□ 0.21
CTR9-201ENST00000361367 TPTE2Q6XPS3 522 aa16.39■□□□□ 0.21
CTR9-201ENST00000361367 SLC52A2Q9HAB3 445 aa16.39■□□□□ 0.21
CTR9-201ENST00000361367 TFCP2L1Q9NZI6 479 aa16.39■□□□□ 0.21
CTR9-201ENST00000361367 IL15P40933 162 aaPredicted RBP16.39■□□□□ 0.21
CTR9-201ENST00000361367 TTC22Q5TAA0 569 aa16.39■□□□□ 0.21
CTR9-201ENST00000361367 CRACR2BQ8N4Y2 399 aaPredicted RBP16.39■□□□□ 0.21
CTR9-201ENST00000361367 HOXB7P09629 217 aa16.38■□□□□ 0.21
CTR9-201ENST00000361367 SLF2Q8IX21 1173 aa16.38■□□□□ 0.21
CTR9-201ENST00000361367 ADCY10Q96PN6 1610 aa16.38■□□□□ 0.21
CTR9-201ENST00000361367 ZNF213O14771 459 aa16.38■□□□□ 0.21
CTR9-201ENST00000361367 UQCRFS1P1P0C7P4 283 aa16.38■□□□□ 0.21
CTR9-201ENST00000361367 TBC1D9Q6ZT07 1266 aa16.38■□□□□ 0.21
CTR9-201ENST00000361367 G2E3Q7L622 706 aa16.38■□□□□ 0.21
CTR9-201ENST00000361367 PRIM1P49642 420 aaKnown RBP16.38■□□□□ 0.21
CTR9-201ENST00000361367 TRAK2O60296 914 aa16.38■□□□□ 0.21
CTR9-201ENST00000361367 TXLNAP40222 546 aa16.38■□□□□ 0.21
CTR9-201ENST00000361367 PA2G4Q9UQ80 394 aaKnown RBP16.38■□□□□ 0.21
CTR9-201ENST00000361367 LDHCP07864 332 aa16.37■□□□□ 0.21
CTR9-201ENST00000361367 KRT85P78386 507 aa16.37■□□□□ 0.21
CTR9-201ENST00000361367 CAVIN1Q6NZI2 390 aaKnown RBP16.37■□□□□ 0.21
CTR9-201ENST00000361367 DDX11Q96FC9 970 aa16.37■□□□□ 0.21
CTR9-201ENST00000361367 CEP89Q96ST8 783 aa16.37■□□□□ 0.21
CTR9-201ENST00000361367 NYXQ9GZU5 481 aa16.37■□□□□ 0.21
CTR9-201ENST00000361367 IRS4O14654 1257 aaPredicted RBP16.36■□□□□ 0.21
CTR9-201ENST00000361367 GNPATO15228 680 aa16.36■□□□□ 0.21
CTR9-201ENST00000361367 USP21Q9UK80 565 aa16.36■□□□□ 0.21
CTR9-201ENST00000361367 MPHOSPH10O00566 681 aaKnown RBP16.36■□□□□ 0.21
CTR9-201ENST00000361367 PDE1AP54750 535 aa16.36■□□□□ 0.21
CTR9-201ENST00000361367 RANBP6O60518 1105 aaKnown RBP16.36■□□□□ 0.21
CTR9-201ENST00000361367 CDK5RAP3Q96JB5 506 aa16.36■□□□□ 0.21
CTR9-201ENST00000361367 KDM5AP29375 1690 aaKnown RBP16.36■□□□□ 0.21
CTR9-201ENST00000361367 TET3O43151 1660 aa16.35■□□□□ 0.21
CTR9-201ENST00000361367 ME1P48163 572 aa16.35■□□□□ 0.21
CTR9-201ENST00000361367 CEP85Q6P2H3 762 aa16.35■□□□□ 0.21
CTR9-201ENST00000361367 OLFM4Q6UX06 510 aa16.35■□□□□ 0.21
CTR9-201ENST00000361367 PIBF1Q8WXW3 757 aa16.35■□□□□ 0.21
CTR9-201ENST00000361367 ZBTB40Q9NUA8 1239 aa16.35■□□□□ 0.21
CTR9-201ENST00000361367 CCNL1Q9UK58 526 aaPredicted RBP16.35■□□□□ 0.21
CTR9-201ENST00000361367 HMGB1P09429 215 aaKnown RBP16.35■□□□□ 0.21
CTR9-201ENST00000361367 IQCA1Q86XH1 822 aa16.35■□□□□ 0.21
CTR9-201ENST00000361367 RNF41Q9H4P4 317 aaPredicted RBP16.35■□□□□ 0.21
CTR9-201ENST00000361367 ZNF496Q96IT1 587 aaPredicted RBP16.35■□□□□ 0.21
CTR9-201ENST00000361367 PRR36Q9H6K5 1346 aa16.35■□□□□ 0.21
CTR9-201ENST00000361367 INSRP06213 1382 aa16.35■□□□□ 0.21
CTR9-201ENST00000361367 CCDC83Q8IWF9 413 aa16.35■□□□□ 0.21
CTR9-201ENST00000361367 NAT10Q9H0A0 1025 aaKnown RBP16.35■□□□□ 0.21
CTR9-201ENST00000361367 ANO8Q9HCE9 1232 aaPredicted RBP16.35■□□□□ 0.21
CTR9-201ENST00000361367 CIZ1Q9ULV3 898 aaPredicted RBP16.35■□□□□ 0.21
CTR9-201ENST00000361367 IPO7O95373 1038 aaKnown RBP16.34■□□□□ 0.21
CTR9-201ENST00000361367 SHROOM2Q13796 1616 aa16.34■□□□□ 0.21
CTR9-201ENST00000361367 ZNF444Q8N0Y2 327 aaPredicted RBP16.34■□□□□ 0.21
CTR9-201ENST00000361367 IQSEC3Q9UPP2 1182 aaPredicted RBP16.34■□□□□ 0.21
CTR9-201ENST00000361367 KIF1BO60333 1816 aa16.34■□□□□ 0.21
CTR9-201ENST00000361367 SPTY2D1Q68D10 685 aaPredicted RBP16.34■□□□□ 0.21
CTR9-201ENST00000361367 WASF1Q92558 559 aa16.34■□□□□ 0.21
CTR9-201ENST00000361367 NOL7Q9UMY1 257 aaKnown RBP16.34■□□□□ 0.21
CTR9-201ENST00000361367 FAM135BQ49AJ0 1406 aa16.34■□□□□ 0.21
CTR9-201ENST00000361367 A1BGP04217 495 aa16.33■□□□□ 0.21
CTR9-201ENST00000361367 SDSP20132 328 aa16.33■□□□□ 0.21
CTR9-201ENST00000361367 RNF214Q8ND24 703 aa16.33■□□□□ 0.21
CTR9-201ENST00000361367 PLBD2Q8NHP8 589 aa16.33■□□□□ 0.21
CTR9-201ENST00000361367 BAG3O95817 575 aa16.33■□□□□ 0.2
CTR9-201ENST00000361367 DCTPP1Q9H773 170 aa16.33■□□□□ 0.2
CTR9-201ENST00000361367 ZNF335Q9H4Z2 1342 aaPredicted RBP16.33■□□□□ 0.2
CTR9-201ENST00000361367 TRAPPC3LQ5T215 181 aa16.33■□□□□ 0.2
CTR9-201ENST00000361367 DNAJC10Q8IXB1 793 aa16.33■□□□□ 0.2
CTR9-201ENST00000361367 PDIA4P13667 645 aaKnown RBP16.32■□□□□ 0.2
CTR9-201ENST00000361367 CCDC196A0A1B0GTZ2 297 aa16.32■□□□□ 0.2
CTR9-201ENST00000361367 ARHGEF25Q86VW2 580 aa16.32■□□□□ 0.2
CTR9-201ENST00000361367 CTCFLQ8NI51 663 aaPredicted RBP16.31■□□□□ 0.2
CTR9-201ENST00000361367 FAM89AQ96GI7 184 aa16.31■□□□□ 0.2
CTR9-201ENST00000361367 SH2B1Q9NRF2 756 aaPredicted RBP16.31■□□□□ 0.2
CTR9-201ENST00000361367 ATP7BP35670 1465 aa16.31■□□□□ 0.2
CTR9-201ENST00000361367 USP6P35125 1406 aa16.31■□□□□ 0.2
CTR9-201ENST00000361367 IFIT3O14879 490 aaKnown RBP16.31■□□□□ 0.2
CTR9-201ENST00000361367 C16orf71Q8IYS4 520 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms