RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 GJB2P29033 226 aa24.54■■□□□ 1.52
SMURF1-201ENST00000361125 KLHL10Q6JEL2 608 aa24.54■■□□□ 1.52
SMURF1-201ENST00000361125 C6orf229H3BNL8 230 aa24.54■■□□□ 1.52
SMURF1-201ENST00000361125 MEIS3Q99687 375 aa24.54■■□□□ 1.52
SMURF1-201ENST00000361125 ANKRD13DQ6ZTN6 518 aa24.53■■□□□ 1.52
SMURF1-201ENST00000361125 CADPS2Q86UW7 1296 aa24.53■■□□□ 1.52
SMURF1-201ENST00000361125 BAG4O95429 457 aaKnown RBP24.53■■□□□ 1.52
SMURF1-201ENST00000361125 PAF1Q8N7H5 531 aa24.53■■□□□ 1.52
SMURF1-201ENST00000361125 TTC21AQ8NDW8 1320 aa24.52■■□□□ 1.52
SMURF1-201ENST00000361125 ACSBG1Q96GR2 724 aa24.52■■□□□ 1.52
SMURF1-201ENST00000361125 SCAND2PQ9GZW5 306 aaPredicted RBP24.52■■□□□ 1.52
SMURF1-201ENST00000361125 GDPD2Q9HCC8 539 aa24.52■■□□□ 1.52
SMURF1-201ENST00000361125 UHRF1BP1LA0JNW5 1464 aa24.52■■□□□ 1.52
SMURF1-201ENST00000361125 RNF41Q9H4P4 317 aaPredicted RBP24.52■■□□□ 1.52
SMURF1-201ENST00000361125 C8orf58Q8NAV2 365 aa24.52■■□□□ 1.52
SMURF1-201ENST00000361125 NUP160Q12769 1436 aa24.51■■□□□ 1.51
SMURF1-201ENST00000361125 IBSPP21815 317 aaPredicted RBP24.51■■□□□ 1.51
SMURF1-201ENST00000361125 TRAPPC8Q9Y2L5 1435 aa24.51■■□□□ 1.51
SMURF1-201ENST00000361125 NLRP5P59047 1200 aa24.51■■□□□ 1.51
SMURF1-201ENST00000361125 EIF4A2Q14240 407 aaKnown RBP24.51■■□□□ 1.51
SMURF1-201ENST00000361125 TTF1Q15361 905 aaPredicted RBP24.51■■□□□ 1.51
SMURF1-201ENST00000361125 CCDC66A2RUB6 948 aa24.51■■□□□ 1.51
SMURF1-201ENST00000361125 XAGE3Q8WTP9 111 aa24.51■■□□□ 1.51
SMURF1-201ENST00000361125 CDC5LQ99459 802 aaKnown RBP24.5■■□□□ 1.51
SMURF1-201ENST00000361125 TXLNBQ8N3L3 684 aa24.5■■□□□ 1.51
SMURF1-201ENST00000361125 CATIPQ7Z7H3 387 aa24.5■■□□□ 1.51
SMURF1-201ENST00000361125 KIAA1328Q86T90 577 aa24.5■■□□□ 1.51
SMURF1-201ENST00000361125 CKAP2LQ8IYA6 745 aa24.5■■□□□ 1.51
SMURF1-201ENST00000361125 ZCRB1Q8TBF4 217 aaKnown RBP24.5■■□□□ 1.51
SMURF1-201ENST00000361125 EPB41L2O43491 1005 aaKnown RBP24.5■■□□□ 1.51
SMURF1-201ENST00000361125 LRRC59Q96AG4 307 aaKnown RBP24.5■■□□□ 1.51
SMURF1-201ENST00000361125 MSH6P52701 1360 aa24.5■■□□□ 1.51
SMURF1-201ENST00000361125 ERLIN2O94905 339 aa24.5■■□□□ 1.51
SMURF1-201ENST00000361125 DDX46Q7L014 1031 aaKnown RBP24.49■■□□□ 1.51
SMURF1-201ENST00000361125 RHPN1Q8TCX5 695 aa24.49■■□□□ 1.51
SMURF1-201ENST00000361125 HMGB2P26583 209 aaKnown RBP24.49■■□□□ 1.51
SMURF1-201ENST00000361125 TMEM67Q5HYA8 995 aa24.49■■□□□ 1.51
SMURF1-201ENST00000361125 MRPL50Q8N5N7 158 aaKnown RBP24.48■■□□□ 1.51
SMURF1-201ENST00000361125 TFIP11Q9UBB9 837 aaKnown RBP24.48■■□□□ 1.51
SMURF1-201ENST00000361125 ANO10Q9NW15 660 aa24.48■■□□□ 1.51
SMURF1-201ENST00000361125 COPS6Q7L5N1 327 aa24.48■■□□□ 1.51
SMURF1-201ENST00000361125 ZNF518AQ6AHZ1 1483 aa24.48■■□□□ 1.51
SMURF1-201ENST00000361125 RFC4P35249 363 aa24.48■■□□□ 1.51
SMURF1-201ENST00000361125 WDR7Q9Y4E6 1490 aa24.47■■□□□ 1.51
SMURF1-201ENST00000361125 CABLES1Q8TDN4 633 aa24.47■■□□□ 1.51
SMURF1-201ENST00000361125 USP16Q9Y5T5 823 aa24.47■■□□□ 1.51
SMURF1-201ENST00000361125 NEK1Q96PY6 1258 aa24.47■■□□□ 1.51
SMURF1-201ENST00000361125 UBA5Q9GZZ9 404 aa24.47■■□□□ 1.51
SMURF1-201ENST00000361125 KLHL40Q2TBA0 621 aa24.47■■□□□ 1.51
SMURF1-201ENST00000361125 SLF2Q8IX21 1173 aa24.47■■□□□ 1.51
SMURF1-201ENST00000361125 TNIP1Q15025 636 aa24.46■■□□□ 1.51
SMURF1-201ENST00000361125 MTHFSDQ2M296 383 aaKnown RBP24.46■■□□□ 1.51
SMURF1-201ENST00000361125 RBM27Q9P2N5 1060 aaKnown RBP24.46■■□□□ 1.51
SMURF1-201ENST00000361125 VAT1LQ9HCJ6 419 aa24.46■■□□□ 1.51
SMURF1-201ENST00000361125 CHMP4BP1P59074 171 aa24.46■■□□□ 1.51
SMURF1-201ENST00000361125 FAM193AP78312 1265 aa24.46■■□□□ 1.51
SMURF1-201ENST00000361125 CWC15Q9P013 229 aaKnown RBP24.46■■□□□ 1.51
SMURF1-201ENST00000361125 CCDC194A0A1B0GVG4 234 aa24.45■■□□□ 1.51
SMURF1-201ENST00000361125 SDSP20132 328 aa24.45■■□□□ 1.5
SMURF1-201ENST00000361125 MICU3Q86XE3 530 aa24.45■■□□□ 1.5
SMURF1-201ENST00000361125 TNNQ9UQP3 1299 aa24.45■■□□□ 1.5
SMURF1-201ENST00000361125 FSIP1Q8NA03 581 aa24.45■■□□□ 1.5
SMURF1-201ENST00000361125 TESK2Q96S53 571 aa24.45■■□□□ 1.5
SMURF1-201ENST00000361125 POLKQ9UBT6 870 aa24.45■■□□□ 1.5
SMURF1-201ENST00000361125 STX6O43752 255 aa24.44■■□□□ 1.5
SMURF1-201ENST00000361125 ZNF397Q8NF99 534 aaPredicted RBP24.44■■□□□ 1.5
SMURF1-201ENST00000361125 PHAXQ9H814 394 aaKnown RBP24.44■■□□□ 1.5
SMURF1-201ENST00000361125 ATP6V1AP38606 617 aa24.44■■□□□ 1.5
SMURF1-201ENST00000361125 AKAP4Q5JQC9 854 aa24.44■■□□□ 1.5
SMURF1-201ENST00000361125 MFSD6Q6ZSS7 791 aa24.44■■□□□ 1.5
SMURF1-201ENST00000361125 CNNM3Q8NE01 707 aa24.44■■□□□ 1.5
SMURF1-201ENST00000361125 ARHGAP45Q92619 1136 aa24.44■■□□□ 1.5
SMURF1-201ENST00000361125 USP25Q9UHP3 1055 aa24.44■■□□□ 1.5
SMURF1-201ENST00000361125 XRCC6P12956 609 aaKnown RBP eCLIP24.44■■□□□ 1.5
SMURF1-201ENST00000361125 PDCL2Q8N4E4 241 aa24.44■■□□□ 1.5
SMURF1-201ENST00000361125 CENPHQ9H3R5 247 aa24.44■■□□□ 1.5
SMURF1-201ENST00000361125 ZSCAN23Q3MJ62 389 aa24.44■■□□□ 1.5
SMURF1-201ENST00000361125 GOLGA6L10A6NI86 522 aa24.43■■□□□ 1.5
SMURF1-201ENST00000361125 H0YHG0 523 aa24.43■■□□□ 1.5
SMURF1-201ENST00000361125 ARHGAP29Q52LW3 1261 aa24.43■■□□□ 1.5
SMURF1-201ENST00000361125 CUL5Q93034 780 aa24.43■■□□□ 1.5
SMURF1-201ENST00000361125 ZNF622Q969S3 477 aaKnown RBP eCLIP24.43■■□□□ 1.53e-7■■□□□ 14.1
SMURF1-201ENST00000361125 TEX14Q8IWB6 1497 aa24.43■■□□□ 1.5
SMURF1-201ENST00000361125 NBPF6Q5VWK0 638 aa24.43■■□□□ 1.5
SMURF1-201ENST00000361125 NBPF5PQ86XG9 351 aaPredicted RBP24.43■■□□□ 1.5
SMURF1-201ENST00000361125 NBPF4Q96M43 638 aa24.43■■□□□ 1.5
SMURF1-201ENST00000361125 TSPY2A6NKD2 308 aa24.43■■□□□ 1.5
SMURF1-201ENST00000361125 NEFHP12036 1026 aa24.43■■□□□ 1.5
SMURF1-201ENST00000361125 DMRT2Q9Y5R5 561 aa24.43■■□□□ 1.5
SMURF1-201ENST00000361125 EIF2AK4Q9P2K8 1649 aaKnown RBP24.43■■□□□ 1.5
SMURF1-201ENST00000361125 KIAA0556O60303 1618 aa24.43■■□□□ 1.5
SMURF1-201ENST00000361125 CCDC152Q4G0S7 254 aa24.42■■□□□ 1.5
SMURF1-201ENST00000361125 IARSP41252 1262 aaKnown RBP24.42■■□□□ 1.5
SMURF1-201ENST00000361125 SSR1P43307 286 aaKnown RBP24.42■■□□□ 1.5
SMURF1-201ENST00000361125 METAP2P50579 478 aaKnown RBP eCLIP24.42■■□□□ 1.5
SMURF1-201ENST00000361125 NCOA7Q8NI08 942 aa24.42■■□□□ 1.5
SMURF1-201ENST00000361125 TSG101Q99816 390 aa24.42■■□□□ 1.5
SMURF1-201ENST00000361125 C16orf71Q8IYS4 520 aaPredicted RBP24.42■■□□□ 1.5
SMURF1-201ENST00000361125 IQSEC3Q9UPP2 1182 aaPredicted RBP24.42■■□□□ 1.5
SMURF1-201ENST00000361125 POLR3AO14802 1390 aaPredicted RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms