RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 TIAM2Q8IVF5 1701 aa11.57□□□□□ -0.56
COL4A3BP-202ENST00000357457 COL3A1P02461 1466 aaPredicted RBP11.57□□□□□ -0.56
COL4A3BP-202ENST00000357457 CEMIPQ8WUJ3 1361 aa11.57□□□□□ -0.56
COL4A3BP-202ENST00000357457 C21orf2O43822 256 aa11.57□□□□□ -0.56
COL4A3BP-202ENST00000357457 CAMTA2O94983 1202 aa11.57□□□□□ -0.56
COL4A3BP-202ENST00000357457 A1BGP04217 495 aa11.57□□□□□ -0.56
COL4A3BP-202ENST00000357457 CC2D1BQ5T0F9 858 aaKnown RBP11.57□□□□□ -0.56
COL4A3BP-202ENST00000357457 SLX4Q8IY92 1834 aa11.57□□□□□ -0.56
COL4A3BP-202ENST00000357457 SPDYE4A6NLX3 237 aa11.56□□□□□ -0.56
COL4A3BP-202ENST00000357457 SRGNP10124 158 aa11.56□□□□□ -0.56
COL4A3BP-202ENST00000357457 ERFEQ4G0M1 354 aa11.56□□□□□ -0.56
COL4A3BP-202ENST00000357457 CNKSR1Q969H4 720 aa11.56□□□□□ -0.56
COL4A3BP-202ENST00000357457 FMNL2Q96PY5 1086 aa11.56□□□□□ -0.56
COL4A3BP-202ENST00000357457 SETDB2Q96T68 719 aa11.56□□□□□ -0.56
COL4A3BP-202ENST00000357457 SCN7AQ01118 1682 aa11.55□□□□□ -0.56
COL4A3BP-202ENST00000357457 COL11A2P13942 1736 aaPredicted RBP11.55□□□□□ -0.56
COL4A3BP-202ENST00000357457 STYK1Q6J9G0 422 aa11.55□□□□□ -0.56
COL4A3BP-202ENST00000357457 CLEC4GQ6UXB4 293 aa11.55□□□□□ -0.56
COL4A3BP-202ENST00000357457 CCDC24Q8N4L8 307 aa11.55□□□□□ -0.56
COL4A3BP-202ENST00000357457 C7orf43Q8WVR3 580 aa11.55□□□□□ -0.56
COL4A3BP-202ENST00000357457 KLRG2A4D1S0 409 aaPredicted RBP11.54□□□□□ -0.56
COL4A3BP-202ENST00000357457 U2SURPO15042 1029 aaKnown RBP11.54□□□□□ -0.56
COL4A3BP-202ENST00000357457 KCNQ3O43525 872 aa11.54□□□□□ -0.56
COL4A3BP-202ENST00000357457 HSPA1AP0DMV8 641 aaKnown RBP11.54□□□□□ -0.56
COL4A3BP-202ENST00000357457 HSPA1BP0DMV9 641 aaKnown RBP11.54□□□□□ -0.56
COL4A3BP-202ENST00000357457 SOGA3Q5TF21 947 aa11.54□□□□□ -0.56
COL4A3BP-202ENST00000357457 TNS4Q8IZW8 715 aa11.54□□□□□ -0.56
COL4A3BP-202ENST00000357457 CNBD1Q8NA66 436 aa11.54□□□□□ -0.56
COL4A3BP-202ENST00000357457 CCER1Q8TC90 406 aaPredicted RBP11.54□□□□□ -0.56
COL4A3BP-202ENST00000357457 MASTLQ96GX5 879 aa11.54□□□□□ -0.56
COL4A3BP-202ENST00000357457 PHACTR3Q96KR7 559 aa11.54□□□□□ -0.56
COL4A3BP-202ENST00000357457 TAOK3Q9H2K8 898 aa11.54□□□□□ -0.56
COL4A3BP-202ENST00000357457 USP16Q9Y5T5 823 aa11.54□□□□□ -0.56
COL4A3BP-202ENST00000357457 ARFGEF2Q9Y6D5 1785 aa11.54□□□□□ -0.56
COL4A3BP-202ENST00000357457 BTBD11A6QL63 1104 aa11.53□□□□□ -0.56
COL4A3BP-202ENST00000357457 RGL2O15211 777 aa11.53□□□□□ -0.56
COL4A3BP-202ENST00000357457 ST5P78524 1137 aa11.53□□□□□ -0.56
COL4A3BP-202ENST00000357457 CHADLQ6NUI6 762 aa11.53□□□□□ -0.56
COL4A3BP-202ENST00000357457 PRPF40BQ6NWY9 871 aaKnown RBP11.53□□□□□ -0.56
COL4A3BP-202ENST00000357457 CREBZFQ9NS37 354 aa11.53□□□□□ -0.56
COL4A3BP-202ENST00000357457 ZNF330Q9Y3S2 320 aaPredicted RBP11.53□□□□□ -0.56
COL4A3BP-202ENST00000357457 BCORQ6W2J9 1755 aa11.52□□□□□ -0.57
COL4A3BP-202ENST00000357457 SCN4AP35499 1836 aa11.52□□□□□ -0.57
COL4A3BP-202ENST00000357457 DDNO94850 711 aaPredicted RBP11.52□□□□□ -0.57
COL4A3BP-202ENST00000357457 NPM2Q86SE8 214 aaKnown RBP11.52□□□□□ -0.57
COL4A3BP-202ENST00000357457 DZIP3Q86Y13 1208 aaKnown RBP11.52□□□□□ -0.57
COL4A3BP-202ENST00000357457 L3MBTL3Q96JM7 780 aaPredicted RBP11.52□□□□□ -0.57
COL4A3BP-202ENST00000357457 RSPH6AQ9H0K4 717 aa11.52□□□□□ -0.57
COL4A3BP-202ENST00000357457 CACNA1SQ13698 1873 aa11.52□□□□□ -0.57
COL4A3BP-202ENST00000357457 POTEIP0CG38 1075 aa11.51□□□□□ -0.57
COL4A3BP-202ENST00000357457 POTEJP0CG39 1038 aa11.51□□□□□ -0.57
COL4A3BP-202ENST00000357457 PRAMEF22A3QJZ6 481 aa11.5□□□□□ -0.57
COL4A3BP-202ENST00000357457 SNRPA1P09661 255 aaKnown RBP11.5□□□□□ -0.57
COL4A3BP-202ENST00000357457 NPR1P16066 1061 aa11.5□□□□□ -0.57
COL4A3BP-202ENST00000357457 PRKAR2BP31323 418 aa11.5□□□□□ -0.57
COL4A3BP-202ENST00000357457 PASKQ96RG2 1323 aa11.5□□□□□ -0.57
COL4A3BP-202ENST00000357457 IQCA1LA6NCM1 817 aa11.49□□□□□ -0.57
COL4A3BP-202ENST00000357457 NBPF26B4DH59 902 aa11.49□□□□□ -0.57
COL4A3BP-202ENST00000357457 NPHP1O15259 732 aa11.49□□□□□ -0.57
COL4A3BP-202ENST00000357457 NBPF10Q6P3W6 841 aaKnown RBP11.49□□□□□ -0.57
COL4A3BP-202ENST00000357457 TPTE2Q6XPS3 522 aa11.49□□□□□ -0.57
COL4A3BP-202ENST00000357457 LDHDQ86WU2 507 aa11.49□□□□□ -0.57
COL4A3BP-202ENST00000357457 NBPF5PQ86XG9 351 aaPredicted RBP11.49□□□□□ -0.57
COL4A3BP-202ENST00000357457 NBPF15Q8N660 670 aa11.49□□□□□ -0.57
COL4A3BP-202ENST00000357457 TAF1DQ9H5J8 278 aaPredicted RBP11.49□□□□□ -0.57
COL4A3BP-202ENST00000357457 ZNF652Q9Y2D9 606 aa11.49□□□□□ -0.57
COL4A3BP-202ENST00000357457 HTATSF1O43719 755 aaKnown RBP11.48□□□□□ -0.57
COL4A3BP-202ENST00000357457 ITGBL1O95965 494 aaPredicted RBP11.48□□□□□ -0.57
COL4A3BP-202ENST00000357457 PIP4K2AP48426 406 aaPredicted RBP11.48□□□□□ -0.57
COL4A3BP-202ENST00000357457 FKBP4Q02790 459 aaKnown RBP eCLIP11.48□□□□□ -0.57
COL4A3BP-202ENST00000357457 CCDC93Q567U6 631 aa11.48□□□□□ -0.57
COL4A3BP-202ENST00000357457 CNTNAP1P78357 1384 aa11.47□□□□□ -0.57
COL4A3BP-202ENST00000357457 SPDYE2BA6NHP3 402 aa11.47□□□□□ -0.57
COL4A3BP-202ENST00000357457 SPDYE6P0CI01 402 aa11.47□□□□□ -0.57
COL4A3BP-202ENST00000357457 ALDH1B1P30837 517 aa11.47□□□□□ -0.57
COL4A3BP-202ENST00000357457 SPDYE2Q495Y8 402 aa11.47□□□□□ -0.57
COL4A3BP-202ENST00000357457 MCM10Q7L590 875 aa11.47□□□□□ -0.57
COL4A3BP-202ENST00000357457 RTKN2Q8IZC4 609 aa11.47□□□□□ -0.57
COL4A3BP-202ENST00000357457 RTF1Q92541 710 aaKnown RBP11.47□□□□□ -0.57
COL4A3BP-202ENST00000357457 CFAP53Q96M91 514 aa11.47□□□□□ -0.57
COL4A3BP-202ENST00000357457 MKRN1Q9UHC7 482 aaKnown RBP11.47□□□□□ -0.57
COL4A3BP-202ENST00000357457 NIP7Q9Y221 180 aaKnown RBP eCLIP11.47□□□□□ -0.57
COL4A3BP-202ENST00000357457 NUDCQ9Y266 331 aa11.47□□□□□ -0.57
COL4A3BP-202ENST00000357457 FZD9O00144 591 aa11.46□□□□□ -0.57
COL4A3BP-202ENST00000357457 CNGB1Q14028 1251 aaPredicted RBP11.46□□□□□ -0.57
COL4A3BP-202ENST00000357457 TAF7Q15545 349 aaPredicted RBP11.46□□□□□ -0.57
COL4A3BP-202ENST00000357457 HLFQ16534 295 aa11.46□□□□□ -0.57
COL4A3BP-202ENST00000357457 ZNF277Q9NRM2 450 aaPredicted RBP11.46□□□□□ -0.57
COL4A3BP-202ENST00000357457 TMEM88BA6NKF7 163 aa11.45□□□□□ -0.58
COL4A3BP-202ENST00000357457 U2AF1L5P0DN76 240 aaPredicted RBP11.45□□□□□ -0.58
COL4A3BP-202ENST00000357457 U2AF1Q01081 240 aaKnown RBP eCLIP11.45□□□□□ -0.58
COL4A3BP-202ENST00000357457 OLFM4Q6UX06 510 aa11.45□□□□□ -0.58
COL4A3BP-202ENST00000357457 SYNE4Q8N205 404 aa11.45□□□□□ -0.58
COL4A3BP-202ENST00000357457 PRDM10Q9NQV6 1147 aa11.45□□□□□ -0.58
COL4A3BP-202ENST00000357457 HACL1Q9UJ83 578 aa11.45□□□□□ -0.58
COL4A3BP-202ENST00000357457 SNED1Q8TER0 1413 aa11.44□□□□□ -0.58
COL4A3BP-202ENST00000357457 NUP98P52948 1817 aa11.44□□□□□ -0.58
COL4A3BP-202ENST00000357457 ADAMTSL1Q8N6G6 1762 aa11.44□□□□□ -0.58
COL4A3BP-202ENST00000357457 ZNF541Q9H0D2 1346 aa11.44□□□□□ -0.58
COL4A3BP-202ENST00000357457 ERVV-1B6SEH8 477 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms