RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 C6orf163Q5TEZ5 329 aa13.22□□□□□ -0.29
SPTBN1-202ENST00000356805 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.22□□□□□ -0.295e-8■□□□□ 9.5
SPTBN1-202ENST00000356805 TTC31Q49AM3 519 aaPredicted RBP13.21□□□□□ -0.29
SPTBN1-202ENST00000356805 TCERG1LQ5VWI1 586 aa13.21□□□□□ -0.29
SPTBN1-202ENST00000356805 MAATS1Q7Z4T9 603 aa13.21□□□□□ -0.29
SPTBN1-202ENST00000356805 FERMT1Q9BQL6 677 aa13.21□□□□□ -0.29
SPTBN1-202ENST00000356805 PHAXQ9H814 394 aaKnown RBP13.21□□□□□ -0.29
SPTBN1-202ENST00000356805 TRMT1Q9NXH9 659 aaKnown RBP13.21□□□□□ -0.29
SPTBN1-202ENST00000356805 A0A1W2PRG0 241 aa13.21□□□□□ -0.29
SPTBN1-202ENST00000356805 CKAP4Q07065 602 aaKnown RBP13.21□□□□□ -0.29
SPTBN1-202ENST00000356805 CDK19Q9BWU1 502 aa13.21□□□□□ -0.29
SPTBN1-202ENST00000356805 USP25Q9UHP3 1055 aa13.21□□□□□ -0.29
SPTBN1-202ENST00000356805 RAB3IL1Q8TBN0 382 aa13.21□□□□□ -0.29
SPTBN1-202ENST00000356805 ZNF652Q9Y2D9 606 aa13.21□□□□□ -0.29
SPTBN1-202ENST00000356805 PRC1O43663 620 aa13.21□□□□□ -0.29
SPTBN1-202ENST00000356805 TBC1D32Q96NH3 1257 aa13.21□□□□□ -0.29
SPTBN1-202ENST00000356805 ALS2CR12Q96Q35 445 aa13.21□□□□□ -0.29
SPTBN1-202ENST00000356805 STARD3NLO95772 234 aa13.21□□□□□ -0.29
SPTBN1-202ENST00000356805 OTUD6BQ8N6M0 293 aa13.21□□□□□ -0.29
SPTBN1-202ENST00000356805 ANKRD50Q9ULJ7 1429 aa13.21□□□□□ -0.3
SPTBN1-202ENST00000356805 XRCC6P12956 609 aaKnown RBP eCLIP13.21□□□□□ -0.3
SPTBN1-202ENST00000356805 FERMT3Q86UX7 667 aa13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 SYNCQ9H7C4 482 aa13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 RBM28Q9NW13 759 aaKnown RBP13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 SSRP1Q08945 709 aaKnown RBP13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 A0A1B0GUA9 196 aa13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 HMGB1P09429 215 aaKnown RBP13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 BICD1Q96G01 975 aa13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 BAG4O95429 457 aaKnown RBP13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 CETN1Q12798 172 aa13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 CCDC144CPQ8IYA2 1237 aa13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 SLC12A7Q9Y666 1083 aa13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 CASKIN1Q8WXD9 1431 aa13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 EBAG9O00559 213 aa13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 MTIF2P46199 727 aaKnown RBP13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 PYM1Q9BRP8 204 aaKnown RBP13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 ABCC11Q96J66 1382 aa13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 LRPPRCP42704 1394 aaKnown RBP13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 NLRP5P59047 1200 aa13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 YEATS4O95619 227 aa13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 SLFN5Q08AF3 891 aa13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 C8orf76Q96K31 380 aa13.2□□□□□ -0.3
SPTBN1-202ENST00000356805 BMP2KLQ5H9B9 411 aa13.19□□□□□ -0.3
SPTBN1-202ENST00000356805 CEP112Q8N8E3 955 aa13.19□□□□□ -0.3
SPTBN1-202ENST00000356805 NSRP1Q9H0G5 558 aaKnown RBP13.19□□□□□ -0.3
SPTBN1-202ENST00000356805 RRS1Q15050 365 aaKnown RBP13.19□□□□□ -0.3
SPTBN1-202ENST00000356805 ANKS4BQ8N8V4 417 aa13.19□□□□□ -0.3
SPTBN1-202ENST00000356805 CNNM3Q8NE01 707 aa13.19□□□□□ -0.3
SPTBN1-202ENST00000356805 RGS22Q8NE09 1264 aa13.19□□□□□ -0.3
SPTBN1-202ENST00000356805 CCDC160A6NGH7 325 aa13.19□□□□□ -0.3
SPTBN1-202ENST00000356805 RPGRQ92834 1020 aaKnown RBP13.19□□□□□ -0.3
SPTBN1-202ENST00000356805 MXRA7P84157 204 aa13.19□□□□□ -0.3
SPTBN1-202ENST00000356805 CTCFLQ8NI51 663 aaPredicted RBP13.19□□□□□ -0.3
SPTBN1-202ENST00000356805 SREK1Q8WXA9 508 aaKnown RBP13.19□□□□□ -0.3
SPTBN1-202ENST00000356805 OPA1O60313 960 aa13.19□□□□□ -0.3
SPTBN1-202ENST00000356805 ALDH1L2Q3SY69 923 aa13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 MIS18AQ9NYP9 233 aa13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 AKAP2Q9Y2D5 859 aa13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 A0A087WZG4 1122 aa13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 SLU7O95391 586 aaKnown RBP13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 VAT1LQ9HCJ6 419 aa13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 JADE2Q9NQC1 790 aa13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 PSMC4P43686 418 aa13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 MAP3K9P80192 1104 aa13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 PRDM11Q9NQV5 511 aa13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 CPSF2Q9P2I0 782 aaKnown RBP13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 WDR97A6NE52 1622 aa13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 ISM2Q6H9L7 571 aa13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 BOLA2Q9H3K6 86 aa13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 A0A1B0GUL7 405 aa13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 RAB11FIP3O75154 756 aa13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 SETSIPP0DME0 302 aa13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 ZNF165P49910 485 aa13.18□□□□□ -0.3
SPTBN1-202ENST00000356805 CCDC196A0A1B0GTZ2 297 aa13.17□□□□□ -0.3
SPTBN1-202ENST00000356805 ZSCAN23Q3MJ62 389 aa13.17□□□□□ -0.3
SPTBN1-202ENST00000356805 LIMCH1Q9UPQ0 1083 aa13.17□□□□□ -0.3
SPTBN1-202ENST00000356805 ATP2C2O75185 946 aa13.17□□□□□ -0.3
SPTBN1-202ENST00000356805 CALML4Q96GE6 196 aa13.17□□□□□ -0.3
SPTBN1-202ENST00000356805 IQCA1Q86XH1 822 aa13.17□□□□□ -0.3
SPTBN1-202ENST00000356805 CCDC40Q4G0X9 1142 aa13.17□□□□□ -0.3
SPTBN1-202ENST00000356805 PTCD1O75127 700 aaKnown RBP13.17□□□□□ -0.3
SPTBN1-202ENST00000356805 VTI1AQ96AJ9 217 aa13.17□□□□□ -0.3
SPTBN1-202ENST00000356805 GOLIM4O00461 696 aa13.17□□□□□ -0.3
SPTBN1-202ENST00000356805 ACTN2P35609 894 aa13.17□□□□□ -0.3
SPTBN1-202ENST00000356805 PRPF40BQ6NWY9 871 aaKnown RBP13.17□□□□□ -0.3
SPTBN1-202ENST00000356805 CATIPQ7Z7H3 387 aa13.17□□□□□ -0.3
SPTBN1-202ENST00000356805 MYO1BO43795 1136 aa13.16□□□□□ -0.3
SPTBN1-202ENST00000356805 FAM200AQ8TCP9 573 aa13.16□□□□□ -0.3
SPTBN1-202ENST00000356805 RSRC1Q96IZ7 334 aaKnown RBP13.16□□□□□ -0.3
SPTBN1-202ENST00000356805 CCT2P78371 535 aaKnown RBP13.16□□□□□ -0.3
SPTBN1-202ENST00000356805 DAAM2Q86T65 1068 aa13.16□□□□□ -0.3
SPTBN1-202ENST00000356805 SNX21Q969T3 373 aa13.16□□□□□ -0.3
SPTBN1-202ENST00000356805 CCDC194A0A1B0GVG4 234 aa13.16□□□□□ -0.3
SPTBN1-202ENST00000356805 KANK3Q6NY19 840 aa13.16□□□□□ -0.3
SPTBN1-202ENST00000356805 ARFGAP2Q8N6H7 521 aa13.16□□□□□ -0.3
SPTBN1-202ENST00000356805 STMN4Q9H169 189 aaPredicted RBP13.16□□□□□ -0.3
SPTBN1-202ENST00000356805 GRM1Q13255 1194 aa13.16□□□□□ -0.3
SPTBN1-202ENST00000356805 HSF2BPO75031 334 aa13.16□□□□□ -0.3
SPTBN1-202ENST00000356805 EXOC6BQ9Y2D4 811 aa13.16□□□□□ -0.3
SPTBN1-202ENST00000356805 ATAD2Q6PL18 1390 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms