RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 WDR66Q8TBY9 1149 aa12.69□□□□□ -0.38
GTF3C1-201ENST00000356183 PRC1O43663 620 aa12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 BAG4O95429 457 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 ATF3P18847 181 aa12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 SULT6B1Q6IMI4 303 aa12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 PDIA4P13667 645 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 TNIP1Q15025 636 aa12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 AQRO60306 1485 aaKnown RBP eCLIP12.68□□□□□ -0.385e-7■■■■■ 29.6
GTF3C1-201ENST00000356183 CAPN2P17655 700 aa12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 CKAP4Q07065 602 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 RRAGDQ9NQL2 400 aaPredicted RBP12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 STRN4Q9NRL3 753 aa12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 PLEKHH1Q9ULM0 1364 aa12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 CEP83Q9Y592 693 aa12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 FEZ1Q99689 392 aa12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 PUF60Q9UHX1 559 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 CCDC171Q6TFL3 1326 aa12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 PSMC4P43686 418 aa12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 UVSSAQ2YD98 709 aa12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 ANKS4BQ8N8V4 417 aa12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 CCDC40Q4G0X9 1142 aa12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 GIMAP6Q6P9H5 292 aa12.68□□□□□ -0.38
GTF3C1-201ENST00000356183 GOLGA6L9A6NEM1 432 aa12.67□□□□□ -0.38
GTF3C1-201ENST00000356183 NOL3O60936 208 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-201ENST00000356183 NAA25Q14CX7 972 aa12.67□□□□□ -0.38
GTF3C1-201ENST00000356183 SMIM23A6NLE4 172 aa12.67□□□□□ -0.38
GTF3C1-201ENST00000356183 HS1BP3Q53T59 392 aa12.67□□□□□ -0.38
GTF3C1-201ENST00000356183 DNAJC21Q5F1R6 531 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-201ENST00000356183 TMCO4Q5TGY1 634 aa12.67□□□□□ -0.38
GTF3C1-201ENST00000356183 DNAI2Q9GZS0 605 aa12.67□□□□□ -0.38
GTF3C1-201ENST00000356183 LRPPRCP42704 1394 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-201ENST00000356183 PPP4R3AQ6IN85 833 aa12.67□□□□□ -0.38
GTF3C1-201ENST00000356183 ZKSCAN5Q9Y2L8 839 aa12.67□□□□□ -0.38
GTF3C1-201ENST00000356183 BOLA2Q9H3K6 86 aa12.67□□□□□ -0.38
GTF3C1-201ENST00000356183 ARFGAP3Q9NP61 516 aa12.67□□□□□ -0.38
GTF3C1-201ENST00000356183 NKTRP30414 1462 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-201ENST00000356183 TCERG1LQ5VWI1 586 aa12.67□□□□□ -0.38
GTF3C1-201ENST00000356183 U3KPZ7 1027 aaPredicted RBP12.67□□□□□ -0.38
GTF3C1-201ENST00000356183 HSP90AA4PQ58FG1 418 aa12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 OTUD6BQ8N6M0 293 aa12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 BTBD11A6QL63 1104 aa12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 NLRP5P59047 1200 aa12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 TPD52P55327 224 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 KIAA0753Q2KHM9 967 aa12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 NOLC1Q14978 699 aaKnown RBP eCLIP12.66□□□□□ -0.389e-10■□□□□ 10.8
GTF3C1-201ENST00000356183 DDX19AQ9NUU7 478 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 KIAA1107Q9UPP5 1409 aa12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 EHBP1L1Q8N3D4 1523 aa12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 TOP2BQ02880 1626 aa12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 TMEM110-MUSTN1A8MSY1 372 aa12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 PPFIA3O75145 1194 aa12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 MX1P20591 662 aa12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 CCDC129Q6ZRS4 1044 aa12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 CCDC63Q8NA47 563 aa12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 PHAXQ9H814 394 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 DNAI1Q9UI46 699 aa12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 SLC12A7Q9Y666 1083 aa12.66□□□□□ -0.38
GTF3C1-201ENST00000356183 FAM160A1Q05DH4 1040 aa12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 TMEM266Q2M3C6 531 aa12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 TRMT1LQ7Z2T5 733 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 RGS22Q8NE09 1264 aa12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 ABCF2Q9UG63 623 aa12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 ARID4AP29374 1257 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 ARL1P40616 181 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 CFAP58Q5T655 872 aa12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 KRBA2Q6ZNG9 492 aa12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 DDX46Q7L014 1031 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 CAPZA3Q96KX2 299 aa12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 POLR3DP05423 398 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 NCOA1Q15788 1441 aa12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 OPA1O60313 960 aa12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 LRSAM1Q6UWE0 723 aa12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 CPSF2Q9P2I0 782 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 ZEB2O60315 1214 aa12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 GBP6Q6ZN66 633 aa12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 SH2B1Q9NRF2 756 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 MIS18AQ9NYP9 233 aa12.65□□□□□ -0.38
GTF3C1-201ENST00000356183 GOLGA8BA8MQT2 603 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 UBASH3AP57075 661 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 ANO6Q4KMQ2 910 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 CTAGE15A4D2H0 777 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 CTAGE8P0CG41 777 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 C8orf34Q49A92 452 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 CTAGE6Q86UF2 777 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 CTAGE4Q8IX94 777 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 MKNK2Q9HBH9 465 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 MAP3K1Q13233 1512 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 KRT13P13646 458 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 TATP17735 454 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 KIF5BP33176 963 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 IQCGQ9H095 443 aaKnown RBP12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 CFTRP13569 1480 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 RAB11FIP3O75154 756 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 HCLS1P14317 486 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 ZBTB16Q05516 673 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 BICDL1Q6ZP65 573 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 RAB11FIP4Q86YS3 637 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 RAB3IL1Q8TBN0 382 aa12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 RSRC1Q96IZ7 334 aaKnown RBP12.64□□□□□ -0.39
GTF3C1-201ENST00000356183 CCDC114Q96M63 670 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms