RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 SPATA31A5Q5VU36 1347 aa31.73■■■□□ 2.67
CLK2-201ENST00000355560 SPATA31A7Q8IWB4 1347 aa31.73■■■□□ 2.67
CLK2-201ENST00000355560 RAB11FIP3O75154 756 aa31.73■■■□□ 2.67
CLK2-201ENST00000355560 PDE1AP54750 535 aa31.73■■■□□ 2.67
CLK2-201ENST00000355560 OSBPL3Q9H4L5 887 aa31.73■■■□□ 2.67
CLK2-201ENST00000355560 CDC45O75419 566 aa31.72■■■□□ 2.67
CLK2-201ENST00000355560 DOT1LQ8TEK3 1739 aa31.72■■■□□ 2.67
CLK2-201ENST00000355560 DDB1Q16531 1140 aa31.72■■■□□ 2.67
CLK2-201ENST00000355560 CCDC9Q9Y3X0 531 aaKnown RBP31.72■■■□□ 2.67
CLK2-201ENST00000355560 SALL3Q9BXA9 1300 aa31.71■■■□□ 2.67
CLK2-201ENST00000355560 SYTL4Q96C24 671 aaPredicted RBP31.71■■■□□ 2.67
CLK2-201ENST00000355560 KAZALD1Q96I82 304 aa31.71■■■□□ 2.67
CLK2-201ENST00000355560 C22orf23Q9BZE7 217 aa31.71■■■□□ 2.67
CLK2-201ENST00000355560 VSIG10Q8N0Z9 540 aa31.7■■■□□ 2.67
CLK2-201ENST00000355560 NUP188Q5SRE5 1749 aa31.7■■■□□ 2.67
CLK2-201ENST00000355560 BICC1Q9H694 974 aaKnown RBP31.7■■■□□ 2.66
CLK2-201ENST00000355560 TTLL7Q6ZT98 887 aa31.69■■■□□ 2.66
CLK2-201ENST00000355560 IL1RAPL2Q9NP60 686 aa31.69■■■□□ 2.66
CLK2-201ENST00000355560 JCADQ9P266 1359 aa31.69■■■□□ 2.66
CLK2-201ENST00000355560 MX1P20591 662 aa31.69■■■□□ 2.66
CLK2-201ENST00000355560 RHPN1Q8TCX5 695 aa31.69■■■□□ 2.66
CLK2-201ENST00000355560 RBM42Q9BTD8 480 aaKnown RBP31.69■■■□□ 2.66
CLK2-201ENST00000355560 HSP90AB4PQ58FF6 505 aa31.68■■■□□ 2.66
CLK2-201ENST00000355560 ATP5J2-PTCD1G3V325 749 aa31.67■■■□□ 2.66
CLK2-201ENST00000355560 SDSP20132 328 aa31.67■■■□□ 2.66
CLK2-201ENST00000355560 DNAJC10Q8IXB1 793 aa31.67■■■□□ 2.66
CLK2-201ENST00000355560 KIF1BPQ96EK5 621 aa31.67■■■□□ 2.66
CLK2-201ENST00000355560 TEX13AQ9BXU3 409 aaPredicted RBP31.67■■■□□ 2.66
CLK2-201ENST00000355560 DAXXQ9UER7 740 aaPredicted RBP31.67■■■□□ 2.66
CLK2-201ENST00000355560 SLC4A3P48751 1232 aa31.66■■■□□ 2.66
CLK2-201ENST00000355560 TSHZ3Q63HK5 1081 aa31.66■■■□□ 2.66
CLK2-201ENST00000355560 BARGINQ6ZT62 677 aa31.65■■■□□ 2.66
CLK2-201ENST00000355560 PRIM1P49642 420 aaKnown RBP31.64■■■□□ 2.66
CLK2-201ENST00000355560 OS9Q13438 667 aaPredicted RBP31.64■■■□□ 2.66
CLK2-201ENST00000355560 C8orf37Q96NL8 207 aa31.64■■■□□ 2.66
CLK2-201ENST00000355560 UNC5CLQ8IV45 518 aa31.63■■■□□ 2.65
CLK2-201ENST00000355560 STARD3NLO95772 234 aa31.63■■■□□ 2.65
CLK2-201ENST00000355560 ANP32EQ9BTT0 268 aa31.63■■■□□ 2.65
CLK2-201ENST00000355560 ZBTB3Q9H5J0 574 aa31.63■■■□□ 2.65
CLK2-201ENST00000355560 TUBGCP6Q96RT7 1819 aa31.62■■■□□ 2.65
CLK2-201ENST00000355560 UBE3BQ7Z3V4 1068 aa31.62■■■□□ 2.65
CLK2-201ENST00000355560 PA2G4Q9UQ80 394 aaKnown RBP31.62■■■□□ 2.65
CLK2-201ENST00000355560 STAP2Q9UGK3 403 aa31.61■■■□□ 2.65
CLK2-201ENST00000355560 A0A087WZG4 1122 aa31.61■■■□□ 2.65
CLK2-201ENST00000355560 JARID2Q92833 1246 aaPredicted RBP31.61■■■□□ 2.65
CLK2-201ENST00000355560 NGLY1Q96IV0 654 aa31.61■■■□□ 2.65
CLK2-201ENST00000355560 ZNF330Q9Y3S2 320 aaPredicted RBP31.61■■■□□ 2.65
CLK2-201ENST00000355560 MARCH10Q8NA82 808 aaPredicted RBP31.6■■■□□ 2.65
CLK2-201ENST00000355560 EPHA10Q5JZY3 1008 aa31.6■■■□□ 2.65
CLK2-201ENST00000355560 NUTM1Q86Y26 1132 aa31.6■■■□□ 2.65
CLK2-201ENST00000355560 SLC4A9Q96Q91 983 aa31.6■■■□□ 2.65
CLK2-201ENST00000355560 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.59■■■□□ 2.65
CLK2-201ENST00000355560 BCL9LQ86UU0 1499 aa31.59■■■□□ 2.65
CLK2-201ENST00000355560 RBM25P49756 843 aaKnown RBP31.58■■■□□ 2.65
CLK2-201ENST00000355560 COL15A1P39059 1388 aa31.58■■■□□ 2.65
CLK2-201ENST00000355560 AOX1Q06278 1338 aa31.58■■■□□ 2.65
CLK2-201ENST00000355560 CASC1Q6TDU7 716 aa31.57■■■□□ 2.64
CLK2-201ENST00000355560 ERC1Q8IUD2 1116 aa31.57■■■□□ 2.64
CLK2-201ENST00000355560 A0A0G2JS52 829 aa31.57■■■□□ 2.64
CLK2-201ENST00000355560 TJP1Q07157 1748 aa31.56■■■□□ 2.64
CLK2-201ENST00000355560 CWC25Q9NXE8 425 aaPredicted RBP31.56■■■□□ 2.64
CLK2-201ENST00000355560 EIF5BO60841 1220 aaKnown RBP31.55■■■□□ 2.64
CLK2-201ENST00000355560 CASP7P55210 303 aa31.55■■■□□ 2.64
CLK2-201ENST00000355560 BECN1Q14457 450 aa31.55■■■□□ 2.64
CLK2-201ENST00000355560 ACSBG1Q96GR2 724 aa31.55■■■□□ 2.64
CLK2-201ENST00000355560 CYP19A1P11511 503 aaPredicted RBP31.54■■■□□ 2.64
CLK2-201ENST00000355560 VPS72Q15906 364 aa31.54■■■□□ 2.64
CLK2-201ENST00000355560 FAM98CQ17RN3 349 aaKnown RBP31.54■■■□□ 2.64
CLK2-201ENST00000355560 CLASRPQ8N2M8 674 aaKnown RBP31.54■■■□□ 2.64
CLK2-201ENST00000355560 RABL6Q3YEC7 729 aaPredicted RBP31.53■■■□□ 2.64
CLK2-201ENST00000355560 CERKQ8TCT0 537 aa31.53■■■□□ 2.64
CLK2-201ENST00000355560 SPATA31A6Q5VVP1 1343 aa31.53■■■□□ 2.64
CLK2-201ENST00000355560 KIF6Q6ZMV9 814 aa31.52■■■□□ 2.64
CLK2-201ENST00000355560 CCDC191Q8NCU4 936 aa31.52■■■□□ 2.64
CLK2-201ENST00000355560 H7C1W4 665 aa31.52■■■□□ 2.64
CLK2-201ENST00000355560 G3BP1Q13283 466 aaKnown RBP eCLIP31.52■■■□□ 2.64
CLK2-201ENST00000355560 TRIM6-TRIM34B2RNG4 842 aa31.51■■■□□ 2.63
CLK2-201ENST00000355560 KLHDC4Q8TBB5 520 aa31.51■■■□□ 2.63
CLK2-201ENST00000355560 SIL1Q9H173 461 aa31.51■■■□□ 2.63
CLK2-201ENST00000355560 FNBP4Q8N3X1 1017 aaPredicted RBP31.5■■■□□ 2.63
CLK2-201ENST00000355560 PI4K2BQ8TCG2 481 aa31.49■■■□□ 2.63
CLK2-201ENST00000355560 ZBTB1Q9Y2K1 713 aa31.49■■■□□ 2.63
CLK2-201ENST00000355560 RTL5Q5HYW3 569 aaPredicted RBP31.49■■■□□ 2.63
CLK2-201ENST00000355560 AEBP2Q6ZN18 517 aaPredicted RBP31.49■■■□□ 2.63
CLK2-201ENST00000355560 RILPL2Q969X0 211 aa31.49■■■□□ 2.63
CLK2-201ENST00000355560 SASH1O94885 1247 aa31.48■■■□□ 2.63
CLK2-201ENST00000355560 TCIRG1Q13488 830 aa31.48■■■□□ 2.63
CLK2-201ENST00000355560 ARXQ96QS3 562 aa31.48■■■□□ 2.63
CLK2-201ENST00000355560 ISCA1Q9BUE6 129 aa31.48■■■□□ 2.63
CLK2-201ENST00000355560 USP42Q9H9J4 1324 aaKnown RBP31.47■■■□□ 2.63
CLK2-201ENST00000355560 TBC1D2Q9BYX2 928 aa31.46■■■□□ 2.63
CLK2-201ENST00000355560 COPRSQ9NQ92 184 aa31.46■■■□□ 2.63
CLK2-201ENST00000355560 MAP3K15Q6ZN16 1313 aa31.46■■■□□ 2.63
CLK2-201ENST00000355560 RFX5P48382 616 aaPredicted RBP31.46■■■□□ 2.63
CLK2-201ENST00000355560 TTC41PQ6P2S7 1318 aa31.45■■■□□ 2.63
CLK2-201ENST00000355560 IFIT2P09913 472 aaKnown RBP31.45■■■□□ 2.62
CLK2-201ENST00000355560 FOXO4P98177 505 aa31.45■■■□□ 2.62
CLK2-201ENST00000355560 LMBR1LQ6UX01 489 aa31.45■■■□□ 2.62
CLK2-201ENST00000355560 AACSQ86V21 672 aa31.45■■■□□ 2.62
CLK2-201ENST00000355560 USP21Q9UK80 565 aa31.45■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms