RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 METTL22Q9BUU2 404 aaPredicted RBP13.53□□□□□ -0.24
SVIP-201ENST00000354193 NRKQ7Z2Y5 1582 aa13.53□□□□□ -0.24
SVIP-201ENST00000354193 LARP6Q9BRS8 491 aaKnown RBP13.53□□□□□ -0.24
SVIP-201ENST00000354193 GZF1Q9H116 711 aaPredicted RBP13.53□□□□□ -0.24
SVIP-201ENST00000354193 SNRKQ9NRH2 765 aa13.53□□□□□ -0.24
SVIP-201ENST00000354193 ANKRD26Q9UPS8 1709 aa13.53□□□□□ -0.24
SVIP-201ENST00000354193 ERVV-2B6SEH9 535 aa13.53□□□□□ -0.24
SVIP-201ENST00000354193 ZBTB1Q9Y2K1 713 aa13.53□□□□□ -0.24
SVIP-201ENST00000354193 NEURL1BA8MQ27 555 aa13.52□□□□□ -0.24
SVIP-201ENST00000354193 ALDH1L1O75891 902 aa13.52□□□□□ -0.24
SVIP-201ENST00000354193 UPF3BQ9BZI7 483 aaKnown RBP13.52□□□□□ -0.24
SVIP-201ENST00000354193 ERC2O15083 957 aa13.52□□□□□ -0.24
SVIP-201ENST00000354193 FRAT2O75474 233 aaPredicted RBP13.52□□□□□ -0.24
SVIP-201ENST00000354193 GSPT1P15170 499 aaKnown RBP13.52□□□□□ -0.24
SVIP-201ENST00000354193 FKBP4Q02790 459 aaKnown RBP eCLIP13.52□□□□□ -0.24
SVIP-201ENST00000354193 CEMIPQ8WUJ3 1361 aa13.52□□□□□ -0.24
SVIP-201ENST00000354193 NCLP19338 710 aaKnown RBP13.52□□□□□ -0.25
SVIP-201ENST00000354193 DZIP3Q86Y13 1208 aaKnown RBP13.52□□□□□ -0.25
SVIP-201ENST00000354193 SYNE4Q8N205 404 aa13.52□□□□□ -0.25
SVIP-201ENST00000354193 NBPF26B4DH59 902 aa13.51□□□□□ -0.25
SVIP-201ENST00000354193 IGKV5-2P06315 115 aa13.51□□□□□ -0.25
SVIP-201ENST00000354193 NBPF14Q5TI25 921 aa13.51□□□□□ -0.25
SVIP-201ENST00000354193 NBPF10Q6P3W6 841 aaKnown RBP13.51□□□□□ -0.25
SVIP-201ENST00000354193 CNTROBQ8N137 903 aa13.51□□□□□ -0.25
SVIP-201ENST00000354193 NBPF15Q8N660 670 aa13.51□□□□□ -0.25
SVIP-201ENST00000354193 HELBQ8NG08 1087 aaPredicted RBP13.51□□□□□ -0.25
SVIP-201ENST00000354193 NEK4P51957 841 aa13.51□□□□□ -0.25
SVIP-201ENST00000354193 DTNBO60941 627 aa13.51□□□□□ -0.25
SVIP-201ENST00000354193 HCLS1P14317 486 aaPredicted RBP13.5□□□□□ -0.25
SVIP-201ENST00000354193 TIMM10P62072 90 aa13.5□□□□□ -0.25
SVIP-201ENST00000354193 EPHA10Q5JZY3 1008 aa13.5□□□□□ -0.25
SVIP-201ENST00000354193 PLBD2Q8NHP8 589 aa13.5□□□□□ -0.25
SVIP-201ENST00000354193 EDC3Q96F86 508 aaKnown RBP13.5□□□□□ -0.25
SVIP-201ENST00000354193 CEP126Q9P2H0 1117 aa13.5□□□□□ -0.25
SVIP-201ENST00000354193 DCCP43146 1447 aa13.5□□□□□ -0.25
SVIP-201ENST00000354193 TBC1D32Q96NH3 1257 aa13.49□□□□□ -0.25
SVIP-201ENST00000354193 ATG3Q9NT62 314 aa13.49□□□□□ -0.25
SVIP-201ENST00000354193 ERC1Q8IUD2 1116 aa13.49□□□□□ -0.25
SVIP-201ENST00000354193 TBC1D2Q9BYX2 928 aa13.49□□□□□ -0.25
SVIP-201ENST00000354193 ADCY9O60503 1353 aa13.48□□□□□ -0.25
SVIP-201ENST00000354193 WASHC4Q2M389 1173 aa13.48□□□□□ -0.25
SVIP-201ENST00000354193 RAB11FIP3O75154 756 aa13.48□□□□□ -0.25
SVIP-201ENST00000354193 TFCP2Q12800 502 aa13.48□□□□□ -0.25
SVIP-201ENST00000354193 LDHAL6AQ6ZMR3 332 aa13.48□□□□□ -0.25
SVIP-201ENST00000354193 UNC5CLQ8IV45 518 aa13.48□□□□□ -0.25
SVIP-201ENST00000354193 IFIT5Q13325 482 aaKnown RBP13.48□□□□□ -0.25
SVIP-201ENST00000354193 DDX46Q7L014 1031 aaKnown RBP13.48□□□□□ -0.25
SVIP-201ENST00000354193 METTL24Q5JXM2 366 aa13.47□□□□□ -0.25
SVIP-201ENST00000354193 TEX13AQ9BXU3 409 aaPredicted RBP13.47□□□□□ -0.25
SVIP-201ENST00000354193 NIP7Q9Y221 180 aaKnown RBP eCLIP13.47□□□□□ -0.25
SVIP-201ENST00000354193 HEG1Q9ULI3 1381 aa13.47□□□□□ -0.25
SVIP-201ENST00000354193 MPHOSPH8Q99549 860 aa13.47□□□□□ -0.25
SVIP-201ENST00000354193 ECHDC1Q9NTX5 307 aa13.47□□□□□ -0.25
SVIP-201ENST00000354193 ST18O60284 1047 aa13.47□□□□□ -0.25
SVIP-201ENST00000354193 HSPA1LP34931 641 aa13.47□□□□□ -0.25
SVIP-201ENST00000354193 STK11IPQ8N1F8 1099 aa13.47□□□□□ -0.25
SVIP-201ENST00000354193 SSH3Q8TE77 659 aa13.47□□□□□ -0.25
SVIP-201ENST00000354193 IQSEC3Q9UPP2 1182 aaPredicted RBP13.47□□□□□ -0.25
SVIP-201ENST00000354193 KDM6AO15550 1401 aaPredicted RBP13.47□□□□□ -0.25
SVIP-201ENST00000354193 PDIA6Q15084 440 aa13.47□□□□□ -0.25
SVIP-201ENST00000354193 GLRX3O76003 335 aaKnown RBP13.46□□□□□ -0.25
SVIP-201ENST00000354193 NFAT5O94916 1531 aa13.46□□□□□ -0.25
SVIP-201ENST00000354193 HLFQ16534 295 aa13.46□□□□□ -0.25
SVIP-201ENST00000354193 DLG5Q8TDM6 1919 aa13.46□□□□□ -0.25
SVIP-201ENST00000354193 LOC102724428A0A0B4J2F2 783 aa13.46□□□□□ -0.26
SVIP-201ENST00000354193 SIK1P57059 783 aa13.46□□□□□ -0.26
SVIP-201ENST00000354193 APPP05067 770 aa13.45□□□□□ -0.26
SVIP-201ENST00000354193 CAMTA1Q9Y6Y1 1673 aa13.45□□□□□ -0.26
SVIP-201ENST00000354193 MARCH10Q8NA82 808 aaPredicted RBP13.45□□□□□ -0.26
SVIP-201ENST00000354193 TLR7Q9NYK1 1049 aaKnown RBP13.45□□□□□ -0.26
SVIP-201ENST00000354193 EAF2Q96CJ1 260 aaPredicted RBP13.45□□□□□ -0.26
SVIP-201ENST00000354193 CPDO75976 1380 aa13.45□□□□□ -0.26
SVIP-201ENST00000354193 NCOA3Q9Y6Q9 1424 aa13.44□□□□□ -0.26
SVIP-201ENST00000354193 TOPAZ1Q8N9V7 1692 aa13.44□□□□□ -0.26
SVIP-201ENST00000354193 GOLIM4O00461 696 aa13.44□□□□□ -0.26
SVIP-201ENST00000354193 RUFY2Q8WXA3 655 aa13.44□□□□□ -0.26
SVIP-201ENST00000354193 DBNDD2Q9BQY9 259 aa13.44□□□□□ -0.26
SVIP-201ENST00000354193 TOMM22Q9NS69 142 aa13.44□□□□□ -0.26
SVIP-201ENST00000354193 ZNF142P52746 1687 aaPredicted RBP13.44□□□□□ -0.26
SVIP-201ENST00000354193 IRS4O14654 1257 aaPredicted RBP13.44□□□□□ -0.26
SVIP-201ENST00000354193 GNPATO15228 680 aa13.44□□□□□ -0.26
SVIP-201ENST00000354193 HSP90AB3PQ58FF7 597 aa13.44□□□□□ -0.26
SVIP-201ENST00000354193 NFKBIBQ15653 356 aa13.44□□□□□ -0.26
SVIP-201ENST00000354193 VPS37DQ86XT2 251 aa13.44□□□□□ -0.26
SVIP-201ENST00000354193 PUS3Q9BZE2 481 aaKnown RBP13.44□□□□□ -0.26
SVIP-201ENST00000354193 ZPR1O75312 459 aa13.43□□□□□ -0.26
SVIP-201ENST00000354193 LTN1O94822 1766 aa13.43□□□□□ -0.26
SVIP-201ENST00000354193 LRRC24Q50LG9 513 aa13.43□□□□□ -0.26
SVIP-201ENST00000354193 TTC39AQ5SRH9 613 aa13.43□□□□□ -0.26
SVIP-201ENST00000354193 TCEANC2Q96MN5 208 aa13.43□□□□□ -0.26
SVIP-201ENST00000354193 MED1Q15648 1581 aaPredicted RBP13.42□□□□□ -0.26
SVIP-201ENST00000354193 CRKLP46109 303 aaKnown RBP13.42□□□□□ -0.26
SVIP-201ENST00000354193 COL5A2P05997 1499 aaPredicted RBP13.42□□□□□ -0.26
SVIP-201ENST00000354193 TCIRG1Q13488 830 aa13.42□□□□□ -0.26
SVIP-201ENST00000354193 QTRT2Q9H974 415 aaKnown RBP13.42□□□□□ -0.26
SVIP-201ENST00000354193 CCNL1Q9UK58 526 aaPredicted RBP13.42□□□□□ -0.26
SVIP-201ENST00000354193 SNAP23O00161 211 aa13.42□□□□□ -0.26
SVIP-201ENST00000354193 IDH1O75874 414 aaKnown RBP13.42□□□□□ -0.26
SVIP-201ENST00000354193 IFIT1P09914 478 aaKnown RBP13.42□□□□□ -0.26
SVIP-201ENST00000354193 PRPF40BQ6NWY9 871 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms