RNA–Protein interactions for RNA: ENST00000353334.10

CD74-202, Transcript of CD74 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD74, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-202ENST00000353334 CTCFP49711 727 aaPredicted RBP17.41■□□□□ 0.38
CD74-202ENST00000353334 PRPF40BQ6NWY9 871 aaKnown RBP17.41■□□□□ 0.38
CD74-202ENST00000353334 AIDAQ96BJ3 306 aa17.41■□□□□ 0.38
CD74-202ENST00000353334 A0A087WZG4 1122 aa17.4■□□□□ 0.38
CD74-202ENST00000353334 MTHFSDQ2M296 383 aaKnown RBP17.4■□□□□ 0.38
CD74-202ENST00000353334 LDHDQ86WU2 507 aa17.4■□□□□ 0.38
CD74-202ENST00000353334 TAF1DQ9H5J8 278 aaPredicted RBP17.4■□□□□ 0.38
CD74-202ENST00000353334 SLC34A2O95436 690 aa17.39■□□□□ 0.38
CD74-202ENST00000353334 STARD3NLO95772 234 aa17.39■□□□□ 0.38
CD74-202ENST00000353334 DEKP35659 375 aaKnown RBP17.39■□□□□ 0.38
CD74-202ENST00000353334 LBX1P52954 281 aa17.39■□□□□ 0.38
CD74-202ENST00000353334 CNBD1Q8NA66 436 aa17.39■□□□□ 0.38
CD74-202ENST00000353334 PDZRN3Q9UPQ7 1066 aa17.39■□□□□ 0.38
CD74-202ENST00000353334 BCORQ6W2J9 1755 aa17.39■□□□□ 0.37
CD74-202ENST00000353334 ADAMTSL1Q8N6G6 1762 aa17.39■□□□□ 0.37
CD74-202ENST00000353334 IQCA1LA6NCM1 817 aa17.38■□□□□ 0.37
CD74-202ENST00000353334 TMEM88BA6NKF7 163 aa17.38■□□□□ 0.37
CD74-202ENST00000353334 ZNF496Q96IT1 587 aaPredicted RBP17.38■□□□□ 0.37
CD74-202ENST00000353334 L3MBTL3Q96JM7 780 aaPredicted RBP17.38■□□□□ 0.37
CD74-202ENST00000353334 ZNF541Q9H0D2 1346 aa17.38■□□□□ 0.37
CD74-202ENST00000353334 ITGBL1O95965 494 aaPredicted RBP17.38■□□□□ 0.37
CD74-202ENST00000353334 SRGNP10124 158 aa17.38■□□□□ 0.37
CD74-202ENST00000353334 EAPPQ56P03 285 aaPredicted RBP17.38■□□□□ 0.37
CD74-202ENST00000353334 STYK1Q6J9G0 422 aa17.38■□□□□ 0.37
CD74-202ENST00000353334 TTC5Q8N0Z6 440 aa17.38■□□□□ 0.37
CD74-202ENST00000353334 CNKSR1Q969H4 720 aa17.38■□□□□ 0.37
CD74-202ENST00000353334 WBP1LQ9NX94 342 aa17.38■□□□□ 0.37
CD74-202ENST00000353334 KIF7Q2M1P5 1343 aa17.37■□□□□ 0.37
CD74-202ENST00000353334 SIPA1L3O60292 1781 aaPredicted RBP17.37■□□□□ 0.37
CD74-202ENST00000353334 NPHP1O15259 732 aa17.37■□□□□ 0.37
CD74-202ENST00000353334 HEG1Q9ULI3 1381 aa17.36■□□□□ 0.37
CD74-202ENST00000353334 FAM161AQ3B820 660 aa17.36■□□□□ 0.37
CD74-202ENST00000353334 CAMTA2O94983 1202 aa17.35■□□□□ 0.37
CD74-202ENST00000353334 HSPA8P11142 646 aaKnown RBP17.35■□□□□ 0.37
CD74-202ENST00000353334 ABHD8Q96I13 439 aa17.35■□□□□ 0.37
CD74-202ENST00000353334 SETDB2Q96T68 719 aa17.35■□□□□ 0.37
CD74-202ENST00000353334 A1BGP04217 495 aa17.34■□□□□ 0.37
CD74-202ENST00000353334 ST5P78524 1137 aa17.34■□□□□ 0.37
CD74-202ENST00000353334 SOGA3Q5TF21 947 aa17.34■□□□□ 0.37
CD74-202ENST00000353334 OLFM4Q6UX06 510 aa17.34■□□□□ 0.37
CD74-202ENST00000353334 C7orf43Q8WVR3 580 aa17.34■□□□□ 0.37
CD74-202ENST00000353334 MASTLQ96GX5 879 aa17.34■□□□□ 0.37
CD74-202ENST00000353334 ZNF277Q9NRM2 450 aaPredicted RBP17.34■□□□□ 0.37
CD74-202ENST00000353334 CLEC11AQ9Y240 323 aa17.34■□□□□ 0.37
CD74-202ENST00000353334 KNSTRNQ9Y448 316 aa17.34■□□□□ 0.37
CD74-202ENST00000353334 IL6STP40189 918 aaPredicted RBP17.33■□□□□ 0.36
CD74-202ENST00000353334 ZNF790Q6PG37 636 aa17.33■□□□□ 0.36
CD74-202ENST00000353334 HACL1Q9UJ83 578 aa17.33■□□□□ 0.36
CD74-202ENST00000353334 CCDC93Q567U6 631 aa17.32■□□□□ 0.36
CD74-202ENST00000353334 MAP1SQ66K74 1059 aaPredicted RBP17.32■□□□□ 0.36
CD74-202ENST00000353334 RNF123Q5XPI4 1314 aa17.31■□□□□ 0.36
CD74-202ENST00000353334 RASSF10A6NK89 507 aa17.31■□□□□ 0.36
CD74-202ENST00000353334 EPHX2P34913 555 aa17.31■□□□□ 0.36
CD74-202ENST00000353334 PIP4K2AP48426 406 aaPredicted RBP17.31■□□□□ 0.36
CD74-202ENST00000353334 AMER1Q5JTC6 1135 aaPredicted RBP17.31■□□□□ 0.36
CD74-202ENST00000353334 FKBP4Q02790 459 aaKnown RBP eCLIP17.3■□□□□ 0.36
CD74-202ENST00000353334 TEFQ10587 303 aa17.3■□□□□ 0.36
CD74-202ENST00000353334 DZIP3Q86Y13 1208 aaKnown RBP17.3■□□□□ 0.36
CD74-202ENST00000353334 IL17REQ8NFR9 667 aa17.3■□□□□ 0.36
CD74-202ENST00000353334 TEX13AQ9BXU3 409 aaPredicted RBP17.3■□□□□ 0.36
CD74-202ENST00000353334 THSD7BQ9C0I4 1608 aa17.3■□□□□ 0.36
CD74-202ENST00000353334 WDR33Q9C0J8 1336 aaKnown RBP17.3■□□□□ 0.36
CD74-202ENST00000353334 DEFB115Q30KQ5 88 aa17.3■□□□□ 0.36
CD74-202ENST00000353334 NBPF5PQ86XG9 351 aaPredicted RBP17.3■□□□□ 0.36
CD74-202ENST00000353334 CNTROBQ8N137 903 aa17.3■□□□□ 0.36
CD74-202ENST00000353334 KCNQ3O43525 872 aa17.29■□□□□ 0.36
CD74-202ENST00000353334 DIAPH1O60610 1272 aaKnown RBP17.29■□□□□ 0.36
CD74-202ENST00000353334 NEFLP07196 543 aa17.29■□□□□ 0.36
CD74-202ENST00000353334 NPR1P16066 1061 aa17.29■□□□□ 0.36
CD74-202ENST00000353334 FMNL2Q96PY5 1086 aa17.29■□□□□ 0.36
CD74-202ENST00000353334 ABT1Q9ULW3 272 aaKnown RBP17.29■□□□□ 0.36
CD74-202ENST00000353334 NPM2Q86SE8 214 aaKnown RBP17.28■□□□□ 0.36
CD74-202ENST00000353334 PRKRIP1Q9H875 184 aaPredicted RBP17.28■□□□□ 0.36
CD74-202ENST00000353334 LTBP1Q14766 1721 aa17.27■□□□□ 0.36
CD74-202ENST00000353334 COL4A5P29400 1685 aa17.27■□□□□ 0.36
CD74-202ENST00000353334 COL3A1P02461 1466 aaPredicted RBP17.27■□□□□ 0.36
CD74-202ENST00000353334 GNAT3A8MTJ3 354 aa17.27■□□□□ 0.35
CD74-202ENST00000353334 FMR1Q06787 632 aaKnown RBP eCLIP17.27■□□□□ 0.35
CD74-202ENST00000353334 PKNOX2Q96KN3 472 aa17.27■□□□□ 0.35
CD74-202ENST00000353334 PRAMEF22A3QJZ6 481 aa17.26■□□□□ 0.35
CD74-202ENST00000353334 MAP2K1Q02750 393 aaPredicted RBP17.26■□□□□ 0.35
CD74-202ENST00000353334 PNMA8AQ86V59 439 aaPredicted RBP17.26■□□□□ 0.35
CD74-202ENST00000353334 FZD9O00144 591 aa17.25■□□□□ 0.35
CD74-202ENST00000353334 IARSP41252 1262 aaKnown RBP17.25■□□□□ 0.35
CD74-202ENST00000353334 USP16Q9Y5T5 823 aa17.25■□□□□ 0.35
CD74-202ENST00000353334 KLRG2A4D1S0 409 aaPredicted RBP17.24■□□□□ 0.35
CD74-202ENST00000353334 CCDC85CA6NKD9 419 aa17.24■□□□□ 0.35
CD74-202ENST00000353334 FAM177BA6PVY3 158 aa17.24■□□□□ 0.35
CD74-202ENST00000353334 GRM1Q13255 1194 aa17.24■□□□□ 0.35
CD74-202ENST00000353334 GLIPR1L2Q4G1C9 344 aa17.24■□□□□ 0.35
CD74-202ENST00000353334 RTKN2Q8IZC4 609 aa17.24■□□□□ 0.35
CD74-202ENST00000353334 SYNE4Q8N205 404 aa17.24■□□□□ 0.35
CD74-202ENST00000353334 DDX21Q9NR30 783 aaKnown RBP eCLIP17.24■□□□□ 0.35
CD74-202ENST00000353334 SNED1Q8TER0 1413 aa17.24■□□□□ 0.35
CD74-202ENST00000353334 PAXIP1Q6ZW49 1069 aaPredicted RBP17.23■□□□□ 0.35
CD74-202ENST00000353334 GPC2Q8N158 579 aa17.23■□□□□ 0.35
CD74-202ENST00000353334 CAPNS2Q96L46 248 aa17.23■□□□□ 0.35
CD74-202ENST00000353334 CEMIPQ8WUJ3 1361 aa17.23■□□□□ 0.35
CD74-202ENST00000353334 U2SURPO15042 1029 aaKnown RBP17.22■□□□□ 0.35
CD74-202ENST00000353334 MLLT1Q03111 559 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms