RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 HS1BP3Q53T59 392 aa21.39■■□□□ 1.01
CTSB-202ENST00000353047 TOMM22Q9NS69 142 aa21.39■■□□□ 1.01
CTSB-202ENST00000353047 CEP152O94986 1710 aa21.38■■□□□ 1.01
CTSB-202ENST00000353047 LETM1O95202 739 aaPredicted RBP21.38■■□□□ 1.01
CTSB-202ENST00000353047 ZC3H6P61129 1189 aaKnown RBP21.38■■□□□ 1.01
CTSB-202ENST00000353047 NMIQ13287 307 aaPredicted RBP21.38■■□□□ 1.01
CTSB-202ENST00000353047 NLRP2Q9NX02 1062 aa21.38■■□□□ 1.01
CTSB-202ENST00000353047 SGSM2O43147 1006 aa21.38■■□□□ 1.01
CTSB-202ENST00000353047 PRR36Q9H6K5 1346 aa21.38■■□□□ 1.01
CTSB-202ENST00000353047 DDX46Q7L014 1031 aaKnown RBP21.38■■□□□ 1.01
CTSB-202ENST00000353047 IL17REQ8NFR9 667 aa21.38■■□□□ 1.01
CTSB-202ENST00000353047 LRRC7Q96NW7 1537 aa21.37■■□□□ 1.01
CTSB-202ENST00000353047 MCM5P33992 734 aa21.37■■□□□ 1.01
CTSB-202ENST00000353047 NAA30Q147X3 362 aaPredicted RBP21.37■■□□□ 1.01
CTSB-202ENST00000353047 LARP1Q6PKG0 1096 aaKnown RBP21.37■■□□□ 1.01
CTSB-202ENST00000353047 MTERF4Q7Z6M4 381 aaKnown RBP21.37■■□□□ 1.01
CTSB-202ENST00000353047 PSMA5P28066 241 aa21.37■■□□□ 1.01
CTSB-202ENST00000353047 TYRO3Q06418 890 aa21.37■■□□□ 1.01
CTSB-202ENST00000353047 ME3Q16798 604 aa21.37■■□□□ 1.01
CTSB-202ENST00000353047 METP08581 1390 aa21.37■■□□□ 1.01
CTSB-202ENST00000353047 LAMC1P11047 1609 aa21.37■■□□□ 1.01
CTSB-202ENST00000353047 ZFYVE9O95405 1425 aa21.36■■□□□ 1.01
CTSB-202ENST00000353047 JAK2O60674 1132 aa21.36■■□□□ 1.01
CTSB-202ENST00000353047 INTS4Q96HW7 963 aaKnown RBP21.36■■□□□ 1.01
CTSB-202ENST00000353047 HSPA4P34932 840 aa21.36■■□□□ 1.01
CTSB-202ENST00000353047 ZCCHC11Q5TAX3 1644 aaKnown RBP21.36■■□□□ 1.01
CTSB-202ENST00000353047 ANAPC15P60006 121 aa21.36■■□□□ 1.01
CTSB-202ENST00000353047 WASHC4Q2M389 1173 aa21.36■■□□□ 1.01
CTSB-202ENST00000353047 BCL2L12Q9HB09 334 aa21.36■■□□□ 1.01
CTSB-202ENST00000353047 KIF1BO60333 1816 aa21.36■■□□□ 1.01
CTSB-202ENST00000353047 NCOA3Q9Y6Q9 1424 aa21.36■■□□□ 1.01
CTSB-202ENST00000353047 HTATSF1O43719 755 aaKnown RBP21.35■■□□□ 1.01
CTSB-202ENST00000353047 KINO60870 393 aaKnown RBP21.35■■□□□ 1.01
CTSB-202ENST00000353047 BRF1Q92994 677 aa21.35■■□□□ 1.01
CTSB-202ENST00000353047 PIBF1Q8WXW3 757 aa21.35■■□□□ 1.01
CTSB-202ENST00000353047 PRAMEF22A3QJZ6 481 aa21.35■■□□□ 1.01
CTSB-202ENST00000353047 BRPF1P55201 1214 aaPredicted RBP21.35■■□□□ 1.01
CTSB-202ENST00000353047 PDLIM2Q96JY6 352 aa21.34■■□□□ 1.01
CTSB-202ENST00000353047 PIK3R4Q99570 1358 aa21.34■■□□□ 1.01
CTSB-202ENST00000353047 PDCP20941 246 aa21.34■■□□□ 1.01
CTSB-202ENST00000353047 PTCH1Q13635 1447 aa21.34■■□□□ 1.01
CTSB-202ENST00000353047 APPP05067 770 aa21.34■■□□□ 1.01
CTSB-202ENST00000353047 HAND2P61296 217 aa21.34■■□□□ 1.01
CTSB-202ENST00000353047 RNF17Q9BXT8 1623 aaKnown RBP21.33■■□□□ 1.01
CTSB-202ENST00000353047 SNRKQ9NRH2 765 aa21.33■■□□□ 1.01
CTSB-202ENST00000353047 MYOM1P52179 1685 aa21.33■■□□□ 1.01
CTSB-202ENST00000353047 POLR3DP05423 398 aaPredicted RBP21.33■■□□□ 1.01
CTSB-202ENST00000353047 CREB3L3Q68CJ9 461 aa21.33■■□□□ 1.01
CTSB-202ENST00000353047 CGNQ9P2M7 1197 aaKnown RBP21.33■■□□□ 1.01
CTSB-202ENST00000353047 TTC6Q86TZ1 520 aa21.33■■□□□ 1
CTSB-202ENST00000353047 MYD88Q99836 296 aa21.33■■□□□ 1
CTSB-202ENST00000353047 HSP90AB3PQ58FF7 597 aa21.32■■□□□ 1
CTSB-202ENST00000353047 MYRIPQ8NFW9 859 aa21.32■■□□□ 1
CTSB-202ENST00000353047 TET3O43151 1660 aa21.32■■□□□ 1
CTSB-202ENST00000353047 CPLX1O14810 134 aa21.32■■□□□ 1
CTSB-202ENST00000353047 CHMP4CQ96CF2 233 aa21.32■■□□□ 1
CTSB-202ENST00000353047 FKBP4Q02790 459 aaKnown RBP eCLIP21.32■■□□□ 1
CTSB-202ENST00000353047 NCBP3Q53F19 620 aaKnown RBP21.32■■□□□ 1
CTSB-202ENST00000353047 TAF7LQ5H9L4 462 aa21.32■■□□□ 1
CTSB-202ENST00000353047 RAD50Q92878 1312 aa21.32■■□□□ 1
CTSB-202ENST00000353047 QRICH2Q9H0J4 1663 aa21.32■■□□□ 1
CTSB-202ENST00000353047 FTOQ9C0B1 505 aaKnown RBP eCLIP21.31■■□□□ 13e-19■□□□□ 9.3
CTSB-202ENST00000353047 TPCN1Q9ULQ1 816 aa21.31■■□□□ 1
CTSB-202ENST00000353047 NRDCO43847 1150 aa21.31■■□□□ 1
CTSB-202ENST00000353047 CHGBP05060 677 aa21.31■■□□□ 1
CTSB-202ENST00000353047 CCDC94Q9BW85 323 aaPredicted RBP21.31■■□□□ 1
CTSB-202ENST00000353047 USP16Q9Y5T5 823 aa21.31■■□□□ 1
CTSB-202ENST00000353047 DDX58O95786 925 aaKnown RBP21.31■■□□□ 1
CTSB-202ENST00000353047 PPP6R1Q9UPN7 881 aa21.31■■□□□ 1
CTSB-202ENST00000353047 OTUD7BQ6GQQ9 843 aa21.3■■□□□ 1
CTSB-202ENST00000353047 FAM200AQ8TCP9 573 aa21.3■■□□□ 1
CTSB-202ENST00000353047 MTMR6Q9Y217 621 aa21.3■■□□□ 1
CTSB-202ENST00000353047 EFCAB6Q5THR3 1501 aa21.3■■□□□ 1
CTSB-202ENST00000353047 CHD1O14646 1710 aa21.3■■□□□ 1
CTSB-202ENST00000353047 SEC62Q99442 399 aaKnown RBP21.3■■□□□ 1
CTSB-202ENST00000353047 TLR7Q9NYK1 1049 aaKnown RBP21.3■■□□□ 1
CTSB-202ENST00000353047 CUL4AQ13619 759 aa21.3■■□□□ 1
CTSB-202ENST00000353047 TTLL5Q6EMB2 1281 aa21.3■■□□□ 1
CTSB-202ENST00000353047 ZSCAN31Q96LW9 406 aaPredicted RBP21.3■■□□□ 1
CTSB-202ENST00000353047 NCOA5Q9HCD5 579 aaKnown RBP21.3■■□□□ 1
CTSB-202ENST00000353047 PTPN21Q16825 1174 aa21.3■■□□□ 1
CTSB-202ENST00000353047 PROSER3Q2NL68 480 aa21.3■■□□□ 1
CTSB-202ENST00000353047 PDILTQ8N807 584 aa21.3■■□□□ 1
CTSB-202ENST00000353047 SLFNL1Q499Z3 407 aa21.29■■□□□ 1
CTSB-202ENST00000353047 UBE3BQ7Z3V4 1068 aa21.29■■□□□ 1
CTSB-202ENST00000353047 ARID5BQ14865 1188 aa21.28■■□□□ 1
CTSB-202ENST00000353047 SKIDA1Q1XH10 827 aa21.28■■□□□ 1
CTSB-202ENST00000353047 TTC5Q8N0Z6 440 aa21.28■■□□□ 1
CTSB-202ENST00000353047 PRIMPOLQ96LW4 560 aa21.28■■□□□ 1
CTSB-202ENST00000353047 CBX8Q9HC52 389 aa21.28■■□□□ 1
CTSB-202ENST00000353047 GLI2P10070 1586 aa21.28■■□□□ 1
CTSB-202ENST00000353047 EDC4Q6P2E9 1401 aaKnown RBP21.28■■□□□ 1
CTSB-202ENST00000353047 STK38Q15208 465 aa21.27■■□□□ 1
CTSB-202ENST00000353047 UVSSAQ2YD98 709 aa21.27■■□□□ 1
CTSB-202ENST00000353047 CCDC82Q8N4S0 544 aa21.27■■□□□ 1
CTSB-202ENST00000353047 PNPLA6Q8IY17 1366 aa21.27■■□□□ 1
CTSB-202ENST00000353047 NR1I2O75469 434 aa21.27■■□□□ 1
CTSB-202ENST00000353047 BICC1Q9H694 974 aaKnown RBP21.27■■□□□ 1
CTSB-202ENST00000353047 A0A0D9SFI3 127 aa21.27■□□□□ 0.99
CTSB-202ENST00000353047 Q6ZUG5 572 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms