RNA–Protein interactions for RNA: ENST00000350033.7

COPS7B-201, Transcript of COP9 signalosome subunit 7B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7B, Length 2,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-201ENST00000350033 XIRP1Q702N8 1843 aaKnown RBP16.33■□□□□ 0.21
COPS7B-201ENST00000350033 RAB11FIP3O75154 756 aa16.33■□□□□ 0.2
COPS7B-201ENST00000350033 BBXQ8WY36 941 aaPredicted RBP16.33■□□□□ 0.2
COPS7B-201ENST00000350033 KAZALD1Q96I82 304 aa16.33■□□□□ 0.2
COPS7B-201ENST00000350033 NCLP19338 710 aaKnown RBP16.33■□□□□ 0.2
COPS7B-201ENST00000350033 IFNL2Q8IZJ0 200 aa16.33■□□□□ 0.2
COPS7B-201ENST00000350033 ZGPATQ8N5A5 531 aaKnown RBP16.33■□□□□ 0.2
COPS7B-201ENST00000350033 XAGE3Q8WTP9 111 aa16.33■□□□□ 0.2
COPS7B-201ENST00000350033 KIF1BPQ96EK5 621 aa16.33■□□□□ 0.2
COPS7B-201ENST00000350033 IGKV5-2P06315 115 aa16.32■□□□□ 0.2
COPS7B-201ENST00000350033 PKP1Q13835 747 aa16.32■□□□□ 0.2
COPS7B-201ENST00000350033 NOL8Q76FK4 1167 aaKnown RBP16.32■□□□□ 0.2
COPS7B-201ENST00000350033 RIC3Q7Z5B4 369 aa16.32■□□□□ 0.2
COPS7B-201ENST00000350033 TRIM44Q96DX7 344 aaPredicted RBP16.32■□□□□ 0.2
COPS7B-201ENST00000350033 CHMP4AQ9BY43 222 aa16.32■□□□□ 0.2
COPS7B-201ENST00000350033 BICC1Q9H694 974 aaKnown RBP16.32■□□□□ 0.2
COPS7B-201ENST00000350033 DCCP43146 1447 aa16.31■□□□□ 0.2
COPS7B-201ENST00000350033 COPS6Q7L5N1 327 aa16.31■□□□□ 0.2
COPS7B-201ENST00000350033 KLHDC4Q8TBB5 520 aa16.31■□□□□ 0.2
COPS7B-201ENST00000350033 ALDH1L1O75891 902 aa16.3■□□□□ 0.2
COPS7B-201ENST00000350033 TAF7LQ5H9L4 462 aa16.3■□□□□ 0.2
COPS7B-201ENST00000350033 UTP14CQ5TAP6 766 aaKnown RBP16.3■□□□□ 0.2
COPS7B-201ENST00000350033 CIZ1Q9ULV3 898 aaPredicted RBP16.3■□□□□ 0.2
COPS7B-201ENST00000350033 GRM8O00222 908 aa16.3■□□□□ 0.2
COPS7B-201ENST00000350033 GTF2E1P29083 439 aaPredicted RBP16.3■□□□□ 0.2
COPS7B-201ENST00000350033 NEK4P51957 841 aa16.3■□□□□ 0.2
COPS7B-201ENST00000350033 GRPEL1Q9HAV7 217 aa16.3■□□□□ 0.2
COPS7B-201ENST00000350033 LINS1Q8NG48 757 aa16.29■□□□□ 0.2
COPS7B-201ENST00000350033 MYD88Q99836 296 aa16.29■□□□□ 0.2
COPS7B-201ENST00000350033 SIL1Q9H173 461 aa16.29■□□□□ 0.2
COPS7B-201ENST00000350033 MTERF4Q7Z6M4 381 aaKnown RBP16.29■□□□□ 0.2
COPS7B-201ENST00000350033 ZNF335Q9H4Z2 1342 aaPredicted RBP16.29■□□□□ 0.2
COPS7B-201ENST00000350033 ST18O60284 1047 aa16.28■□□□□ 0.2
COPS7B-201ENST00000350033 TTC5Q8N0Z6 440 aa16.28■□□□□ 0.2
COPS7B-201ENST00000350033 DDX58O95786 925 aaKnown RBP16.28■□□□□ 0.2
COPS7B-201ENST00000350033 CABP4P57796 275 aa16.28■□□□□ 0.2
COPS7B-201ENST00000350033 EPHA10Q5JZY3 1008 aa16.28■□□□□ 0.2
COPS7B-201ENST00000350033 DCAF5Q96JK2 942 aa16.28■□□□□ 0.2
COPS7B-201ENST00000350033 PRDM11Q9NQV5 511 aa16.28■□□□□ 0.2
COPS7B-201ENST00000350033 MTX1Q13505 466 aa16.27■□□□□ 0.2
COPS7B-201ENST00000350033 CHAMP1Q96JM3 812 aa16.27■□□□□ 0.2
COPS7B-201ENST00000350033 UPF3BQ9BZI7 483 aaKnown RBP16.27■□□□□ 0.2
COPS7B-201ENST00000350033 NAP1L2Q9ULW6 460 aaPredicted RBP16.27■□□□□ 0.2
COPS7B-201ENST00000350033 OFD1O75665 1012 aa16.27■□□□□ 0.2
COPS7B-201ENST00000350033 TOM1L2Q6ZVM7 507 aa16.27■□□□□ 0.2
COPS7B-201ENST00000350033 AOX1Q06278 1338 aa16.27■□□□□ 0.19
COPS7B-201ENST00000350033 DDX11L8A8MPP1 907 aa16.26■□□□□ 0.19
COPS7B-201ENST00000350033 NEURL1BA8MQ27 555 aa16.26■□□□□ 0.19
COPS7B-201ENST00000350033 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.26■□□□□ 0.198e-10■■■□□ 14.8
COPS7B-201ENST00000350033 ATP5J2-PTCD1G3V325 749 aa16.26■□□□□ 0.19
COPS7B-201ENST00000350033 PTCD1O75127 700 aaKnown RBP16.26■□□□□ 0.19
COPS7B-201ENST00000350033 CWC27Q6UX04 472 aaKnown RBP16.26■□□□□ 0.19
COPS7B-201ENST00000350033 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.26■□□□□ 0.19
COPS7B-201ENST00000350033 LRP10Q7Z4F1 713 aa16.26■□□□□ 0.19
COPS7B-201ENST00000350033 SASH1O94885 1247 aa16.25■□□□□ 0.19
COPS7B-201ENST00000350033 SNRPA1P09661 255 aaKnown RBP16.25■□□□□ 0.19
COPS7B-201ENST00000350033 FOXD4L5Q5VV16 416 aaPredicted RBP16.25■□□□□ 0.19
COPS7B-201ENST00000350033 AACSQ86V21 672 aa16.25■□□□□ 0.19
COPS7B-201ENST00000350033 FOXD4L4Q8WXT5 416 aaPredicted RBP16.25■□□□□ 0.19
COPS7B-201ENST00000350033 CCDC8Q9H0W5 538 aaPredicted RBP16.25■□□□□ 0.19
COPS7B-201ENST00000350033 TLR7Q9NYK1 1049 aaKnown RBP16.25■□□□□ 0.19
COPS7B-201ENST00000350033 CLASRPQ8N2M8 674 aaKnown RBP16.25■□□□□ 0.19
COPS7B-201ENST00000350033 GBP4Q96PP9 640 aa16.25■□□□□ 0.19
COPS7B-201ENST00000350033 STRN4Q9NRL3 753 aa16.25■□□□□ 0.19
COPS7B-201ENST00000350033 HSP90AB4PQ58FF6 505 aa16.24■□□□□ 0.19
COPS7B-201ENST00000350033 LARP1Q6PKG0 1096 aaKnown RBP16.24■□□□□ 0.19
COPS7B-201ENST00000350033 SLAIN2Q9P270 581 aa16.24■□□□□ 0.19
COPS7B-201ENST00000350033 LMTK3Q96Q04 1460 aa16.24■□□□□ 0.19
COPS7B-201ENST00000350033 DMTNQ08495 405 aa16.24■□□□□ 0.19
COPS7B-201ENST00000350033 GCKRQ14397 625 aa16.24■□□□□ 0.19
COPS7B-201ENST00000350033 ANKRD13DQ6ZTN6 518 aa16.24■□□□□ 0.19
COPS7B-201ENST00000350033 TMX3Q96JJ7 454 aa16.24■□□□□ 0.19
COPS7B-201ENST00000350033 FMNL2Q96PY5 1086 aa16.24■□□□□ 0.19
COPS7B-201ENST00000350033 ZHX1Q9UKY1 873 aaPredicted RBP16.24■□□□□ 0.19
COPS7B-201ENST00000350033 PKD1L3Q7Z443 1732 aa16.24■□□□□ 0.19
COPS7B-201ENST00000350033 CPDO75976 1380 aa16.24■□□□□ 0.19
COPS7B-201ENST00000350033 IFIT2P09913 472 aaKnown RBP16.23■□□□□ 0.19
COPS7B-201ENST00000350033 CNTROBQ8N137 903 aa16.23■□□□□ 0.19
COPS7B-201ENST00000350033 DDX54Q8TDD1 881 aaKnown RBP16.23■□□□□ 0.19
COPS7B-201ENST00000350033 EAF2Q96CJ1 260 aaPredicted RBP16.23■□□□□ 0.19
COPS7B-201ENST00000350033 METTL22Q9BUU2 404 aaPredicted RBP16.23■□□□□ 0.19
COPS7B-201ENST00000350033 UTYO14607 1347 aa16.23■□□□□ 0.19
COPS7B-201ENST00000350033 STRCQ7RTU9 1775 aa16.23■□□□□ 0.19
COPS7B-201ENST00000350033 BAG4O95429 457 aaKnown RBP16.23■□□□□ 0.19
COPS7B-201ENST00000350033 MCCP23508 829 aa16.23■□□□□ 0.19
COPS7B-201ENST00000350033 NEXNQ0ZGT2 675 aa16.23■□□□□ 0.19
COPS7B-201ENST00000350033 LARP6Q9BRS8 491 aaKnown RBP16.23■□□□□ 0.19
COPS7B-201ENST00000350033 SGSM2O43147 1006 aa16.22■□□□□ 0.19
COPS7B-201ENST00000350033 ZDHHC9Q9Y397 364 aa16.22■□□□□ 0.19
COPS7B-201ENST00000350033 G3BP1Q13283 466 aaKnown RBP eCLIP16.22■□□□□ 0.19
COPS7B-201ENST00000350033 FAM13BQ9NYF5 915 aa16.22■□□□□ 0.19
COPS7B-201ENST00000350033 MRC1P22897 1456 aa16.22■□□□□ 0.19
COPS7B-201ENST00000350033 WDR17Q8IZU2 1322 aa16.21■□□□□ 0.19
COPS7B-201ENST00000350033 UBE3BQ7Z3V4 1068 aa16.21■□□□□ 0.19
COPS7B-201ENST00000350033 ZCRB1Q8TBF4 217 aaKnown RBP16.21■□□□□ 0.19
COPS7B-201ENST00000350033 ECHDC1Q9NTX5 307 aa16.21■□□□□ 0.19
COPS7B-201ENST00000350033 KDM4FA0A1W2PPD8 638 aa16.21■□□□□ 0.19
COPS7B-201ENST00000350033 NBPF26B4DH59 902 aa16.21■□□□□ 0.19
COPS7B-201ENST00000350033 GLRX3O76003 335 aaKnown RBP16.21■□□□□ 0.19
COPS7B-201ENST00000350033 NBPF14Q5TI25 921 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms