RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 FMNL2Q96PY5 1086 aa16.9■□□□□ 0.3
TRIM4-201ENST00000349062 TLR7Q9NYK1 1049 aaKnown RBP16.9■□□□□ 0.3
TRIM4-201ENST00000349062 IGKV5-2P06315 115 aa16.9■□□□□ 0.3
TRIM4-201ENST00000349062 BABAM1Q9NWV8 329 aa16.9■□□□□ 0.3
TRIM4-201ENST00000349062 TAOK2Q9UL54 1235 aa16.9■□□□□ 0.3
TRIM4-201ENST00000349062 MEGF6O75095 1541 aa16.89■□□□□ 0.3
TRIM4-201ENST00000349062 TTLL7Q6ZT98 887 aa16.89■□□□□ 0.3
TRIM4-201ENST00000349062 MCCP23508 829 aa16.89■□□□□ 0.29
TRIM4-201ENST00000349062 MCTP1Q6DN14 999 aa16.89■□□□□ 0.29
TRIM4-201ENST00000349062 LINS1Q8NG48 757 aa16.89■□□□□ 0.29
TRIM4-201ENST00000349062 DCAF5Q96JK2 942 aa16.89■□□□□ 0.29
TRIM4-201ENST00000349062 NEUROD6Q96NK8 337 aa16.89■□□□□ 0.29
TRIM4-201ENST00000349062 VIRMAQ69YN4 1812 aaKnown RBP16.88■□□□□ 0.29
TRIM4-201ENST00000349062 BTG4Q9NY30 223 aa16.88■□□□□ 0.29
TRIM4-201ENST00000349062 PDIA6Q15084 440 aa16.88■□□□□ 0.29
TRIM4-201ENST00000349062 DNAJC2Q99543 621 aaKnown RBP16.88■□□□□ 0.29
TRIM4-201ENST00000349062 KDM4FA0A1W2PPD8 638 aa16.88■□□□□ 0.29
TRIM4-201ENST00000349062 RGPD5Q99666 1765 aa16.87■□□□□ 0.29
TRIM4-201ENST00000349062 PIP4K2BP78356 416 aa16.87■□□□□ 0.29
TRIM4-201ENST00000349062 GLIPR1L2Q4G1C9 344 aa16.87■□□□□ 0.29
TRIM4-201ENST00000349062 CHMP4AQ9BY43 222 aa16.87■□□□□ 0.29
TRIM4-201ENST00000349062 CNTROBQ8N137 903 aa16.86■□□□□ 0.29
TRIM4-201ENST00000349062 TRIM44Q96DX7 344 aaPredicted RBP16.86■□□□□ 0.29
TRIM4-201ENST00000349062 TCEANC2Q96MN5 208 aa16.86■□□□□ 0.29
TRIM4-201ENST00000349062 MARF1Q9Y4F3 1742 aaKnown RBP16.86■□□□□ 0.29
TRIM4-201ENST00000349062 AK9Q5TCS8 1911 aa16.86■□□□□ 0.29
TRIM4-201ENST00000349062 HSP90AA2PQ14568 343 aaPredicted RBP16.86■□□□□ 0.29
TRIM4-201ENST00000349062 SNX21Q969T3 373 aa16.86■□□□□ 0.29
TRIM4-201ENST00000349062 CHGBP05060 677 aa16.86■□□□□ 0.29
TRIM4-201ENST00000349062 HOXB7P09629 217 aa16.86■□□□□ 0.29
TRIM4-201ENST00000349062 NEURL1BA8MQ27 555 aa16.85■□□□□ 0.29
TRIM4-201ENST00000349062 GPTP24298 496 aa16.85■□□□□ 0.29
TRIM4-201ENST00000349062 EAF2Q96CJ1 260 aaPredicted RBP16.85■□□□□ 0.29
TRIM4-201ENST00000349062 KDM6AO15550 1401 aaPredicted RBP16.85■□□□□ 0.29
TRIM4-201ENST00000349062 RAB11FIP3O75154 756 aa16.85■□□□□ 0.29
TRIM4-201ENST00000349062 GCKRQ14397 625 aa16.85■□□□□ 0.29
TRIM4-201ENST00000349062 KAZALD1Q96I82 304 aa16.85■□□□□ 0.29
TRIM4-201ENST00000349062 ZNF594Q96JF6 807 aaPredicted RBP16.85■□□□□ 0.29
TRIM4-201ENST00000349062 GBP4Q96PP9 640 aa16.85■□□□□ 0.29
TRIM4-201ENST00000349062 FSD1Q9BTV5 496 aa16.85■□□□□ 0.29
TRIM4-201ENST00000349062 LMBR1LQ6UX01 489 aa16.84■□□□□ 0.29
TRIM4-201ENST00000349062 IL2RBP14784 551 aa16.84■□□□□ 0.29
TRIM4-201ENST00000349062 POLA2Q14181 598 aa16.83■□□□□ 0.29
TRIM4-201ENST00000349062 HSP90AB4PQ58FF6 505 aa16.83■□□□□ 0.29
TRIM4-201ENST00000349062 GPATCH3Q96I76 525 aa16.83■□□□□ 0.28
TRIM4-201ENST00000349062 FAM227BQ96M60 508 aa16.83■□□□□ 0.28
TRIM4-201ENST00000349062 ASAP1Q9ULH1 1129 aa16.83■□□□□ 0.28
TRIM4-201ENST00000349062 TNS3Q68CZ2 1445 aa16.83■□□□□ 0.28
TRIM4-201ENST00000349062 ALDH1L1O75891 902 aa16.83■□□□□ 0.28
TRIM4-201ENST00000349062 SASH1O94885 1247 aa16.83■□□□□ 0.28
TRIM4-201ENST00000349062 PRPF40BQ6NWY9 871 aaKnown RBP16.83■□□□□ 0.28
TRIM4-201ENST00000349062 PI4K2BQ8TCG2 481 aa16.83■□□□□ 0.28
TRIM4-201ENST00000349062 ECHDC1Q9NTX5 307 aa16.83■□□□□ 0.28
TRIM4-201ENST00000349062 DDX49Q9Y6V7 483 aaKnown RBP16.83■□□□□ 0.28
TRIM4-201ENST00000349062 TMX3Q96JJ7 454 aa16.82■□□□□ 0.28
TRIM4-201ENST00000349062 TMOD3Q9NYL9 352 aa16.82■□□□□ 0.28
TRIM4-201ENST00000349062 SLFNL1Q499Z3 407 aa16.81■□□□□ 0.28
TRIM4-201ENST00000349062 METTL22Q9BUU2 404 aaPredicted RBP16.81■□□□□ 0.28
TRIM4-201ENST00000349062 OSBPL3Q9H4L5 887 aa16.81■□□□□ 0.28
TRIM4-201ENST00000349062 MED1Q15648 1581 aaPredicted RBP16.81■□□□□ 0.28
TRIM4-201ENST00000349062 NBPF26B4DH59 902 aa16.81■□□□□ 0.28
TRIM4-201ENST00000349062 TFCP2Q12800 502 aa16.81■□□□□ 0.28
TRIM4-201ENST00000349062 NBPF14Q5TI25 921 aa16.81■□□□□ 0.28
TRIM4-201ENST00000349062 NBPF10Q6P3W6 841 aaKnown RBP16.81■□□□□ 0.28
TRIM4-201ENST00000349062 NBPF15Q8N660 670 aa16.81■□□□□ 0.28
TRIM4-201ENST00000349062 ACSBG1Q96GR2 724 aa16.81■□□□□ 0.28
TRIM4-201ENST00000349062 GDPD2Q9HCC8 539 aa16.81■□□□□ 0.28
TRIM4-201ENST00000349062 GLRX3O76003 335 aaKnown RBP16.8■□□□□ 0.28
TRIM4-201ENST00000349062 GOLGA6L22H0YM25 854 aa16.8■□□□□ 0.28
TRIM4-201ENST00000349062 RASEFQ8IZ41 740 aa16.8■□□□□ 0.28
TRIM4-201ENST00000349062 PPFIA3O75145 1194 aa16.8■□□□□ 0.28
TRIM4-201ENST00000349062 PRPF40AO75400 957 aaKnown RBP16.8■□□□□ 0.28
TRIM4-201ENST00000349062 PTH1RQ03431 593 aa16.8■□□□□ 0.28
TRIM4-201ENST00000349062 SYNE4Q8N205 404 aa16.8■□□□□ 0.28
TRIM4-201ENST00000349062 WDR17Q8IZU2 1322 aa16.79■□□□□ 0.28
TRIM4-201ENST00000349062 TIMM10P62072 90 aa16.79■□□□□ 0.28
TRIM4-201ENST00000349062 DDX46Q7L014 1031 aaKnown RBP16.79■□□□□ 0.28
TRIM4-201ENST00000349062 DNAJC10Q8IXB1 793 aa16.79■□□□□ 0.28
TRIM4-201ENST00000349062 NAP1L2Q9ULW6 460 aaPredicted RBP16.79■□□□□ 0.28
TRIM4-201ENST00000349062 CASTP20810 708 aaKnown RBP16.79■□□□□ 0.28
TRIM4-201ENST00000349062 ARID3AQ99856 593 aa16.79■□□□□ 0.28
TRIM4-201ENST00000349062 SALL3Q9BXA9 1300 aa16.79■□□□□ 0.28
TRIM4-201ENST00000349062 PKNOX2Q96KN3 472 aa16.78■□□□□ 0.28
TRIM4-201ENST00000349062 FAM89AQ96GI7 184 aa16.78■□□□□ 0.28
TRIM4-201ENST00000349062 JAKMIP1Q96N16 626 aaKnown RBP16.78■□□□□ 0.28
TRIM4-201ENST00000349062 SNRKQ9NRH2 765 aa16.78■□□□□ 0.28
TRIM4-201ENST00000349062 ZNF142P52746 1687 aaPredicted RBP16.78■□□□□ 0.28
TRIM4-201ENST00000349062 DDX11L8A8MPP1 907 aa16.78■□□□□ 0.28
TRIM4-201ENST00000349062 RAB3GAP1Q15042 981 aa16.78■□□□□ 0.28
TRIM4-201ENST00000349062 TAF7LQ5H9L4 462 aa16.78■□□□□ 0.28
TRIM4-201ENST00000349062 STAP2Q9UGK3 403 aa16.78■□□□□ 0.28
TRIM4-201ENST00000349062 DBNDD2Q9BQY9 259 aa16.77■□□□□ 0.28
TRIM4-201ENST00000349062 NMIQ13287 307 aaPredicted RBP16.77■□□□□ 0.28
TRIM4-201ENST00000349062 CCDC129Q6ZRS4 1044 aa16.77■□□□□ 0.28
TRIM4-201ENST00000349062 PCDH11XQ9BZA7 1347 aa16.77■□□□□ 0.28
TRIM4-201ENST00000349062 PCDH11YQ9BZA8 1340 aa16.77■□□□□ 0.28
TRIM4-201ENST00000349062 BAG4O95429 457 aaKnown RBP16.76■□□□□ 0.27
TRIM4-201ENST00000349062 STK3Q13188 491 aa16.76■□□□□ 0.27
TRIM4-201ENST00000349062 GRPEL1Q9HAV7 217 aa16.76■□□□□ 0.27
TRIM4-201ENST00000349062 TBC1D2BQ9UPU7 963 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms