RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 SCN11AQ9UI33 1791 aa17.59■□□□□ 0.41
ARHGEF1-202ENST00000347545 GADD45BO75293 160 aaPredicted RBP17.58■□□□□ 0.41
ARHGEF1-202ENST00000347545 LARP6Q9BRS8 491 aaKnown RBP17.58■□□□□ 0.41
ARHGEF1-202ENST00000347545 GDPD2Q9HCC8 539 aa17.58■□□□□ 0.41
ARHGEF1-202ENST00000347545 TTC41PQ6P2S7 1318 aa17.58■□□□□ 0.41
ARHGEF1-202ENST00000347545 CPA1P15085 419 aa17.58■□□□□ 0.4
ARHGEF1-202ENST00000347545 ANKRD24Q8TF21 1146 aa17.58■□□□□ 0.4
ARHGEF1-202ENST00000347545 AK2P54819 239 aa17.58■□□□□ 0.4
ARHGEF1-202ENST00000347545 FOXD4L6Q3SYB3 417 aaPredicted RBP17.58■□□□□ 0.4
ARHGEF1-202ENST00000347545 AMOTQ4VCS5 1084 aa17.58■□□□□ 0.4
ARHGEF1-202ENST00000347545 FOXD4L3Q6VB84 417 aaPredicted RBP17.58■□□□□ 0.4
ARHGEF1-202ENST00000347545 MBD3O95983 291 aa17.57■□□□□ 0.4
ARHGEF1-202ENST00000347545 PTH1RQ03431 593 aa17.57■□□□□ 0.4
ARHGEF1-202ENST00000347545 KSR2Q6VAB6 950 aa17.57■□□□□ 0.4
ARHGEF1-202ENST00000347545 ZSCAN30Q86W11 494 aa17.57■□□□□ 0.4
ARHGEF1-202ENST00000347545 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.57■□□□□ 0.4
ARHGEF1-202ENST00000347545 LMTK3Q96Q04 1460 aa17.57■□□□□ 0.4
ARHGEF1-202ENST00000347545 ALDH1L1O75891 902 aa17.56■□□□□ 0.4
ARHGEF1-202ENST00000347545 LARGE1O95461 756 aa17.56■□□□□ 0.4
ARHGEF1-202ENST00000347545 HSP90AB4PQ58FF6 505 aa17.56■□□□□ 0.4
ARHGEF1-202ENST00000347545 GLRX3O76003 335 aaKnown RBP17.56■□□□□ 0.4
ARHGEF1-202ENST00000347545 PDIA6Q15084 440 aa17.56■□□□□ 0.4
ARHGEF1-202ENST00000347545 C1orf141Q5JVX7 400 aa17.56■□□□□ 0.4
ARHGEF1-202ENST00000347545 ALS2Q96Q42 1657 aa17.55■□□□□ 0.4
ARHGEF1-202ENST00000347545 SUCLG2Q96I99 432 aa17.55■□□□□ 0.4
ARHGEF1-202ENST00000347545 OS9Q13438 667 aaPredicted RBP17.55■□□□□ 0.4
ARHGEF1-202ENST00000347545 USP48Q86UV5 1035 aa17.55■□□□□ 0.4
ARHGEF1-202ENST00000347545 UTYO14607 1347 aa17.54■□□□□ 0.4
ARHGEF1-202ENST00000347545 WDR33Q9C0J8 1336 aaKnown RBP17.54■□□□□ 0.4
ARHGEF1-202ENST00000347545 ADCK5Q3MIX3 580 aa17.54■□□□□ 0.4
ARHGEF1-202ENST00000347545 ANP32BQ92688 251 aaKnown RBP17.54■□□□□ 0.4
ARHGEF1-202ENST00000347545 C9orf78Q9NZ63 289 aaPredicted RBP17.54■□□□□ 0.4
ARHGEF1-202ENST00000347545 ECHDC1Q9NTX5 307 aa17.54■□□□□ 0.4
ARHGEF1-202ENST00000347545 DTNBO60941 627 aa17.53■□□□□ 0.4
ARHGEF1-202ENST00000347545 SASH1O94885 1247 aa17.53■□□□□ 0.4
ARHGEF1-202ENST00000347545 CHMP4AQ9BY43 222 aa17.53■□□□□ 0.4
ARHGEF1-202ENST00000347545 CLASRPQ8N2M8 674 aaKnown RBP17.53■□□□□ 0.4
ARHGEF1-202ENST00000347545 KCNB2Q92953 911 aa17.53■□□□□ 0.4
ARHGEF1-202ENST00000347545 HYPKQ9NX55 129 aa17.53■□□□□ 0.4
ARHGEF1-202ENST00000347545 ST3GAL1Q11201 340 aa17.53■□□□□ 0.4
ARHGEF1-202ENST00000347545 COL9A3Q14050 684 aaPredicted RBP17.53■□□□□ 0.4
ARHGEF1-202ENST00000347545 ADAMTSL3P82987 1691 aa17.52■□□□□ 0.4
ARHGEF1-202ENST00000347545 CASTP20810 708 aaKnown RBP17.52■□□□□ 0.4
ARHGEF1-202ENST00000347545 BICC1Q9H694 974 aaKnown RBP17.52■□□□□ 0.4
ARHGEF1-202ENST00000347545 LIMCH1Q9UPQ0 1083 aa17.52■□□□□ 0.4
ARHGEF1-202ENST00000347545 KDM6AO15550 1401 aaPredicted RBP17.52■□□□□ 0.4
ARHGEF1-202ENST00000347545 MRC1P22897 1456 aa17.52■□□□□ 0.4
ARHGEF1-202ENST00000347545 TMEM87AQ8NBN3 555 aa17.52■□□□□ 0.39
ARHGEF1-202ENST00000347545 DIAPH3Q9NSV4 1193 aa17.52■□□□□ 0.39
ARHGEF1-202ENST00000347545 NPHP4O75161 1426 aaPredicted RBP17.51■□□□□ 0.39
ARHGEF1-202ENST00000347545 IGKV5-2P06315 115 aa17.51■□□□□ 0.39
ARHGEF1-202ENST00000347545 TLR7Q9NYK1 1049 aaKnown RBP17.51■□□□□ 0.39
ARHGEF1-202ENST00000347545 CNPY2Q9Y2B0 182 aa17.51■□□□□ 0.39
ARHGEF1-202ENST00000347545 KIF1AQ12756 1690 aa17.51■□□□□ 0.39
ARHGEF1-202ENST00000347545 GRM8O00222 908 aa17.51■□□□□ 0.39
ARHGEF1-202ENST00000347545 HS1BP3Q53T59 392 aa17.51■□□□□ 0.39
ARHGEF1-202ENST00000347545 AACSQ86V21 672 aa17.51■□□□□ 0.39
ARHGEF1-202ENST00000347545 RNF214Q8ND24 703 aa17.51■□□□□ 0.39
ARHGEF1-202ENST00000347545 LINS1Q8NG48 757 aa17.51■□□□□ 0.39
ARHGEF1-202ENST00000347545 EAF2Q96CJ1 260 aaPredicted RBP17.51■□□□□ 0.39
ARHGEF1-202ENST00000347545 AFDNP55196 1824 aaKnown RBP17.51■□□□□ 0.39
ARHGEF1-202ENST00000347545 ZSCAN22P10073 491 aaPredicted RBP17.51■□□□□ 0.39
ARHGEF1-202ENST00000347545 SYT1P21579 422 aa17.51■□□□□ 0.39
ARHGEF1-202ENST00000347545 PRPF40BQ6NWY9 871 aaKnown RBP17.51■□□□□ 0.39
ARHGEF1-202ENST00000347545 KIAA1211Q6ZU35 1233 aa17.51■□□□□ 0.39
ARHGEF1-202ENST00000347545 COL18A1P39060 1754 aa17.5■□□□□ 0.39
ARHGEF1-202ENST00000347545 DDX21Q9NR30 783 aaKnown RBP eCLIP17.5■□□□□ 0.39
ARHGEF1-202ENST00000347545 FAM227BQ96M60 508 aa17.5■□□□□ 0.39
ARHGEF1-202ENST00000347545 NOL7Q9UMY1 257 aaKnown RBP17.5■□□□□ 0.39
ARHGEF1-202ENST00000347545 IFIT2P09913 472 aaKnown RBP17.49■□□□□ 0.39
ARHGEF1-202ENST00000347545 AIMP1Q12904 312 aaKnown RBP17.49■□□□□ 0.39
ARHGEF1-202ENST00000347545 NECTIN1Q15223 517 aa17.49■□□□□ 0.39
ARHGEF1-202ENST00000347545 LMOD2Q6P5Q4 547 aa17.49■□□□□ 0.39
ARHGEF1-202ENST00000347545 ERC1Q8IUD2 1116 aa17.49■□□□□ 0.39
ARHGEF1-202ENST00000347545 SLC39A6Q13433 755 aa17.49■□□□□ 0.39
ARHGEF1-202ENST00000347545 ZSWIM6Q9HCJ5 1215 aa17.49■□□□□ 0.39
ARHGEF1-202ENST00000347545 ERBB3P21860 1342 aa17.49■□□□□ 0.39
ARHGEF1-202ENST00000347545 STX6O43752 255 aa17.49■□□□□ 0.39
ARHGEF1-202ENST00000347545 DDX54Q8TDD1 881 aaKnown RBP17.49■□□□□ 0.39
ARHGEF1-202ENST00000347545 JAKMIP1Q96N16 626 aaKnown RBP17.49■□□□□ 0.39
ARHGEF1-202ENST00000347545 TSPY26PQ9H489 355 aa17.49■□□□□ 0.39
ARHGEF1-202ENST00000347545 CCDC171Q6TFL3 1326 aa17.48■□□□□ 0.39
ARHGEF1-202ENST00000347545 MST1RQ04912 1400 aa17.48■□□□□ 0.39
ARHGEF1-202ENST00000347545 EVI5LQ96CN4 794 aa17.48■□□□□ 0.39
ARHGEF1-202ENST00000347545 GLI3P10071 1580 aa17.48■□□□□ 0.39
ARHGEF1-202ENST00000347545 ARFGEF2Q9Y6D5 1785 aa17.48■□□□□ 0.39
ARHGEF1-202ENST00000347545 KLHDC4Q8TBB5 520 aa17.48■□□□□ 0.39
ARHGEF1-202ENST00000347545 CCDC8Q9H0W5 538 aaPredicted RBP17.48■□□□□ 0.39
ARHGEF1-202ENST00000347545 NMIQ13287 307 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF1-202ENST00000347545 EPHA10Q5JZY3 1008 aa17.47■□□□□ 0.39
ARHGEF1-202ENST00000347545 VPS53Q5VIR6 699 aa17.47■□□□□ 0.39
ARHGEF1-202ENST00000347545 CCDC83Q8IWF9 413 aa17.47■□□□□ 0.39
ARHGEF1-202ENST00000347545 RUFY2Q8WXA3 655 aa17.47■□□□□ 0.39
ARHGEF1-202ENST00000347545 F13A1P00488 732 aa17.47■□□□□ 0.39
ARHGEF1-202ENST00000347545 KRT28Q7Z3Y7 464 aa17.47■□□□□ 0.39
ARHGEF1-202ENST00000347545 TM6SF1Q9BZW5 370 aa17.47■□□□□ 0.39
ARHGEF1-202ENST00000347545 SNRKQ9NRH2 765 aa17.47■□□□□ 0.39
ARHGEF1-202ENST00000347545 PDRG1Q9NUG6 133 aa17.47■□□□□ 0.39
ARHGEF1-202ENST00000347545 MEGF6O75095 1541 aa17.47■□□□□ 0.39
ARHGEF1-202ENST00000347545 C1orf167Q5SNV9 1468 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms