RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 MBIPQ9NS73 344 aa21.05■□□□□ 0.96
RAB5C-201ENST00000346213 CHD4Q14839 1912 aa21.03■□□□□ 0.96
RAB5C-201ENST00000346213 EIF2S2P20042 333 aaKnown RBP21.03■□□□□ 0.96
RAB5C-201ENST00000346213 ZNF784Q8NCA9 323 aaPredicted RBP21.03■□□□□ 0.96
RAB5C-201ENST00000346213 BABAM1Q9NWV8 329 aa21.03■□□□□ 0.96
RAB5C-201ENST00000346213 BCS1LQ9Y276 419 aa21.03■□□□□ 0.96
RAB5C-201ENST00000346213 DLEC1Q9Y238 1755 aa21.02■□□□□ 0.96
RAB5C-201ENST00000346213 ADCY9O60503 1353 aa21.01■□□□□ 0.95
RAB5C-201ENST00000346213 CFAP44Q96MT7 982 aa21.01■□□□□ 0.95
RAB5C-201ENST00000346213 UBN2Q6ZU65 1347 aa21.01■□□□□ 0.95
RAB5C-201ENST00000346213 TNRC6CQ9HCJ0 1690 aaKnown RBP21■□□□□ 0.95
RAB5C-201ENST00000346213 GRIN3BO60391 1043 aa21■□□□□ 0.95
RAB5C-201ENST00000346213 ZBTB3Q9H5J0 574 aa21■□□□□ 0.95
RAB5C-201ENST00000346213 MAP3K15Q6ZN16 1313 aa20.99■□□□□ 0.95
RAB5C-201ENST00000346213 ABCC12Q96J65 1359 aa20.98■□□□□ 0.95
RAB5C-201ENST00000346213 PRELPP51888 382 aa20.98■□□□□ 0.95
RAB5C-201ENST00000346213 CLEC4GQ6UXB4 293 aa20.98■□□□□ 0.95
RAB5C-201ENST00000346213 SETDB2Q96T68 719 aa20.98■□□□□ 0.95
RAB5C-201ENST00000346213 FAM177BA6PVY3 158 aa20.97■□□□□ 0.95
RAB5C-201ENST00000346213 CHPF2Q9P2E5 772 aa20.97■□□□□ 0.95
RAB5C-201ENST00000346213 NIP7Q9Y221 180 aaKnown RBP eCLIP20.97■□□□□ 0.95
RAB5C-201ENST00000346213 ARFGEF1Q9Y6D6 1849 aa20.97■□□□□ 0.95
RAB5C-201ENST00000346213 NUP98P52948 1817 aa20.96■□□□□ 0.95
RAB5C-201ENST00000346213 ERBB4Q15303 1308 aa20.96■□□□□ 0.95
RAB5C-201ENST00000346213 SLC51AQ86UW1 340 aa20.96■□□□□ 0.95
RAB5C-201ENST00000346213 C2CD5Q86YS7 1000 aa20.96■□□□□ 0.95
RAB5C-201ENST00000346213 C8orf58Q8NAV2 365 aa20.96■□□□□ 0.95
RAB5C-201ENST00000346213 TSR2Q969E8 191 aaKnown RBP20.96■□□□□ 0.95
RAB5C-201ENST00000346213 IFT57Q9NWB7 429 aa20.96■□□□□ 0.95
RAB5C-201ENST00000346213 ATP10DQ9P241 1426 aa20.96■□□□□ 0.95
RAB5C-201ENST00000346213 WWC1Q8IX03 1113 aa20.96■□□□□ 0.95
RAB5C-201ENST00000346213 TSPYL6Q8N831 410 aa20.96■□□□□ 0.95
RAB5C-201ENST00000346213 CNBD1Q8NA66 436 aa20.96■□□□□ 0.95
RAB5C-201ENST00000346213 PIM2Q9P1W9 311 aa20.96■□□□□ 0.95
RAB5C-201ENST00000346213 GPTP24298 496 aa20.95■□□□□ 0.94
RAB5C-201ENST00000346213 DUSP27Q5VZP5 1158 aa20.95■□□□□ 0.94
RAB5C-201ENST00000346213 ELL2O00472 640 aaPredicted RBP20.94■□□□□ 0.94
RAB5C-201ENST00000346213 XAGE3Q8WTP9 111 aa20.94■□□□□ 0.94
RAB5C-201ENST00000346213 BRIP1Q9BX63 1249 aa20.94■□□□□ 0.94
RAB5C-201ENST00000346213 ERVV-1B6SEH8 477 aa20.93■□□□□ 0.94
RAB5C-201ENST00000346213 DALRD3Q5D0E6 543 aaKnown RBP20.93■□□□□ 0.94
RAB5C-201ENST00000346213 ZNF428Q96B54 188 aa20.93■□□□□ 0.94
RAB5C-201ENST00000346213 SPINK5Q9NQ38 1064 aaPredicted RBP20.93■□□□□ 0.94
RAB5C-201ENST00000346213 SALL2Q9Y467 1007 aaPredicted RBP20.93■□□□□ 0.94
RAB5C-201ENST00000346213 HDGFL1Q5TGJ6 251 aa20.93■□□□□ 0.94
RAB5C-201ENST00000346213 COPS6Q7L5N1 327 aa20.93■□□□□ 0.94
RAB5C-201ENST00000346213 NPM2Q86SE8 214 aaKnown RBP20.93■□□□□ 0.94
RAB5C-201ENST00000346213 NBPF5PQ86XG9 351 aaPredicted RBP20.93■□□□□ 0.94
RAB5C-201ENST00000346213 NUTM1Q86Y26 1132 aa20.93■□□□□ 0.94
RAB5C-201ENST00000346213 ZNF34Q8IZ26 560 aa20.93■□□□□ 0.94
RAB5C-201ENST00000346213 RGL2O15211 777 aa20.92■□□□□ 0.94
RAB5C-201ENST00000346213 RASSF7Q02833 373 aa20.92■□□□□ 0.94
RAB5C-201ENST00000346213 CCDC27Q2M243 656 aa20.92■□□□□ 0.94
RAB5C-201ENST00000346213 SUSD4Q5VX71 490 aa20.92■□□□□ 0.94
RAB5C-201ENST00000346213 C3orf67Q6ZVT6 689 aa20.92■□□□□ 0.94
RAB5C-201ENST00000346213 FAM9BQ8IZU0 186 aa20.92■□□□□ 0.94
RAB5C-201ENST00000346213 DDX21Q9NR30 783 aaKnown RBP eCLIP20.92■□□□□ 0.94
RAB5C-201ENST00000346213 AIMP1Q12904 312 aaKnown RBP20.91■□□□□ 0.94
RAB5C-201ENST00000346213 GIGYF2Q6Y7W6 1299 aaKnown RBP20.91■□□□□ 0.94
RAB5C-201ENST00000346213 ARHGAP27Q6ZUM4 889 aa20.91■□□□□ 0.94
RAB5C-201ENST00000346213 ZNF652Q9Y2D9 606 aa20.91■□□□□ 0.94
RAB5C-201ENST00000346213 NTSR2O95665 410 aa20.9■□□□□ 0.94
RAB5C-201ENST00000346213 KIF6Q6ZMV9 814 aa20.9■□□□□ 0.94
RAB5C-201ENST00000346213 SRGNP10124 158 aa20.89■□□□□ 0.94
RAB5C-201ENST00000346213 GNAI1P63096 354 aa20.89■□□□□ 0.94
RAB5C-201ENST00000346213 ERFEQ4G0M1 354 aa20.89■□□□□ 0.94
RAB5C-201ENST00000346213 SLX4Q8IY92 1834 aa20.89■□□□□ 0.93
RAB5C-201ENST00000346213 KLRG2A4D1S0 409 aaPredicted RBP20.89■□□□□ 0.93
RAB5C-201ENST00000346213 HOXB7P09629 217 aa20.89■□□□□ 0.93
RAB5C-201ENST00000346213 SYNE4Q8N205 404 aa20.89■□□□□ 0.93
RAB5C-201ENST00000346213 H0YIN7 160 aa20.88■□□□□ 0.93
RAB5C-201ENST00000346213 NFKBIEO00221 500 aa20.88■□□□□ 0.93
RAB5C-201ENST00000346213 OLFM4Q6UX06 510 aa20.88■□□□□ 0.93
RAB5C-201ENST00000346213 PHAXQ9H814 394 aaKnown RBP20.88■□□□□ 0.93
RAB5C-201ENST00000346213 ZNF622Q969S3 477 aaKnown RBP eCLIP20.87■□□□□ 0.93
RAB5C-201ENST00000346213 ZNF219Q9P2Y4 722 aaPredicted RBP20.87■□□□□ 0.93
RAB5C-201ENST00000346213 ANKRD36CQ5JPF3 1778 aa20.86■□□□□ 0.93
RAB5C-201ENST00000346213 PDE6BP35913 854 aa20.86■□□□□ 0.93
RAB5C-201ENST00000346213 ST5P78524 1137 aa20.86■□□□□ 0.93
RAB5C-201ENST00000346213 TTLL6Q8N841 843 aa20.86■□□□□ 0.93
RAB5C-201ENST00000346213 CACNA1SQ13698 1873 aa20.86■□□□□ 0.93
RAB5C-201ENST00000346213 TCERG1O14776 1098 aaKnown RBP20.86■□□□□ 0.93
RAB5C-201ENST00000346213 FANCIQ9NVI1 1328 aa20.85■□□□□ 0.93
RAB5C-201ENST00000346213 ZNF526Q8TF50 670 aaPredicted RBP20.85■□□□□ 0.93
RAB5C-201ENST00000346213 COL4A1P02462 1669 aa20.85■□□□□ 0.93
RAB5C-201ENST00000346213 IBTKQ9P2D0 1353 aaPredicted RBP20.84■□□□□ 0.93
RAB5C-201ENST00000346213 ARFGEF2Q9Y6D5 1785 aa20.84■□□□□ 0.93
RAB5C-201ENST00000346213 C21orf2O43822 256 aa20.84■□□□□ 0.93
RAB5C-201ENST00000346213 C9orf131Q5VYM1 1079 aa20.84■□□□□ 0.93
RAB5C-201ENST00000346213 PRPF40BQ6NWY9 871 aaKnown RBP20.84■□□□□ 0.93
RAB5C-201ENST00000346213 C7orf43Q8WVR3 580 aa20.84■□□□□ 0.93
RAB5C-201ENST00000346213 SNED1Q8TER0 1413 aa20.84■□□□□ 0.93
RAB5C-201ENST00000346213 TPTE2Q6XPS3 522 aa20.83■□□□□ 0.93
RAB5C-201ENST00000346213 DBF4Q9UBU7 674 aaPredicted RBP20.83■□□□□ 0.93
RAB5C-201ENST00000346213 ZNF521Q96K83 1311 aa20.83■□□□□ 0.93
RAB5C-201ENST00000346213 CALD1Q05682 793 aaKnown RBP20.83■□□□□ 0.92
RAB5C-201ENST00000346213 CRY2Q49AN0 593 aa20.83■□□□□ 0.92
RAB5C-201ENST00000346213 NLRP10Q86W26 655 aa20.83■□□□□ 0.92
RAB5C-201ENST00000346213 SBF1O95248 1867 aa20.82■□□□□ 0.92
RAB5C-201ENST00000346213 RIC1Q4ADV7 1423 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms