RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 EIF2S2P20042 333 aaKnown RBP15.66■□□□□ 0.1
TRIO-202ENST00000344204 RRP15Q9Y3B9 282 aaKnown RBP15.66■□□□□ 0.1
TRIO-202ENST00000344204 RNF216Q9NWF9 866 aaPredicted RBP15.66■□□□□ 0.1
TRIO-202ENST00000344204 HMOX1P09601 288 aa15.66■□□□□ 0.1
TRIO-202ENST00000344204 WHAMMP3Q1A5X7 153 aa15.66■□□□□ 0.1
TRIO-202ENST00000344204 CCDC129Q6ZRS4 1044 aa15.66■□□□□ 0.1
TRIO-202ENST00000344204 HDGFP51858 240 aaKnown RBP15.66■□□□□ 0.1
TRIO-202ENST00000344204 SYT10Q6XYQ8 523 aa15.66■□□□□ 0.1
TRIO-202ENST00000344204 ELP1O95163 1332 aa15.65■□□□□ 0.1
TRIO-202ENST00000344204 ZFYP08048 801 aaPredicted RBP15.65■□□□□ 0.1
TRIO-202ENST00000344204 ZNF853P0CG23 659 aa15.65■□□□□ 0.1
TRIO-202ENST00000344204 GJB2P29033 226 aa15.65■□□□□ 0.1
TRIO-202ENST00000344204 MYH9P35579 1960 aaKnown RBP15.65■□□□□ 0.1
TRIO-202ENST00000344204 ANKRD50Q9ULJ7 1429 aa15.65■□□□□ 0.1
TRIO-202ENST00000344204 UBASH3AP57075 661 aa15.65■□□□□ 0.1
TRIO-202ENST00000344204 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.65■□□□□ 0.11e-7■■■□□ 17.2
TRIO-202ENST00000344204 ATP11AP98196 1134 aa15.65■□□□□ 0.1
TRIO-202ENST00000344204 KLHL10Q6JEL2 608 aa15.65■□□□□ 0.1
TRIO-202ENST00000344204 RAD50Q92878 1312 aa15.65■□□□□ 0.1
TRIO-202ENST00000344204 SRGAP3O43295 1099 aa15.65■□□□□ 0.1
TRIO-202ENST00000344204 CHMP4BP1P59074 171 aa15.65■□□□□ 0.1
TRIO-202ENST00000344204 CCDC160A6NGH7 325 aa15.65■□□□□ 0.1
TRIO-202ENST00000344204 SYCP1Q15431 976 aa15.65■□□□□ 0.1
TRIO-202ENST00000344204 WASHC4Q2M389 1173 aa15.65■□□□□ 0.1
TRIO-202ENST00000344204 BIN1O00499 593 aa15.65■□□□□ 0.1
TRIO-202ENST00000344204 SSBP05455 408 aaKnown RBP eCLIP15.64■□□□□ 0.09
TRIO-202ENST00000344204 NDUFAB1O14561 156 aa15.64■□□□□ 0.09
TRIO-202ENST00000344204 IFT74Q96LB3 600 aa15.64■□□□□ 0.09
TRIO-202ENST00000344204 GAS2L2Q8NHY3 880 aa15.64■□□□□ 0.09
TRIO-202ENST00000344204 TMX3Q96JJ7 454 aa15.64■□□□□ 0.09
TRIO-202ENST00000344204 VEZTQ9HBM0 779 aa15.64■□□□□ 0.09
TRIO-202ENST00000344204 GBP1P32455 592 aa15.64■□□□□ 0.09
TRIO-202ENST00000344204 PCK1P35558 622 aa15.64■□□□□ 0.09
TRIO-202ENST00000344204 TSNAXIP1Q2TAA8 658 aa15.64■□□□□ 0.09
TRIO-202ENST00000344204 CEP131Q9UPN4 1083 aa15.64■□□□□ 0.09
TRIO-202ENST00000344204 KIF3CO14782 793 aa15.64■□□□□ 0.09
TRIO-202ENST00000344204 RHOXF2BP0C7M4 288 aa15.64■□□□□ 0.09
TRIO-202ENST00000344204 TTC22Q5TAA0 569 aa15.64■□□□□ 0.09
TRIO-202ENST00000344204 SSH1Q8WYL5 1049 aa15.64■□□□□ 0.09
TRIO-202ENST00000344204 RHOXF2Q9BQY4 288 aa15.64■□□□□ 0.09
TRIO-202ENST00000344204 ZBTB12Q9Y330 459 aaPredicted RBP15.64■□□□□ 0.09
TRIO-202ENST00000344204 ABCC11Q96J66 1382 aa15.63■□□□□ 0.09
TRIO-202ENST00000344204 STMN4Q9H169 189 aaPredicted RBP15.63■□□□□ 0.09
TRIO-202ENST00000344204 UBE4AQ14139 1066 aa15.63■□□□□ 0.09
TRIO-202ENST00000344204 TCEAL9Q9UHQ7 104 aa15.63■□□□□ 0.09
TRIO-202ENST00000344204 CPLX4Q7Z7G2 160 aa15.63■□□□□ 0.09
TRIO-202ENST00000344204 GOLGA6CA6NDK9 693 aa15.63■□□□□ 0.09
TRIO-202ENST00000344204 GOLGA6DP0CG33 693 aa15.63■□□□□ 0.09
TRIO-202ENST00000344204 GOLGA6AQ9NYA3 693 aa15.63■□□□□ 0.09
TRIO-202ENST00000344204 TAOK3Q9H2K8 898 aa15.63■□□□□ 0.09
TRIO-202ENST00000344204 DNAJC25Q9H1X3 360 aa15.63■□□□□ 0.09
TRIO-202ENST00000344204 SEC24BO95487 1268 aa15.62■□□□□ 0.09
TRIO-202ENST00000344204 MATR3P43243 847 aaKnown RBP eCLIP15.62■□□□□ 0.091e-6■■■□□ 18.5
TRIO-202ENST00000344204 ALDH1L2Q3SY69 923 aa15.62■□□□□ 0.09
TRIO-202ENST00000344204 NAIPQ13075 1403 aa15.62■□□□□ 0.09
TRIO-202ENST00000344204 FKBP15Q5T1M5 1219 aa15.62■□□□□ 0.09
TRIO-202ENST00000344204 ANKRD36BQ8N2N9 1353 aa15.62■□□□□ 0.09
TRIO-202ENST00000344204 TANGO6Q9C0B7 1094 aa15.62■□□□□ 0.09
TRIO-202ENST00000344204 HNRNPMP52272 730 aaKnown RBP eCLIP15.62■□□□□ 0.099e-7■■■□□ 18.1
TRIO-202ENST00000344204 AOPEPQ8N6M6 819 aa15.62■□□□□ 0.09
TRIO-202ENST00000344204 SAMD15Q9P1V8 674 aa15.62■□□□□ 0.09
TRIO-202ENST00000344204 IRX5P78411 483 aaPredicted RBP15.61■□□□□ 0.09
TRIO-202ENST00000344204 TUBB2AQ13885 445 aa15.61■□□□□ 0.09
TRIO-202ENST00000344204 ZNF365Q70YC5 407 aa15.61■□□□□ 0.09
TRIO-202ENST00000344204 TUBB2BQ9BVA1 445 aa15.61■□□□□ 0.09
TRIO-202ENST00000344204 ZNF75DP51815 510 aa15.61■□□□□ 0.09
TRIO-202ENST00000344204 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.61■□□□□ 0.092e-6■■■■■ 149.1
TRIO-202ENST00000344204 PRPF40BQ6NWY9 871 aaKnown RBP15.61■□□□□ 0.09
TRIO-202ENST00000344204 GTF2E1P29083 439 aaPredicted RBP15.61■□□□□ 0.09
TRIO-202ENST00000344204 SLC8A1P32418 973 aa15.61■□□□□ 0.09
TRIO-202ENST00000344204 ARFGAP2Q8N6H7 521 aa15.61■□□□□ 0.09
TRIO-202ENST00000344204 EIF2AK4Q9P2K8 1649 aaKnown RBP15.61■□□□□ 0.09
TRIO-202ENST00000344204 KIF14Q15058 1648 aa15.61■□□□□ 0.09
TRIO-202ENST00000344204 CAMSAP2Q08AD1 1489 aa15.61■□□□□ 0.09
TRIO-202ENST00000344204 AMOTL1Q8IY63 956 aa15.6■□□□□ 0.09
TRIO-202ENST00000344204 SIL1Q9H173 461 aa15.6■□□□□ 0.09
TRIO-202ENST00000344204 CCDC38Q502W7 563 aa15.6■□□□□ 0.09
TRIO-202ENST00000344204 WASF1Q92558 559 aa15.6■□□□□ 0.09
TRIO-202ENST00000344204 TRIM4Q9C037 500 aa15.6■□□□□ 0.09
TRIO-202ENST00000344204 SMARCA5O60264 1052 aaPredicted RBP15.6■□□□□ 0.09
TRIO-202ENST00000344204 TRIM27P14373 513 aa15.6■□□□□ 0.09
TRIO-202ENST00000344204 RLBP1P12271 317 aa15.6■□□□□ 0.09
TRIO-202ENST00000344204 TEFQ10587 303 aa15.6■□□□□ 0.09
TRIO-202ENST00000344204 VPS36Q86VN1 386 aa15.6■□□□□ 0.09
TRIO-202ENST00000344204 EFCAB13Q8IY85 973 aa15.6■□□□□ 0.09
TRIO-202ENST00000344204 FAM184BQ9ULE4 1060 aa15.6■□□□□ 0.09
TRIO-202ENST00000344204 LUC7L3O95232 432 aaKnown RBP15.6■□□□□ 0.09
TRIO-202ENST00000344204 LUC7L2Q9Y383 392 aaKnown RBP15.6■□□□□ 0.09
TRIO-202ENST00000344204 CAPN7Q9Y6W3 813 aa15.6■□□□□ 0.09
TRIO-202ENST00000344204 CCDC155Q8N6L0 562 aa15.59■□□□□ 0.09
TRIO-202ENST00000344204 LTV1Q96GA3 475 aaPredicted RBP15.59■□□□□ 0.09
TRIO-202ENST00000344204 C1orf141Q5JVX7 400 aa15.59■□□□□ 0.09
TRIO-202ENST00000344204 CEP128Q6ZU80 1094 aa15.59■□□□□ 0.09
TRIO-202ENST00000344204 CPLX3Q8WVH0 158 aa15.59■□□□□ 0.09
TRIO-202ENST00000344204 TTC14Q96N46 770 aa15.59■□□□□ 0.09
TRIO-202ENST00000344204 KDM2BQ8NHM5 1336 aa15.59■□□□□ 0.09
TRIO-202ENST00000344204 DNA2P51530 1060 aa15.59■□□□□ 0.09
TRIO-202ENST00000344204 RAB11FIP3O75154 756 aa15.59■□□□□ 0.09
TRIO-202ENST00000344204 NUTM1Q86Y26 1132 aa15.59■□□□□ 0.09
TRIO-202ENST00000344204 C8orf76Q96K31 380 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms