RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 CEBPZQ03701 1054 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-201ENST00000341394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.65□□□□□ -0.382e-7■■□□□ 13.8
CAPRIN1-201ENST00000341394 TNPO1Q92973 898 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-201ENST00000341394 PCDH11XQ9BZA7 1347 aa12.65□□□□□ -0.38
CAPRIN1-201ENST00000341394 PCDH11YQ9BZA8 1340 aa12.65□□□□□ -0.38
CAPRIN1-201ENST00000341394 PPFIA3O75145 1194 aa12.64□□□□□ -0.39
CAPRIN1-201ENST00000341394 CACNA1FO60840 1977 aa12.64□□□□□ -0.39
CAPRIN1-201ENST00000341394 ABCC6O95255 1503 aa12.64□□□□□ -0.39
CAPRIN1-201ENST00000341394 PIP4K2AP48426 406 aaPredicted RBP12.64□□□□□ -0.39
CAPRIN1-201ENST00000341394 ARHGAP45Q92619 1136 aa12.64□□□□□ -0.39
CAPRIN1-201ENST00000341394 SLC52A2Q9HAB3 445 aa12.64□□□□□ -0.39
CAPRIN1-201ENST00000341394 MYL6BP14649 208 aa12.64□□□□□ -0.39
CAPRIN1-201ENST00000341394 ZNF771Q7L3S4 317 aaPredicted RBP12.64□□□□□ -0.39
CAPRIN1-201ENST00000341394 ZNF830Q96NB3 372 aaPredicted RBP12.64□□□□□ -0.39
CAPRIN1-201ENST00000341394 BABAM1Q9NWV8 329 aa12.64□□□□□ -0.39
CAPRIN1-201ENST00000341394 OVOS2A0A0G2JMS6 1433 aa12.64□□□□□ -0.39
CAPRIN1-201ENST00000341394 TOGARAM1Q9Y4F4 1720 aa12.64□□□□□ -0.39
CAPRIN1-201ENST00000341394 FLIIQ13045 1269 aa12.64□□□□□ -0.39
CAPRIN1-201ENST00000341394 MEIS3Q99687 375 aa12.64□□□□□ -0.39
CAPRIN1-201ENST00000341394 CHPF2Q9P2E5 772 aa12.64□□□□□ -0.39
CAPRIN1-201ENST00000341394 GLI3P10071 1580 aa12.63□□□□□ -0.39
CAPRIN1-201ENST00000341394 TMOD3Q9NYL9 352 aa12.63□□□□□ -0.39
CAPRIN1-201ENST00000341394 SKOR2Q2VWA4 1001 aaPredicted RBP12.63□□□□□ -0.39
CAPRIN1-201ENST00000341394 SYAP1Q96A49 352 aaPredicted RBP12.63□□□□□ -0.39
CAPRIN1-201ENST00000341394 PARP4Q9UKK3 1724 aaKnown RBP12.63□□□□□ -0.39
CAPRIN1-201ENST00000341394 ZNF790Q6PG37 636 aa12.63□□□□□ -0.39
CAPRIN1-201ENST00000341394 AAMPQ13685 434 aa12.62□□□□□ -0.39
CAPRIN1-201ENST00000341394 CHAMP1Q96JM3 812 aa12.62□□□□□ -0.39
CAPRIN1-201ENST00000341394 IL1RAPL2Q9NP60 686 aa12.62□□□□□ -0.39
CAPRIN1-201ENST00000341394 COL22A1Q8NFW1 1626 aaPredicted RBP12.62□□□□□ -0.39
CAPRIN1-201ENST00000341394 UQCRHLA0A096LP55 91 aa12.62□□□□□ -0.39
CAPRIN1-201ENST00000341394 UQCRHP07919 91 aa12.62□□□□□ -0.39
CAPRIN1-201ENST00000341394 FMNL2Q96PY5 1086 aa12.61□□□□□ -0.39
CAPRIN1-201ENST00000341394 HMMRO75330 724 aa12.61□□□□□ -0.39
CAPRIN1-201ENST00000341394 ATP10DQ9P241 1426 aa12.61□□□□□ -0.39
CAPRIN1-201ENST00000341394 HEG1Q9ULI3 1381 aa12.61□□□□□ -0.39
CAPRIN1-201ENST00000341394 EXOC6BQ9Y2D4 811 aa12.61□□□□□ -0.39
CAPRIN1-201ENST00000341394 PTPRCP08575 1304 aa12.61□□□□□ -0.39
CAPRIN1-201ENST00000341394 GIGYF1O75420 1035 aaPredicted RBP12.61□□□□□ -0.39
CAPRIN1-201ENST00000341394 DDB1Q16531 1140 aa12.61□□□□□ -0.39
CAPRIN1-201ENST00000341394 DBF4Q9UBU7 674 aaPredicted RBP12.61□□□□□ -0.39
CAPRIN1-201ENST00000341394 PLCH1Q4KWH8 1693 aa12.61□□□□□ -0.39
CAPRIN1-201ENST00000341394 SKIDA1Q1XH10 827 aa12.6□□□□□ -0.39
CAPRIN1-201ENST00000341394 INTS3Q68E01 1043 aaKnown RBP12.6□□□□□ -0.39
CAPRIN1-201ENST00000341394 CHD1LQ86WJ1 897 aa12.6□□□□□ -0.39
CAPRIN1-201ENST00000341394 ZNF496Q96IT1 587 aaPredicted RBP12.6□□□□□ -0.39
CAPRIN1-201ENST00000341394 RIC3Q7Z5B4 369 aa12.6□□□□□ -0.39
CAPRIN1-201ENST00000341394 DDX58O95786 925 aaKnown RBP12.6□□□□□ -0.39
CAPRIN1-201ENST00000341394 CBX1P83916 185 aa12.6□□□□□ -0.39
CAPRIN1-201ENST00000341394 FERMT3Q86UX7 667 aa12.6□□□□□ -0.39
CAPRIN1-201ENST00000341394 CDC45O75419 566 aa12.59□□□□□ -0.39
CAPRIN1-201ENST00000341394 SNRPA1P09661 255 aaKnown RBP12.59□□□□□ -0.39
CAPRIN1-201ENST00000341394 CCT4P50991 539 aaKnown RBP12.59□□□□□ -0.39
CAPRIN1-201ENST00000341394 K7ELQ4 463 aaPredicted RBP12.59□□□□□ -0.39
CAPRIN1-201ENST00000341394 STK3Q13188 491 aa12.59□□□□□ -0.39
CAPRIN1-201ENST00000341394 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.59□□□□□ -0.39
CAPRIN1-201ENST00000341394 MRC1P22897 1456 aa12.58□□□□□ -0.39
CAPRIN1-201ENST00000341394 GNL2Q13823 731 aaKnown RBP12.58□□□□□ -0.4
CAPRIN1-201ENST00000341394 ACSBG1Q96GR2 724 aa12.58□□□□□ -0.4
CAPRIN1-201ENST00000341394 TRERF1Q96PN7 1200 aa12.58□□□□□ -0.4
CAPRIN1-201ENST00000341394 PI4KAP2A4QPH2 592 aa12.58□□□□□ -0.4
CAPRIN1-201ENST00000341394 HDAC1Q13547 482 aaPredicted RBP12.58□□□□□ -0.4
CAPRIN1-201ENST00000341394 FAM98CQ17RN3 349 aaKnown RBP12.58□□□□□ -0.4
CAPRIN1-201ENST00000341394 PI4KAP1Q8N8J0 262 aa12.58□□□□□ -0.4
CAPRIN1-201ENST00000341394 C9orf78Q9NZ63 289 aaPredicted RBP12.58□□□□□ -0.4
CAPRIN1-201ENST00000341394 USP16Q9Y5T5 823 aa12.58□□□□□ -0.4
CAPRIN1-201ENST00000341394 N4BP2Q86UW6 1770 aaPredicted RBP12.58□□□□□ -0.4
CAPRIN1-201ENST00000341394 COL14A1Q05707 1796 aaKnown RBP12.58□□□□□ -0.4
CAPRIN1-201ENST00000341394 PDIA6Q15084 440 aa12.58□□□□□ -0.4
CAPRIN1-201ENST00000341394 C16orf71Q8IYS4 520 aaPredicted RBP12.58□□□□□ -0.4
CAPRIN1-201ENST00000341394 BICD2Q8TD16 824 aa12.58□□□□□ -0.4
CAPRIN1-201ENST00000341394 PDE4CQ08493 712 aa12.57□□□□□ -0.4
CAPRIN1-201ENST00000341394 REC8O95072 547 aa12.57□□□□□ -0.4
CAPRIN1-201ENST00000341394 SRCIN1Q9C0H9 1055 aa12.57□□□□□ -0.4
CAPRIN1-201ENST00000341394 ADCY9O60503 1353 aa12.57□□□□□ -0.4
CAPRIN1-201ENST00000341394 ITGB4P16144 1822 aa12.57□□□□□ -0.4
CAPRIN1-201ENST00000341394 HSPA1LP34931 641 aa12.57□□□□□ -0.4
CAPRIN1-201ENST00000341394 NEXNQ0ZGT2 675 aa12.57□□□□□ -0.4
CAPRIN1-201ENST00000341394 GORABQ5T7V8 394 aa12.57□□□□□ -0.4
CAPRIN1-201ENST00000341394 NRAPQ86VF7 1730 aa12.57□□□□□ -0.4
CAPRIN1-201ENST00000341394 SMC5Q8IY18 1101 aa12.56□□□□□ -0.4
CAPRIN1-201ENST00000341394 USP21Q9UK80 565 aa12.56□□□□□ -0.4
CAPRIN1-201ENST00000341394 SPDYE4A6NLX3 237 aa12.56□□□□□ -0.4
CAPRIN1-201ENST00000341394 SOS1Q07889 1333 aaPredicted RBP12.56□□□□□ -0.4
CAPRIN1-201ENST00000341394 ERVV-2B6SEH9 535 aa12.56□□□□□ -0.4
CAPRIN1-201ENST00000341394 HOXB7P09629 217 aa12.56□□□□□ -0.4
CAPRIN1-201ENST00000341394 NUCB2P80303 420 aa12.56□□□□□ -0.4
CAPRIN1-201ENST00000341394 HYPKQ9NX55 129 aa12.56□□□□□ -0.4
CAPRIN1-201ENST00000341394 UBTFL1P0CB47 393 aaPredicted RBP12.56□□□□□ -0.4
CAPRIN1-201ENST00000341394 DNAAF4Q8WXU2 420 aa12.56□□□□□ -0.4
CAPRIN1-201ENST00000341394 DIAPH3Q9NSV4 1193 aa12.56□□□□□ -0.4
CAPRIN1-201ENST00000341394 BECN2A8MW95 431 aa12.55□□□□□ -0.4
CAPRIN1-201ENST00000341394 CAMK4Q16566 473 aa12.55□□□□□ -0.4
CAPRIN1-201ENST00000341394 TSC1Q92574 1164 aa12.55□□□□□ -0.4
CAPRIN1-201ENST00000341394 TBC1D32Q96NH3 1257 aa12.55□□□□□ -0.4
CAPRIN1-201ENST00000341394 UBR2Q8IWV8 1755 aa12.55□□□□□ -0.4
CAPRIN1-201ENST00000341394 JCADQ9P266 1359 aa12.55□□□□□ -0.4
CAPRIN1-201ENST00000341394 WNK3Q9BYP7 1800 aa12.55□□□□□ -0.4
CAPRIN1-201ENST00000341394 GNAI3P08754 354 aa12.55□□□□□ -0.4
CAPRIN1-201ENST00000341394 SMC3Q9UQE7 1217 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms