RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 CHD4Q14839 1912 aa29.22■■■□□ 2.27
PBX1-201ENST00000340699 ERVV-1B6SEH8 477 aa29.22■■■□□ 2.27
PBX1-201ENST00000340699 PIM2Q9P1W9 311 aa29.22■■■□□ 2.27
PBX1-201ENST00000340699 BCS1LQ9Y276 419 aa29.22■■■□□ 2.27
PBX1-201ENST00000340699 MAP3K15Q6ZN16 1313 aa29.21■■■□□ 2.27
PBX1-201ENST00000340699 TTLL7Q6ZT98 887 aa29.21■■■□□ 2.27
PBX1-201ENST00000340699 WWC1Q8IX03 1113 aa29.21■■■□□ 2.27
PBX1-201ENST00000340699 NIP7Q9Y221 180 aaKnown RBP eCLIP29.21■■■□□ 2.27
PBX1-201ENST00000340699 PDIA6Q15084 440 aa29.2■■■□□ 2.26
PBX1-201ENST00000340699 HLFQ16534 295 aa29.2■■■□□ 2.26
PBX1-201ENST00000340699 HDGFL1Q5TGJ6 251 aa29.2■■■□□ 2.26
PBX1-201ENST00000340699 DUSP27Q5VZP5 1158 aa29.2■■■□□ 2.26
PBX1-201ENST00000340699 CNBD1Q8NA66 436 aa29.2■■■□□ 2.26
PBX1-201ENST00000340699 KCNA3P22001 575 aa29.19■■■□□ 2.26
PBX1-201ENST00000340699 CHRNA5P30532 468 aa29.19■■■□□ 2.26
PBX1-201ENST00000340699 PRR5LQ6MZQ0 368 aa29.19■■■□□ 2.26
PBX1-201ENST00000340699 NBPF5PQ86XG9 351 aaPredicted RBP29.19■■■□□ 2.26
PBX1-201ENST00000340699 ST5P78524 1137 aa29.18■■■□□ 2.26
PBX1-201ENST00000340699 ZBTB3Q9H5J0 574 aa29.18■■■□□ 2.26
PBX1-201ENST00000340699 DDX21Q9NR30 783 aaKnown RBP eCLIP29.18■■■□□ 2.26
PBX1-201ENST00000340699 SALL2Q9Y467 1007 aaPredicted RBP29.18■■■□□ 2.26
PBX1-201ENST00000340699 ANXA1P04083 346 aa29.17■■■□□ 2.26
PBX1-201ENST00000340699 PROSER3Q2NL68 480 aa29.17■■■□□ 2.26
PBX1-201ENST00000340699 BRIP1Q9BX63 1249 aa29.17■■■□□ 2.26
PBX1-201ENST00000340699 H0YIN7 160 aa29.16■■■□□ 2.26
PBX1-201ENST00000340699 PDE6BP35913 854 aa29.16■■■□□ 2.26
PBX1-201ENST00000340699 DALRD3Q5D0E6 543 aaKnown RBP29.16■■■□□ 2.26
PBX1-201ENST00000340699 TPTE2Q6XPS3 522 aa29.16■■■□□ 2.26
PBX1-201ENST00000340699 PDZRN3Q9UPQ7 1066 aa29.16■■■□□ 2.26
PBX1-201ENST00000340699 LRP10Q7Z4F1 713 aa29.15■■■□□ 2.26
PBX1-201ENST00000340699 C2CD5Q86YS7 1000 aa29.15■■■□□ 2.26
PBX1-201ENST00000340699 CCDC24Q8N4L8 307 aa29.15■■■□□ 2.26
PBX1-201ENST00000340699 COPS6Q7L5N1 327 aa29.14■■■□□ 2.26
PBX1-201ENST00000340699 CHPF2Q9P2E5 772 aa29.14■■■□□ 2.26
PBX1-201ENST00000340699 DBF4Q9UBU7 674 aaPredicted RBP29.14■■■□□ 2.26
PBX1-201ENST00000340699 IL16Q14005 1332 aa29.14■■■□□ 2.25
PBX1-201ENST00000340699 NUP98P52948 1817 aa29.13■■■□□ 2.25
PBX1-201ENST00000340699 BRCA1P38398 1863 aaKnown RBP29.13■■■□□ 2.25
PBX1-201ENST00000340699 FAM177BA6PVY3 158 aa29.13■■■□□ 2.25
PBX1-201ENST00000340699 ELL2O00472 640 aaPredicted RBP29.13■■■□□ 2.25
PBX1-201ENST00000340699 AIMP1Q12904 312 aaKnown RBP29.13■■■□□ 2.25
PBX1-201ENST00000340699 CHMP4AQ9BY43 222 aa29.13■■■□□ 2.25
PBX1-201ENST00000340699 GTF2E1P29083 439 aaPredicted RBP29.12■■■□□ 2.25
PBX1-201ENST00000340699 GIGYF2Q6Y7W6 1299 aaKnown RBP29.12■■■□□ 2.25
PBX1-201ENST00000340699 XAGE3Q8WTP9 111 aa29.12■■■□□ 2.25
PBX1-201ENST00000340699 WDR63Q8IWG1 891 aa29.11■■■□□ 2.25
PBX1-201ENST00000340699 C8orf58Q8NAV2 365 aa29.1■■■□□ 2.25
PBX1-201ENST00000340699 TSR2Q969E8 191 aaKnown RBP29.1■■■□□ 2.25
PBX1-201ENST00000340699 NYXQ9GZU5 481 aa29.1■■■□□ 2.25
PBX1-201ENST00000340699 ATP10DQ9P241 1426 aa29.1■■■□□ 2.25
PBX1-201ENST00000340699 ARHGAP27Q6ZUM4 889 aa29.09■■■□□ 2.25
PBX1-201ENST00000340699 HYPKQ9NX55 129 aa29.09■■■□□ 2.25
PBX1-201ENST00000340699 GPTP24298 496 aa29.08■■■□□ 2.25
PBX1-201ENST00000340699 TTLL6Q8N841 843 aa29.08■■■□□ 2.25
PBX1-201ENST00000340699 ZNF622Q969S3 477 aaKnown RBP eCLIP29.08■■■□□ 2.25
PBX1-201ENST00000340699 ANKRD31Q8N7Z5 1873 aa29.08■■■□□ 2.25
PBX1-201ENST00000340699 CCER2I3L3R5 266 aa29.07■■■□□ 2.24
PBX1-201ENST00000340699 HSP90AB3PQ58FF7 597 aa29.07■■■□□ 2.24
PBX1-201ENST00000340699 ZNF34Q8IZ26 560 aa29.07■■■□□ 2.24
PBX1-201ENST00000340699 GOLGB1Q14789 3259 aaKnown RBP29.06■■■□□ 2.24
PBX1-201ENST00000340699 ARFGEF1Q9Y6D6 1849 aa29.06■■■□□ 2.24
PBX1-201ENST00000340699 UTRNP46939 3433 aa29.06■■■□□ 2.24
PBX1-201ENST00000340699 CCDC30Q5VVM6 783 aa29.05■■■□□ 2.24
PBX1-201ENST00000340699 DLEC1Q9Y238 1755 aa29.05■■■□□ 2.24
PBX1-201ENST00000340699 PARP10Q53GL7 1025 aa29.04■■■□□ 2.24
PBX1-201ENST00000340699 PPP1R42Q7Z4L9 355 aa29.04■■■□□ 2.24
PBX1-201ENST00000340699 UBN2Q6ZU65 1347 aa29.03■■■□□ 2.24
PBX1-201ENST00000340699 SUSD4Q5VX71 490 aa29.03■■■□□ 2.24
PBX1-201ENST00000340699 ANKRD13DQ6ZTN6 518 aa29.03■■■□□ 2.24
PBX1-201ENST00000340699 TSPYL6Q8N831 410 aa29.03■■■□□ 2.24
PBX1-201ENST00000340699 PLBD2Q8NHP8 589 aa29.02■■■□□ 2.24
PBX1-201ENST00000340699 MASTLQ96GX5 879 aa29.02■■■□□ 2.24
PBX1-201ENST00000340699 IBTKQ9P2D0 1353 aaPredicted RBP29.01■■■□□ 2.24
PBX1-201ENST00000340699 SRGNP10124 158 aa29.01■■■□□ 2.23
PBX1-201ENST00000340699 TCIRG1Q13488 830 aa29.01■■■□□ 2.23
PBX1-201ENST00000340699 TWISTNBQ3B726 338 aaPredicted RBP29.01■■■□□ 2.23
PBX1-201ENST00000340699 STYK1Q6J9G0 422 aa29.01■■■□□ 2.23
PBX1-201ENST00000340699 NUTM1Q86Y26 1132 aa29.01■■■□□ 2.23
PBX1-201ENST00000340699 ZNF784Q8NCA9 323 aaPredicted RBP29.01■■■□□ 2.23
PBX1-201ENST00000340699 CNKSR1Q969H4 720 aa29.01■■■□□ 2.23
PBX1-201ENST00000340699 DIEXFQ68CQ4 756 aaKnown RBP29■■■□□ 2.23
PBX1-201ENST00000340699 FANCIQ9NVI1 1328 aa28.99■■■□□ 2.23
PBX1-201ENST00000340699 GOLGA2Q08379 1002 aa28.99■■■□□ 2.23
PBX1-201ENST00000340699 ERFEQ4G0M1 354 aa28.99■■■□□ 2.23
PBX1-201ENST00000340699 UTP14AQ9BVJ6 771 aaKnown RBP28.99■■■□□ 2.23
PBX1-201ENST00000340699 STK31Q9BXU1 1019 aa28.99■■■□□ 2.23
PBX1-201ENST00000340699 KLRG2A4D1S0 409 aaPredicted RBP28.98■■■□□ 2.23
PBX1-201ENST00000340699 MYH16Q9H6N6 1097 aa28.98■■■□□ 2.23
PBX1-201ENST00000340699 COL11A2P13942 1736 aaPredicted RBP28.97■■■□□ 2.23
PBX1-201ENST00000340699 NTSR2O95665 410 aa28.97■■■□□ 2.23
PBX1-201ENST00000340699 NPR1P16066 1061 aa28.97■■■□□ 2.23
PBX1-201ENST00000340699 PHAXQ9H814 394 aaKnown RBP28.97■■■□□ 2.23
PBX1-201ENST00000340699 RIC3Q7Z5B4 369 aa28.96■■■□□ 2.23
PBX1-201ENST00000340699 ANKRD36CQ5JPF3 1778 aa28.96■■■□□ 2.23
PBX1-201ENST00000340699 NLRP10Q86W26 655 aa28.95■■■□□ 2.22
PBX1-201ENST00000340699 ABCC12Q96J65 1359 aa28.94■■■□□ 2.22
PBX1-201ENST00000340699 DDX58O95786 925 aaKnown RBP28.94■■■□□ 2.22
PBX1-201ENST00000340699 ZNF219Q9P2Y4 722 aaPredicted RBP28.94■■■□□ 2.22
PBX1-201ENST00000340699 RNF123Q5XPI4 1314 aa28.94■■■□□ 2.22
PBX1-201ENST00000340699 EXOSC9Q06265 439 aaKnown RBP28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms