RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 SPTY2D1Q68D10 685 aaPredicted RBP20.28■□□□□ 0.84
CDK11B-201ENST00000340677 C19orf44Q9H6X5 657 aa20.28■□□□□ 0.84
CDK11B-201ENST00000340677 ANKRD33BA6NCL7 494 aa20.28■□□□□ 0.84
CDK11B-201ENST00000340677 MYO1CO00159 1063 aa20.28■□□□□ 0.84
CDK11B-201ENST00000340677 CYP2C19P33261 490 aa20.28■□□□□ 0.84
CDK11B-201ENST00000340677 TRDNQ13061 729 aa20.28■□□□□ 0.84
CDK11B-201ENST00000340677 DEF6Q9H4E7 631 aa20.28■□□□□ 0.84
CDK11B-201ENST00000340677 NOLC1Q14978 699 aaKnown RBP eCLIP20.27■□□□□ 0.84
CDK11B-201ENST00000340677 PMFBP1Q8TBY8 1022 aa20.27■□□□□ 0.84
CDK11B-201ENST00000340677 DIAPH1O60610 1272 aaKnown RBP20.26■□□□□ 0.83
CDK11B-201ENST00000340677 E2F4Q16254 413 aa20.26■□□□□ 0.83
CDK11B-201ENST00000340677 MSL3Q8N5Y2 521 aaKnown RBP20.26■□□□□ 0.83
CDK11B-201ENST00000340677 ZSCAN26Q16670 478 aa20.26■□□□□ 0.83
CDK11B-201ENST00000340677 CRBNQ96SW2 442 aa20.26■□□□□ 0.83
CDK11B-201ENST00000340677 KIAA2012Q0VF49 1180 aa20.25■□□□□ 0.83
CDK11B-201ENST00000340677 UVSSAQ2YD98 709 aa20.25■□□□□ 0.83
CDK11B-201ENST00000340677 ILDR2Q71H61 639 aa20.25■□□□□ 0.83
CDK11B-201ENST00000340677 TBC1D22AQ8WUA7 517 aa20.25■□□□□ 0.83
CDK11B-201ENST00000340677 IRAK4Q9NWZ3 460 aa20.25■□□□□ 0.83
CDK11B-201ENST00000340677 ANAPC4Q9UJX5 808 aa20.25■□□□□ 0.83
CDK11B-201ENST00000340677 FAM163BP0C2L3 166 aa20.25■□□□□ 0.83
CDK11B-201ENST00000340677 CHAF1AQ13111 956 aaPredicted RBP20.25■□□□□ 0.83
CDK11B-201ENST00000340677 KIF24Q5T7B8 1368 aa20.25■□□□□ 0.83
CDK11B-201ENST00000340677 TTC19Q6DKK2 380 aaPredicted RBP20.24■□□□□ 0.83
CDK11B-201ENST00000340677 ZRANB1Q9UGI0 708 aa20.24■□□□□ 0.83
CDK11B-201ENST00000340677 TRPM3Q9HCF6 1732 aaPredicted RBP20.24■□□□□ 0.83
CDK11B-201ENST00000340677 SYT10Q6XYQ8 523 aa20.24■□□□□ 0.83
CDK11B-201ENST00000340677 TMEM94Q12767 1356 aa20.24■□□□□ 0.83
CDK11B-201ENST00000340677 C1orf167Q5SNV9 1468 aa20.24■□□□□ 0.83
CDK11B-201ENST00000340677 KRT222Q8N1A0 295 aa20.23■□□□□ 0.83
CDK11B-201ENST00000340677 ATG3Q9NT62 314 aa20.23■□□□□ 0.83
CDK11B-201ENST00000340677 MST1RQ04912 1400 aa20.23■□□□□ 0.83
CDK11B-201ENST00000340677 APAF1O14727 1248 aa20.22■□□□□ 0.83
CDK11B-201ENST00000340677 REC8O95072 547 aa20.22■□□□□ 0.83
CDK11B-201ENST00000340677 PRPF38AQ8NAV1 312 aaKnown RBP20.22■□□□□ 0.83
CDK11B-201ENST00000340677 PEAK1Q9H792 1746 aa20.22■□□□□ 0.83
CDK11B-201ENST00000340677 MAP2K2P36507 400 aa20.22■□□□□ 0.83
CDK11B-201ENST00000340677 CHMP5Q9NZZ3 219 aa20.22■□□□□ 0.83
CDK11B-201ENST00000340677 CCDC39Q9UFE4 941 aa20.22■□□□□ 0.83
CDK11B-201ENST00000340677 U2AF1L5P0DN76 240 aaPredicted RBP20.21■□□□□ 0.83
CDK11B-201ENST00000340677 U2AF1Q01081 240 aaKnown RBP eCLIP20.21■□□□□ 0.83
CDK11B-201ENST00000340677 CCDC146Q8IYE0 955 aa20.21■□□□□ 0.83
CDK11B-201ENST00000340677 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
CDK11B-201ENST00000340677 RGPD1P0DJD0 1748 aa20.21■□□□□ 0.83
CDK11B-201ENST00000340677 PHRF1Q9P1Y6 1649 aaKnown RBP20.21■□□□□ 0.83
CDK11B-201ENST00000340677 CCDC196A0A1B0GTZ2 297 aa20.2■□□□□ 0.82
CDK11B-201ENST00000340677 A0A1B0GUL7 405 aa20.2■□□□□ 0.82
CDK11B-201ENST00000340677 MUM1L1Q5H9M0 696 aa20.2■□□□□ 0.82
CDK11B-201ENST00000340677 GOLGA6L1Q8N7Z2 621 aa20.2■□□□□ 0.82
CDK11B-201ENST00000340677 SUDS3Q9H7L9 328 aaPredicted RBP20.2■□□□□ 0.82
CDK11B-201ENST00000340677 LCMT1Q9UIC8 334 aa20.2■□□□□ 0.82
CDK11B-201ENST00000340677 ZRSR2Q15696 482 aaKnown RBP20.2■□□□□ 0.82
CDK11B-201ENST00000340677 ERCC4Q92889 916 aaPredicted RBP20.2■□□□□ 0.82
CDK11B-201ENST00000340677 FCHSD2O94868 740 aa20.19■□□□□ 0.82
CDK11B-201ENST00000340677 SKILP12757 684 aa20.19■□□□□ 0.82
CDK11B-201ENST00000340677 SDR16C5Q8N3Y7 309 aa20.19■□□□□ 0.82
CDK11B-201ENST00000340677 EMILIN1Q9Y6C2 1016 aa20.19■□□□□ 0.82
CDK11B-201ENST00000340677 VIRMAQ69YN4 1812 aaKnown RBP20.19■□□□□ 0.82
CDK11B-201ENST00000340677 SSFA2P28290 1259 aa20.19■□□□□ 0.82
CDK11B-201ENST00000340677 GOLGA2Q08379 1002 aa20.19■□□□□ 0.82
CDK11B-201ENST00000340677 C20orf194Q5TEA3 1177 aa20.19■□□□□ 0.82
CDK11B-201ENST00000340677 MICALL1Q8N3F8 863 aa20.19■□□□□ 0.82
CDK11B-201ENST00000340677 ACRBPQ8NEB7 543 aa20.19■□□□□ 0.82
CDK11B-201ENST00000340677 ANKRD20A12PQ8NF67 263 aa20.19■□□□□ 0.82
CDK11B-201ENST00000340677 ECEL1O95672 775 aa20.18■□□□□ 0.82
CDK11B-201ENST00000340677 KLHL23Q8NBE8 558 aa20.18■□□□□ 0.82
CDK11B-201ENST00000340677 PLEKHF1Q96S99 279 aa20.18■□□□□ 0.82
CDK11B-201ENST00000340677 TBC1D2Q9BYX2 928 aa20.18■□□□□ 0.82
CDK11B-201ENST00000340677 IL13P35225 146 aa20.18■□□□□ 0.82
CDK11B-201ENST00000340677 ESCO1Q5FWF5 840 aa20.18■□□□□ 0.82
CDK11B-201ENST00000340677 MAF1Q9H063 256 aa20.18■□□□□ 0.82
CDK11B-201ENST00000340677 ABCD1P33897 745 aa20.17■□□□□ 0.82
CDK11B-201ENST00000340677 TRMT2AQ8IZ69 625 aaKnown RBP20.17■□□□□ 0.82
CDK11B-201ENST00000340677 RBM33Q96EV2 1170 aaKnown RBP20.17■□□□□ 0.82
CDK11B-201ENST00000340677 SBNO1A3KN83 1393 aa20.17■□□□□ 0.82
CDK11B-201ENST00000340677 CTIFO43310 598 aaKnown RBP20.17■□□□□ 0.82
CDK11B-201ENST00000340677 TCP11L2Q8N4U5 519 aa20.17■□□□□ 0.82
CDK11B-201ENST00000340677 ZNF232Q9UNY5 417 aa20.17■□□□□ 0.82
CDK11B-201ENST00000340677 MSH6P52701 1360 aa20.17■□□□□ 0.82
CDK11B-201ENST00000340677 ALS2Q96Q42 1657 aa20.16■□□□□ 0.82
CDK11B-201ENST00000340677 ATF3P18847 181 aa20.16■□□□□ 0.82
CDK11B-201ENST00000340677 TTC31Q49AM3 519 aaPredicted RBP20.16■□□□□ 0.82
CDK11B-201ENST00000340677 PACS2Q86VP3 889 aa20.16■□□□□ 0.82
CDK11B-201ENST00000340677 SPRYD3Q8NCJ5 442 aa20.16■□□□□ 0.82
CDK11B-201ENST00000340677 SKOR2Q2VWA4 1001 aaPredicted RBP20.16■□□□□ 0.82
CDK11B-201ENST00000340677 MFSD4BQ5TF39 518 aa20.16■□□□□ 0.82
CDK11B-201ENST00000340677 KIF18AQ8NI77 898 aa20.16■□□□□ 0.82
CDK11B-201ENST00000340677 U2SURPO15042 1029 aaKnown RBP20.15■□□□□ 0.82
CDK11B-201ENST00000340677 SLIT3O75094 1523 aa20.15■□□□□ 0.82
CDK11B-201ENST00000340677 LTN1O94822 1766 aa20.15■□□□□ 0.82
CDK11B-201ENST00000340677 FLT4P35916 1363 aa20.15■□□□□ 0.82
CDK11B-201ENST00000340677 SLFN5Q08AF3 891 aa20.15■□□□□ 0.82
CDK11B-201ENST00000340677 JAKMIP3Q5VZ66 844 aa20.15■□□□□ 0.82
CDK11B-201ENST00000340677 WDR63Q8IWG1 891 aa20.15■□□□□ 0.82
CDK11B-201ENST00000340677 RTL1A6NKG5 1358 aa20.14■□□□□ 0.82
CDK11B-201ENST00000340677 TPD52L2O43399 206 aaKnown RBP20.14■□□□□ 0.82
CDK11B-201ENST00000340677 PAX3P23760 479 aa20.14■□□□□ 0.82
CDK11B-201ENST00000340677 NFAT5O94916 1531 aa20.14■□□□□ 0.81
CDK11B-201ENST00000340677 PSME1Q06323 249 aa20.14■□□□□ 0.81
CDK11B-201ENST00000340677 NAIF1Q69YI7 327 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms