RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 IGSF3O75054 1194 aa17.32■□□□□ 0.36
RRP1B-201ENST00000340648 GSDMDP57764 484 aa17.32■□□□□ 0.36
RRP1B-201ENST00000340648 CCDC57Q2TAC2 916 aa17.32■□□□□ 0.36
RRP1B-201ENST00000340648 C17orf53Q8N3J3 647 aaPredicted RBP17.32■□□□□ 0.36
RRP1B-201ENST00000340648 TTC21BQ7Z4L5 1316 aa17.32■□□□□ 0.36
RRP1B-201ENST00000340648 KIF21AQ7Z4S6 1674 aa17.32■□□□□ 0.36
RRP1B-201ENST00000340648 RAD21O60216 631 aa17.32■□□□□ 0.36
RRP1B-201ENST00000340648 MAGEC2Q9UBF1 373 aaPredicted RBP17.32■□□□□ 0.36
RRP1B-201ENST00000340648 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.32■□□□□ 0.36
RRP1B-201ENST00000340648 MAP3K2Q9Y2U5 619 aa17.32■□□□□ 0.36
RRP1B-201ENST00000340648 RBM8AQ9Y5S9 174 aaKnown RBP17.32■□□□□ 0.36
RRP1B-201ENST00000340648 V9GYY5 206 aaPredicted RBP17.32■□□□□ 0.36
RRP1B-201ENST00000340648 CABP4P57796 275 aa17.31■□□□□ 0.36
RRP1B-201ENST00000340648 TYRO3Q06418 890 aa17.31■□□□□ 0.36
RRP1B-201ENST00000340648 DBF4Q9UBU7 674 aaPredicted RBP17.31■□□□□ 0.36
RRP1B-201ENST00000340648 SKILP12757 684 aa17.31■□□□□ 0.36
RRP1B-201ENST00000340648 ARHGAP29Q52LW3 1261 aa17.31■□□□□ 0.36
RRP1B-201ENST00000340648 LARP1Q6PKG0 1096 aaKnown RBP17.31■□□□□ 0.36
RRP1B-201ENST00000340648 ISM2Q6H9L7 571 aa17.31■□□□□ 0.36
RRP1B-201ENST00000340648 NEK1Q96PY6 1258 aa17.31■□□□□ 0.36
RRP1B-201ENST00000340648 PIP4K2AP48426 406 aaPredicted RBP17.3■□□□□ 0.36
RRP1B-201ENST00000340648 EIF4A2Q14240 407 aaKnown RBP17.3■□□□□ 0.36
RRP1B-201ENST00000340648 SYT1P21579 422 aa17.3■□□□□ 0.36
RRP1B-201ENST00000340648 NOL10Q9BSC4 688 aaKnown RBP17.3■□□□□ 0.36
RRP1B-201ENST00000340648 TMEM63CQ9P1W3 806 aa17.3■□□□□ 0.36
RRP1B-201ENST00000340648 SLC3A2P08195 630 aaKnown RBP17.3■□□□□ 0.36
RRP1B-201ENST00000340648 CPA1P15085 419 aa17.3■□□□□ 0.36
RRP1B-201ENST00000340648 GTF2F1P35269 517 aaKnown RBP eCLIP17.3■□□□□ 0.36
RRP1B-201ENST00000340648 TXLNAP40222 546 aa17.3■□□□□ 0.36
RRP1B-201ENST00000340648 HMGB1P09429 215 aaKnown RBP17.3■□□□□ 0.36
RRP1B-201ENST00000340648 FAM193AP78312 1265 aa17.3■□□□□ 0.36
RRP1B-201ENST00000340648 CASQ1P31415 396 aa17.29■□□□□ 0.36
RRP1B-201ENST00000340648 PUS7Q96PZ0 661 aaKnown RBP17.29■□□□□ 0.36
RRP1B-201ENST00000340648 LRRC2Q9BYS8 371 aa17.29■□□□□ 0.36
RRP1B-201ENST00000340648 EPB41L2O43491 1005 aaKnown RBP17.29■□□□□ 0.36
RRP1B-201ENST00000340648 CAVIN2O95810 425 aa17.29■□□□□ 0.36
RRP1B-201ENST00000340648 BRF1Q92994 677 aa17.29■□□□□ 0.36
RRP1B-201ENST00000340648 ZNHIT6Q9NWK9 470 aaKnown RBP17.29■□□□□ 0.36
RRP1B-201ENST00000340648 CCDC171Q6TFL3 1326 aa17.29■□□□□ 0.36
RRP1B-201ENST00000340648 KIF6Q6ZMV9 814 aa17.29■□□□□ 0.36
RRP1B-201ENST00000340648 CALCOCO1Q9P1Z2 691 aa17.29■□□□□ 0.36
RRP1B-201ENST00000340648 ACEP12821 1306 aa17.29■□□□□ 0.36
RRP1B-201ENST00000340648 POLR3DP05423 398 aaPredicted RBP17.28■□□□□ 0.36
RRP1B-201ENST00000340648 LUZP1Q86V48 1076 aa17.28■□□□□ 0.36
RRP1B-201ENST00000340648 KRT222Q8N1A0 295 aa17.28■□□□□ 0.36
RRP1B-201ENST00000340648 PKP1Q13835 747 aa17.28■□□□□ 0.36
RRP1B-201ENST00000340648 GADD45BO75293 160 aaPredicted RBP17.28■□□□□ 0.36
RRP1B-201ENST00000340648 IFIT1P09914 478 aaKnown RBP17.28■□□□□ 0.36
RRP1B-201ENST00000340648 IDH1O75874 414 aaKnown RBP17.28■□□□□ 0.36
RRP1B-201ENST00000340648 KLHL10Q6JEL2 608 aa17.28■□□□□ 0.36
RRP1B-201ENST00000340648 ZMYM3Q14202 1370 aa17.27■□□□□ 0.36
RRP1B-201ENST00000340648 FOXO3O43524 673 aa17.27■□□□□ 0.36
RRP1B-201ENST00000340648 GSPT1P15170 499 aaKnown RBP17.27■□□□□ 0.36
RRP1B-201ENST00000340648 GOLGA8BA8MQT2 603 aa17.27■□□□□ 0.36
RRP1B-201ENST00000340648 ZSCAN25Q6NSZ9 544 aa17.27■□□□□ 0.35
RRP1B-201ENST00000340648 RAB11FIP4Q86YS3 637 aa17.27■□□□□ 0.35
RRP1B-201ENST00000340648 PPP1R9BQ96SB3 815 aa17.27■□□□□ 0.35
RRP1B-201ENST00000340648 CHPF2Q9P2E5 772 aa17.27■□□□□ 0.35
RRP1B-201ENST00000340648 DTNBO60941 627 aa17.26■□□□□ 0.35
RRP1B-201ENST00000340648 G2E3Q7L622 706 aa17.26■□□□□ 0.35
RRP1B-201ENST00000340648 HMG20BQ9P0W2 317 aa17.26■□□□□ 0.35
RRP1B-201ENST00000340648 PTPRTO14522 1441 aa17.26■□□□□ 0.35
RRP1B-201ENST00000340648 NACAP1Q9BZK3 213 aa17.26■□□□□ 0.35
RRP1B-201ENST00000340648 TSPYL1Q9H0U9 437 aa17.26■□□□□ 0.35
RRP1B-201ENST00000340648 ZSCAN16Q9H4T2 348 aaPredicted RBP17.26■□□□□ 0.35
RRP1B-201ENST00000340648 BMS1Q14692 1282 aaKnown RBP17.26■□□□□ 0.35
RRP1B-201ENST00000340648 PPIP5K1Q6PFW1 1433 aa17.26■□□□□ 0.35
RRP1B-201ENST00000340648 MAST1Q9Y2H9 1570 aa17.26■□□□□ 0.35
RRP1B-201ENST00000340648 MTHFSDQ2M296 383 aaKnown RBP17.25■□□□□ 0.35
RRP1B-201ENST00000340648 CHAMP1Q96JM3 812 aa17.25■□□□□ 0.35
RRP1B-201ENST00000340648 G3V3G9 751 aa17.25■□□□□ 0.35
RRP1B-201ENST00000340648 GOLIM4O00461 696 aa17.25■□□□□ 0.35
RRP1B-201ENST00000340648 ATF3P18847 181 aa17.25■□□□□ 0.35
RRP1B-201ENST00000340648 KIF4BQ2VIQ3 1234 aa17.25■□□□□ 0.35
RRP1B-201ENST00000340648 DCAF8Q5TAQ9 597 aa17.25■□□□□ 0.35
RRP1B-201ENST00000340648 CD2BP2O95400 341 aaKnown RBP17.25■□□□□ 0.35
RRP1B-201ENST00000340648 CDR1P51861 262 aa17.25■□□□□ 0.35
RRP1B-201ENST00000340648 CPLX3Q8WVH0 158 aa17.25■□□□□ 0.35
RRP1B-201ENST00000340648 PIBF1Q8WXW3 757 aa17.25■□□□□ 0.35
RRP1B-201ENST00000340648 JARID2Q92833 1246 aaPredicted RBP17.25■□□□□ 0.35
RRP1B-201ENST00000340648 TRIM34Q9BYJ4 488 aa17.25■□□□□ 0.35
RRP1B-201ENST00000340648 PA2G4Q9UQ80 394 aaKnown RBP17.25■□□□□ 0.35
RRP1B-201ENST00000340648 ABCC2Q92887 1545 aa17.24■□□□□ 0.35
RRP1B-201ENST00000340648 AOPEPQ8N6M6 819 aa17.24■□□□□ 0.35
RRP1B-201ENST00000340648 CNNM3Q8NE01 707 aa17.24■□□□□ 0.35
RRP1B-201ENST00000340648 EPS15P42566 896 aa17.24■□□□□ 0.35
RRP1B-201ENST00000340648 SMAP1Q8IYB5 467 aaPredicted RBP17.24■□□□□ 0.35
RRP1B-201ENST00000340648 HYPKQ9NX55 129 aa17.24■□□□□ 0.35
RRP1B-201ENST00000340648 ZFYVE9O95405 1425 aa17.24■□□□□ 0.35
RRP1B-201ENST00000340648 ADGBQ8N7X0 1667 aa17.24■□□□□ 0.35
RRP1B-201ENST00000340648 KIF5CO60282 957 aa17.24■□□□□ 0.35
RRP1B-201ENST00000340648 TDO2P48775 406 aa17.24■□□□□ 0.35
RRP1B-201ENST00000340648 CCDC150Q8NCX0 1101 aa17.24■□□□□ 0.35
RRP1B-201ENST00000340648 TERF1P54274 439 aa17.24■□□□□ 0.35
RRP1B-201ENST00000340648 NMIQ13287 307 aaPredicted RBP17.24■□□□□ 0.35
RRP1B-201ENST00000340648 ZC3H6P61129 1189 aaKnown RBP17.23■□□□□ 0.35
RRP1B-201ENST00000340648 MYRIPQ8NFW9 859 aa17.23■□□□□ 0.35
RRP1B-201ENST00000340648 HAND2P61296 217 aa17.23■□□□□ 0.35
RRP1B-201ENST00000340648 DDX46Q7L014 1031 aaKnown RBP17.23■□□□□ 0.35
RRP1B-201ENST00000340648 THEMISQ8N1K5 641 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms