RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 RBM46Q8TBY0 533 aaKnown RBP20.11■□□□□ 0.81
VAPA-201ENST00000340541 NMRK2Q9NPI5 230 aa20.11■□□□□ 0.81
VAPA-201ENST00000340541 RNF181Q9P0P0 153 aa20.11■□□□□ 0.81
VAPA-201ENST00000340541 H0YIN7 160 aa20.1■□□□□ 0.81
VAPA-201ENST00000340541 KRT24Q2M2I5 525 aa20.1■□□□□ 0.81
VAPA-201ENST00000340541 DZIP3Q86Y13 1208 aaKnown RBP20.1■□□□□ 0.81
VAPA-201ENST00000340541 TTLL6Q8N841 843 aa20.1■□□□□ 0.81
VAPA-201ENST00000340541 LAS1LQ9Y4W2 734 aaKnown RBP20.1■□□□□ 0.81
VAPA-201ENST00000340541 CCDC27Q2M243 656 aa20.09■□□□□ 0.81
VAPA-201ENST00000340541 NPM2Q86SE8 214 aaKnown RBP20.09■□□□□ 0.81
VAPA-201ENST00000340541 C16orf71Q8IYS4 520 aaPredicted RBP20.09■□□□□ 0.81
VAPA-201ENST00000340541 MBIPQ9NS73 344 aa20.09■□□□□ 0.81
VAPA-201ENST00000340541 SBF1O95248 1867 aa20.08■□□□□ 0.81
VAPA-201ENST00000340541 TBC1D9BQ66K14 1250 aa20.08■□□□□ 0.81
VAPA-201ENST00000340541 IFT57Q9NWB7 429 aa20.08■□□□□ 0.81
VAPA-201ENST00000340541 ERBB4Q15303 1308 aa20.07■□□□□ 0.8
VAPA-201ENST00000340541 PDE6BP35913 854 aa20.07■□□□□ 0.8
VAPA-201ENST00000340541 FSTL1Q12841 308 aa20.07■□□□□ 0.8
VAPA-201ENST00000340541 PDIA6Q15084 440 aa20.07■□□□□ 0.8
VAPA-201ENST00000340541 NCBP3Q53F19 620 aaKnown RBP20.07■□□□□ 0.8
VAPA-201ENST00000340541 LRP10Q7Z4F1 713 aa20.07■□□□□ 0.8
VAPA-201ENST00000340541 C2CD5Q86YS7 1000 aa20.07■□□□□ 0.8
VAPA-201ENST00000340541 BRIP1Q9BX63 1249 aa20.07■□□□□ 0.8
VAPA-201ENST00000340541 LMNB1P20700 586 aa20.06■□□□□ 0.8
VAPA-201ENST00000340541 CALD1Q05682 793 aaKnown RBP20.06■□□□□ 0.8
VAPA-201ENST00000340541 WWC1Q8IX03 1113 aa20.06■□□□□ 0.8
VAPA-201ENST00000340541 DLEC1Q9Y238 1755 aa20.06■□□□□ 0.8
VAPA-201ENST00000340541 RGL2O15211 777 aa20.05■□□□□ 0.8
VAPA-201ENST00000340541 GNAI1P63096 354 aa20.05■□□□□ 0.8
VAPA-201ENST00000340541 BICDL1Q6ZP65 573 aa20.05■□□□□ 0.8
VAPA-201ENST00000340541 FAM9BQ8IZU0 186 aa20.05■□□□□ 0.8
VAPA-201ENST00000340541 MYL6BP14649 208 aa20.04■□□□□ 0.8
VAPA-201ENST00000340541 EIF2S2P20042 333 aaKnown RBP20.04■□□□□ 0.8
VAPA-201ENST00000340541 PROSER3Q2NL68 480 aa20.04■□□□□ 0.8
VAPA-201ENST00000340541 CLEC4GQ6UXB4 293 aa20.04■□□□□ 0.8
VAPA-201ENST00000340541 DNAJC5GQ8N7S2 189 aa20.04■□□□□ 0.8
VAPA-201ENST00000340541 SETDB2Q96T68 719 aa20.04■□□□□ 0.8
VAPA-201ENST00000340541 CARMIL3Q8ND23 1372 aa20.04■□□□□ 0.8
VAPA-201ENST00000340541 HOXB7P09629 217 aa20.03■□□□□ 0.8
VAPA-201ENST00000340541 IFFO2Q5TF58 517 aa20.03■□□□□ 0.8
VAPA-201ENST00000340541 TTLL7Q6ZT98 887 aa20.03■□□□□ 0.8
VAPA-201ENST00000340541 NGEFQ8N5V2 710 aa20.03■□□□□ 0.8
VAPA-201ENST00000340541 RRAGCQ9HB90 399 aa20.03■□□□□ 0.8
VAPA-201ENST00000340541 NUP98P52948 1817 aa20.02■□□□□ 0.8
VAPA-201ENST00000340541 HLFQ16534 295 aa20.02■□□□□ 0.8
VAPA-201ENST00000340541 PRR5LQ6MZQ0 368 aa20.02■□□□□ 0.8
VAPA-201ENST00000340541 ANKRD31Q8N7Z5 1873 aa20.02■□□□□ 0.8
VAPA-201ENST00000340541 GLTPD2A6NH11 291 aa20.01■□□□□ 0.79
VAPA-201ENST00000340541 ANXA1P04083 346 aa20.01■□□□□ 0.79
VAPA-201ENST00000340541 DUSP27Q5VZP5 1158 aa20.01■□□□□ 0.79
VAPA-201ENST00000340541 NECTIN2Q92692 538 aa20.01■□□□□ 0.79
VAPA-201ENST00000340541 MAP3K15Q6ZN16 1313 aa20.01■□□□□ 0.79
VAPA-201ENST00000340541 ERVV-1B6SEH8 477 aa20■□□□□ 0.79
VAPA-201ENST00000340541 RASSF7Q02833 373 aa20■□□□□ 0.79
VAPA-201ENST00000340541 ZNF652Q9Y2D9 606 aa20■□□□□ 0.79
VAPA-201ENST00000340541 TNRC6CQ9HCJ0 1690 aaKnown RBP20■□□□□ 0.79
VAPA-201ENST00000340541 VEGFAP15692 232 aaPredicted RBP19.99■□□□□ 0.79
VAPA-201ENST00000340541 C8orf58Q8NAV2 365 aa19.99■□□□□ 0.79
VAPA-201ENST00000340541 ZNF622Q969S3 477 aaKnown RBP eCLIP19.99■□□□□ 0.793e-8■■■□□ 15.1
VAPA-201ENST00000340541 DDX21Q9NR30 783 aaKnown RBP eCLIP19.99■□□□□ 0.79
VAPA-201ENST00000340541 IL16Q14005 1332 aa19.99■□□□□ 0.79
VAPA-201ENST00000340541 CCER2I3L3R5 266 aa19.98■□□□□ 0.79
VAPA-201ENST00000340541 ST5P78524 1137 aa19.98■□□□□ 0.79
VAPA-201ENST00000340541 HDGFL1Q5TGJ6 251 aa19.98■□□□□ 0.79
VAPA-201ENST00000340541 STYK1Q6J9G0 422 aa19.98■□□□□ 0.79
VAPA-201ENST00000340541 CNBD1Q8NA66 436 aa19.98■□□□□ 0.79
VAPA-201ENST00000340541 SMC1BQ8NDV3 1235 aa19.98■□□□□ 0.79
VAPA-201ENST00000340541 TSR2Q969E8 191 aaKnown RBP19.98■□□□□ 0.79
VAPA-201ENST00000340541 CNKSR1Q969H4 720 aa19.98■□□□□ 0.79
VAPA-201ENST00000340541 CHPF2Q9P2E5 772 aa19.98■□□□□ 0.79
VAPA-201ENST00000340541 NFKBIEO00221 500 aa19.97■□□□□ 0.79
VAPA-201ENST00000340541 PRELPP51888 382 aa19.97■□□□□ 0.79
VAPA-201ENST00000340541 DPY19L2Q6NUT2 758 aa19.97■□□□□ 0.79
VAPA-201ENST00000340541 KIF6Q6ZMV9 814 aa19.97■□□□□ 0.79
VAPA-201ENST00000340541 ZBTB3Q9H5J0 574 aa19.97■□□□□ 0.79
VAPA-201ENST00000340541 NIP7Q9Y221 180 aaKnown RBP eCLIP19.97■□□□□ 0.79
VAPA-201ENST00000340541 SALL2Q9Y467 1007 aaPredicted RBP19.97■□□□□ 0.79
VAPA-201ENST00000340541 LTBP3Q9NS15 1303 aa19.97■□□□□ 0.79
VAPA-201ENST00000340541 NPHP1O15259 732 aa19.96■□□□□ 0.79
VAPA-201ENST00000340541 SRGNP10124 158 aa19.96■□□□□ 0.79
VAPA-201ENST00000340541 SOGA3Q5TF21 947 aa19.96■□□□□ 0.79
VAPA-201ENST00000340541 WDR63Q8IWG1 891 aa19.96■□□□□ 0.79
VAPA-201ENST00000340541 CCDC24Q8N4L8 307 aa19.96■□□□□ 0.79
VAPA-201ENST00000340541 ELL2O00472 640 aaPredicted RBP19.95■□□□□ 0.78
VAPA-201ENST00000340541 C21orf2O43822 256 aa19.95■□□□□ 0.78
VAPA-201ENST00000340541 COPS6Q7L5N1 327 aa19.95■□□□□ 0.78
VAPA-201ENST00000340541 TSPYL6Q8N831 410 aa19.95■□□□□ 0.78
VAPA-201ENST00000340541 XAGE3Q8WTP9 111 aa19.95■□□□□ 0.78
VAPA-201ENST00000340541 MASTLQ96GX5 879 aa19.95■□□□□ 0.78
VAPA-201ENST00000340541 COL11A2P13942 1736 aaPredicted RBP19.95■□□□□ 0.78
VAPA-201ENST00000340541 GIGYF2Q6Y7W6 1299 aaKnown RBP19.94■□□□□ 0.78
VAPA-201ENST00000340541 DBF4Q9UBU7 674 aaPredicted RBP19.94■□□□□ 0.78
VAPA-201ENST00000340541 CCDC88AQ3V6T2 1871 aa19.93■□□□□ 0.78
VAPA-201ENST00000340541 TPTE2Q6XPS3 522 aa19.93■□□□□ 0.78
VAPA-201ENST00000340541 NBPF5PQ86XG9 351 aaPredicted RBP19.93■□□□□ 0.78
VAPA-201ENST00000340541 ZNF34Q8IZ26 560 aa19.93■□□□□ 0.78
VAPA-201ENST00000340541 SPINK5Q9NQ38 1064 aaPredicted RBP19.93■□□□□ 0.78
VAPA-201ENST00000340541 UBN2Q6ZU65 1347 aa19.93■□□□□ 0.78
VAPA-201ENST00000340541 ZNF521Q96K83 1311 aa19.93■□□□□ 0.78
VAPA-201ENST00000340541 ANKRD36CQ5JPF3 1778 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms