RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 LRP10Q7Z4F1 713 aa19.94■□□□□ 0.78
PRKN-201ENST00000338468 NPM2Q86SE8 214 aaKnown RBP19.94■□□□□ 0.78
PRKN-201ENST00000338468 NMRK2Q9NPI5 230 aa19.93■□□□□ 0.78
PRKN-201ENST00000338468 MBIPQ9NS73 344 aa19.93■□□□□ 0.78
PRKN-201ENST00000338468 ERBB4Q15303 1308 aa19.93■□□□□ 0.78
PRKN-201ENST00000338468 MYL6BP14649 208 aa19.92■□□□□ 0.78
PRKN-201ENST00000338468 EIF2S2P20042 333 aaKnown RBP19.92■□□□□ 0.78
PRKN-201ENST00000338468 HLFQ16534 295 aa19.92■□□□□ 0.78
PRKN-201ENST00000338468 PROSER3Q2NL68 480 aa19.92■□□□□ 0.78
PRKN-201ENST00000338468 CLEC4GQ6UXB4 293 aa19.92■□□□□ 0.78
PRKN-201ENST00000338468 TTLL7Q6ZT98 887 aa19.92■□□□□ 0.78
PRKN-201ENST00000338468 DNAJC5GQ8N7S2 189 aa19.92■□□□□ 0.78
PRKN-201ENST00000338468 WDR90Q96KV7 1748 aa19.92■□□□□ 0.78
PRKN-201ENST00000338468 RGL2O15211 777 aa19.91■□□□□ 0.78
PRKN-201ENST00000338468 CHRNA5P30532 468 aa19.91■□□□□ 0.78
PRKN-201ENST00000338468 C16orf71Q8IYS4 520 aaPredicted RBP19.91■□□□□ 0.78
PRKN-201ENST00000338468 NGEFQ8N5V2 710 aa19.91■□□□□ 0.78
PRKN-201ENST00000338468 IFT57Q9NWB7 429 aa19.91■□□□□ 0.78
PRKN-201ENST00000338468 CCDC27Q2M243 656 aa19.9■□□□□ 0.78
PRKN-201ENST00000338468 PRR5LQ6MZQ0 368 aa19.9■□□□□ 0.78
PRKN-201ENST00000338468 RBM46Q8TBY0 533 aaKnown RBP19.9■□□□□ 0.78
PRKN-201ENST00000338468 SETDB2Q96T68 719 aa19.9■□□□□ 0.78
PRKN-201ENST00000338468 ARFGEF1Q9Y6D6 1849 aa19.9■□□□□ 0.78
PRKN-201ENST00000338468 ANKRD31Q8N7Z5 1873 aa19.9■□□□□ 0.78
PRKN-201ENST00000338468 ANXA1P04083 346 aa19.89■□□□□ 0.77
PRKN-201ENST00000338468 C9orf131Q5VYM1 1079 aa19.89■□□□□ 0.77
PRKN-201ENST00000338468 WWC1Q8IX03 1113 aa19.89■□□□□ 0.77
PRKN-201ENST00000338468 NECTIN2Q92692 538 aa19.89■□□□□ 0.77
PRKN-201ENST00000338468 MAP3K15Q6ZN16 1313 aa19.88■□□□□ 0.77
PRKN-201ENST00000338468 ERVV-1B6SEH8 477 aa19.88■□□□□ 0.77
PRKN-201ENST00000338468 GNAI1P63096 354 aa19.88■□□□□ 0.77
PRKN-201ENST00000338468 CALD1Q05682 793 aaKnown RBP19.88■□□□□ 0.77
PRKN-201ENST00000338468 CCDC24Q8N4L8 307 aa19.88■□□□□ 0.77
PRKN-201ENST00000338468 ZNF652Q9Y2D9 606 aa19.88■□□□□ 0.77
PRKN-201ENST00000338468 KDM2BQ8NHM5 1336 aa19.87■□□□□ 0.77
PRKN-201ENST00000338468 NCBP3Q53F19 620 aaKnown RBP19.87■□□□□ 0.77
PRKN-201ENST00000338468 PIM2Q9P1W9 311 aa19.87■□□□□ 0.77
PRKN-201ENST00000338468 NUP98P52948 1817 aa19.87■□□□□ 0.77
PRKN-201ENST00000338468 DLEC1Q9Y238 1755 aa19.87■□□□□ 0.77
PRKN-201ENST00000338468 HOXB7P09629 217 aa19.86■□□□□ 0.77
PRKN-201ENST00000338468 DUSP27Q5VZP5 1158 aa19.86■□□□□ 0.77
PRKN-201ENST00000338468 NIP7Q9Y221 180 aaKnown RBP eCLIP19.86■□□□□ 0.77
PRKN-201ENST00000338468 FSTL1Q12841 308 aa19.85■□□□□ 0.77
PRKN-201ENST00000338468 DALRD3Q5D0E6 543 aaKnown RBP19.85■□□□□ 0.77
PRKN-201ENST00000338468 KIF6Q6ZMV9 814 aa19.85■□□□□ 0.77
PRKN-201ENST00000338468 FAM9BQ8IZU0 186 aa19.85■□□□□ 0.77
PRKN-201ENST00000338468 CNBD1Q8NA66 436 aa19.85■□□□□ 0.77
PRKN-201ENST00000338468 BRIP1Q9BX63 1249 aa19.85■□□□□ 0.77
PRKN-201ENST00000338468 ZBTB3Q9H5J0 574 aa19.85■□□□□ 0.77
PRKN-201ENST00000338468 DDX21Q9NR30 783 aaKnown RBP eCLIP19.85■□□□□ 0.778e-6■■□□□ 14
PRKN-201ENST00000338468 COL11A2P13942 1736 aaPredicted RBP19.85■□□□□ 0.77
PRKN-201ENST00000338468 C8orf58Q8NAV2 365 aa19.84■□□□□ 0.77
PRKN-201ENST00000338468 KLRG1Q96E93 195 aa19.84■□□□□ 0.77
PRKN-201ENST00000338468 CHPF2Q9P2E5 772 aa19.84■□□□□ 0.77
PRKN-201ENST00000338468 HDGFL1Q5TGJ6 251 aa19.83■□□□□ 0.77
PRKN-201ENST00000338468 C2CD5Q86YS7 1000 aa19.83■□□□□ 0.77
PRKN-201ENST00000338468 RNF181Q9P0P0 153 aa19.83■□□□□ 0.77
PRKN-201ENST00000338468 TNRC6CQ9HCJ0 1690 aaKnown RBP19.83■□□□□ 0.76
PRKN-201ENST00000338468 UBN2Q6ZU65 1347 aa19.82■□□□□ 0.76
PRKN-201ENST00000338468 GIGYF2Q6Y7W6 1299 aaKnown RBP19.82■□□□□ 0.76
PRKN-201ENST00000338468 COPS6Q7L5N1 327 aa19.82■□□□□ 0.76
PRKN-201ENST00000338468 NBPF5PQ86XG9 351 aaPredicted RBP19.82■□□□□ 0.76
PRKN-201ENST00000338468 XAGE3Q8WTP9 111 aa19.82■□□□□ 0.76
PRKN-201ENST00000338468 TSR2Q969E8 191 aaKnown RBP19.82■□□□□ 0.76
PRKN-201ENST00000338468 IL16Q14005 1332 aa19.81■□□□□ 0.76
PRKN-201ENST00000338468 ELL2O00472 640 aaPredicted RBP19.81■□□□□ 0.76
PRKN-201ENST00000338468 ZNF34Q8IZ26 560 aa19.81■□□□□ 0.76
PRKN-201ENST00000338468 SALL2Q9Y467 1007 aaPredicted RBP19.81■□□□□ 0.76
PRKN-201ENST00000338468 FAM177BA6PVY3 158 aa19.8■□□□□ 0.76
PRKN-201ENST00000338468 H0YIN7 160 aa19.8■□□□□ 0.76
PRKN-201ENST00000338468 PDE6BP35913 854 aa19.8■□□□□ 0.76
PRKN-201ENST00000338468 ST5P78524 1137 aa19.8■□□□□ 0.76
PRKN-201ENST00000338468 HTRA3P83110 453 aa19.8■□□□□ 0.76
PRKN-201ENST00000338468 TSPYL6Q8N831 410 aa19.8■□□□□ 0.76
PRKN-201ENST00000338468 JMYQ8N9B5 988 aa19.8■□□□□ 0.76
PRKN-201ENST00000338468 GPTP24298 496 aa19.79■□□□□ 0.76
PRKN-201ENST00000338468 AIMP1Q12904 312 aaKnown RBP19.79■□□□□ 0.76
PRKN-201ENST00000338468 TPTE2Q6XPS3 522 aa19.79■□□□□ 0.76
PRKN-201ENST00000338468 DBF4Q9UBU7 674 aaPredicted RBP19.79■□□□□ 0.76
PRKN-201ENST00000338468 KLRG2A4D1S0 409 aaPredicted RBP19.78■□□□□ 0.76
PRKN-201ENST00000338468 SUSD4Q5VX71 490 aa19.78■□□□□ 0.76
PRKN-201ENST00000338468 NPHP1O15259 732 aa19.77■□□□□ 0.76
PRKN-201ENST00000338468 SRGNP10124 158 aa19.77■□□□□ 0.76
PRKN-201ENST00000338468 WDR63Q8IWG1 891 aa19.77■□□□□ 0.76
PRKN-201ENST00000338468 TTLL6Q8N841 843 aa19.77■□□□□ 0.76
PRKN-201ENST00000338468 SMC1BQ8NDV3 1235 aa19.77■□□□□ 0.76
PRKN-201ENST00000338468 RRAGCQ9HB90 399 aa19.77■□□□□ 0.76
PRKN-201ENST00000338468 PDZRN3Q9UPQ7 1066 aa19.77■□□□□ 0.76
PRKN-201ENST00000338468 ABCC12Q96J65 1359 aa19.77■□□□□ 0.76
PRKN-201ENST00000338468 IBTKQ9P2D0 1353 aaPredicted RBP19.77■□□□□ 0.76
PRKN-201ENST00000338468 ZC3H4Q9UPT8 1303 aaKnown RBP19.76■□□□□ 0.75
PRKN-201ENST00000338468 ANKRD36CQ5JPF3 1778 aa19.76■□□□□ 0.75
PRKN-201ENST00000338468 NTSR2O95665 410 aa19.76■□□□□ 0.75
PRKN-201ENST00000338468 COL13A1Q5TAT6 717 aaPredicted RBP19.76■□□□□ 0.75
PRKN-201ENST00000338468 NUTM1Q86Y26 1132 aa19.76■□□□□ 0.75
PRKN-201ENST00000338468 SPINK5Q9NQ38 1064 aaPredicted RBP19.76■□□□□ 0.75
PRKN-201ENST00000338468 ERFEQ4G0M1 354 aa19.75■□□□□ 0.75
PRKN-201ENST00000338468 ZNF622Q969S3 477 aaKnown RBP eCLIP19.75■□□□□ 0.75
PRKN-201ENST00000338468 HYPKQ9NX55 129 aa19.75■□□□□ 0.75
PRKN-201ENST00000338468 FANCIQ9NVI1 1328 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms